RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 TSEN2Q8NCE0 465 aaKnown RBP7.76□□□□□ -1.17
HERC3-209ENST00000504994 HINFPQ9BQA5 517 aa7.76□□□□□ -1.17
HERC3-209ENST00000504994 TLL1O43897 1013 aa7.75□□□□□ -1.17
HERC3-209ENST00000504994 FKBP4Q02790 459 aaKnown RBP eCLIP7.75□□□□□ -1.17
HERC3-209ENST00000504994 GAS2L2Q8NHY3 880 aa7.75□□□□□ -1.17
HERC3-209ENST00000504994 EMP3P54852 163 aa7.74□□□□□ -1.17
HERC3-209ENST00000504994 COPS2P61201 443 aa7.74□□□□□ -1.17
HERC3-209ENST00000504994 C4orf48Q5BLP8 95 aa7.74□□□□□ -1.17
HERC3-209ENST00000504994 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
HERC3-209ENST00000504994 CCDC24Q8N4L8 307 aa7.74□□□□□ -1.17
HERC3-209ENST00000504994 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
HERC3-209ENST00000504994 PCDHB11Q9Y5F2 797 aa7.74□□□□□ -1.17
HERC3-209ENST00000504994 SF3B2Q13435 895 aaKnown RBP7.73□□□□□ -1.17
HERC3-209ENST00000504994 TSNAXIP1Q2TAA8 658 aa7.73□□□□□ -1.17
HERC3-209ENST00000504994 RNF20Q5VTR2 975 aa7.73□□□□□ -1.17
HERC3-209ENST00000504994 ZSCAN29Q8IWY8 852 aaPredicted RBP7.73□□□□□ -1.17
HERC3-209ENST00000504994 FAM177A1Q8N128 213 aaPredicted RBP7.73□□□□□ -1.17
HERC3-209ENST00000504994 FOXJ1Q92949 421 aa7.73□□□□□ -1.17
HERC3-209ENST00000504994 PUS7Q96PZ0 661 aaKnown RBP7.73□□□□□ -1.17
HERC3-209ENST00000504994 ESPNB1AK53 854 aa7.72□□□□□ -1.17
HERC3-209ENST00000504994 ZC3H6P61129 1189 aaKnown RBP7.72□□□□□ -1.17
HERC3-209ENST00000504994 COL19A1Q14993 1142 aa7.72□□□□□ -1.17
HERC3-209ENST00000504994 LINC01559Q495D7 138 aa7.72□□□□□ -1.17
HERC3-209ENST00000504994 EAPPQ56P03 285 aaPredicted RBP7.72□□□□□ -1.17
HERC3-209ENST00000504994 BAP1Q92560 729 aa7.72□□□□□ -1.17
HERC3-209ENST00000504994 MARVELD3Q96A59 401 aa7.72□□□□□ -1.17
HERC3-209ENST00000504994 SLC10A4Q96EP9 437 aa7.72□□□□□ -1.17
HERC3-209ENST00000504994 DRC1Q96MC2 740 aa7.72□□□□□ -1.17
HERC3-209ENST00000504994 FAM205CA6NFA0 338 aa7.71□□□□□ -1.18
HERC3-209ENST00000504994 GOLGA8CPA6NN73 597 aa7.71□□□□□ -1.18
HERC3-209ENST00000504994 M0R2N6 131 aa7.71□□□□□ -1.18
HERC3-209ENST00000504994 PTCD1O75127 700 aaKnown RBP7.71□□□□□ -1.18
HERC3-209ENST00000504994 P4HBP07237 508 aaKnown RBP7.71□□□□□ -1.18
HERC3-209ENST00000504994 HSP90B1P14625 803 aaKnown RBP7.71□□□□□ -1.18
HERC3-209ENST00000504994 LSM11P83369 360 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERC3-209ENST00000504994 USP4Q13107 963 aa7.71□□□□□ -1.18
HERC3-209ENST00000504994 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
HERC3-209ENST00000504994 NBPF20Q3BBV1 942 aa7.71□□□□□ -1.18
HERC3-209ENST00000504994 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERC3-209ENST00000504994 HELQQ8TDG4 1101 aa7.71□□□□□ -1.18
HERC3-209ENST00000504994 WBP1LQ9NX94 342 aa7.71□□□□□ -1.18
HERC3-209ENST00000504994 ADH1BP00325 375 aa7.7□□□□□ -1.18
HERC3-209ENST00000504994 AGERQ15109 404 aa7.7□□□□□ -1.18
HERC3-209ENST00000504994 BPHLQ86WA6 291 aaPredicted RBP7.7□□□□□ -1.18
HERC3-209ENST00000504994 WNT2BQ93097 391 aa7.7□□□□□ -1.18
HERC3-209ENST00000504994 C1QTNF2Q9BXJ5 285 aa7.7□□□□□ -1.18
HERC3-209ENST00000504994 ZNF358Q9NW07 568 aa7.7□□□□□ -1.18
HERC3-209ENST00000504994 POTEB3A0JP26 581 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 ST18O60284 1047 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 MRPL58Q14197 206 aaKnown RBP7.69□□□□□ -1.18
HERC3-209ENST00000504994 NAALADL2Q58DX5 795 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 POTEBQ6S5H4 581 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 TMC7Q7Z402 723 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 ZNF511Q8NB15 262 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 COL26A1Q96A83 441 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 PCDH10Q9P2E7 1040 aa7.69□□□□□ -1.18
HERC3-209ENST00000504994 HMGB1P09429 215 aaKnown RBP7.68□□□□□ -1.18
HERC3-209ENST00000504994 NPR3P17342 541 aa7.68□□□□□ -1.18
HERC3-209ENST00000504994 SCTRP47872 440 aa7.68□□□□□ -1.18
HERC3-209ENST00000504994 RBCK1Q9BYM8 510 aa7.68□□□□□ -1.18
HERC3-209ENST00000504994 BACH2Q9BYV9 841 aa7.68□□□□□ -1.18
HERC3-209ENST00000504994 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
HERC3-209ENST00000504994 IGFBP4P22692 258 aa7.67□□□□□ -1.18
HERC3-209ENST00000504994 MPSTP25325 297 aa7.67□□□□□ -1.18
HERC3-209ENST00000504994 RAB15P59190 212 aa7.67□□□□□ -1.18
HERC3-209ENST00000504994 CCDC125Q86Z20 511 aa7.67□□□□□ -1.18
HERC3-209ENST00000504994 FOXO3O43524 673 aa7.66□□□□□ -1.18
HERC3-209ENST00000504994 ZPR1O75312 459 aa7.66□□□□□ -1.18
HERC3-209ENST00000504994 ERCC5P28715 1186 aaPredicted RBP7.66□□□□□ -1.18
HERC3-209ENST00000504994 HDLBPQ00341 1268 aaKnown RBP7.66□□□□□ -1.18
HERC3-209ENST00000504994 FMR1Q06787 632 aaKnown RBP eCLIP7.66□□□□□ -1.18
HERC3-209ENST00000504994 LDLRAD1Q5T700 205 aa7.66□□□□□ -1.18
HERC3-209ENST00000504994 SEPT12Q8IYM1 358 aa7.66□□□□□ -1.18
HERC3-209ENST00000504994 HS3ST6Q96QI5 342 aa7.66□□□□□ -1.18
HERC3-209ENST00000504994 TREHO43280 583 aa7.65□□□□□ -1.18
HERC3-209ENST00000504994 FAM13AO94988 1023 aa7.65□□□□□ -1.18
HERC3-209ENST00000504994 STAU1O95793 577 aaKnown RBP7.65□□□□□ -1.18
HERC3-209ENST00000504994 MYCP01106 439 aaPredicted RBP7.65□□□□□ -1.18
HERC3-209ENST00000504994 TRMT44Q8IYL2 757 aaKnown RBP7.65□□□□□ -1.18
HERC3-209ENST00000504994 SCG3Q8WXD2 468 aaKnown RBP7.65□□□□□ -1.18
HERC3-209ENST00000504994 SCNN1DP51172 638 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 C9orf131Q5VYM1 1079 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 TNS4Q8IZW8 715 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 UBXN4Q92575 508 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 STAC3Q96MF2 364 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 SLC6A16Q9GZN6 736 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 SAP130Q9H0E3 1048 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 BCL11AQ9H165 835 aa7.64□□□□□ -1.19
HERC3-209ENST00000504994 SCAMP3O14828 347 aaKnown RBP7.63□□□□□ -1.19
HERC3-209ENST00000504994 NDUFB5O43674 189 aa7.63□□□□□ -1.19
HERC3-209ENST00000504994 RAD51AP2Q09MP3 1159 aa7.63□□□□□ -1.19
HERC3-209ENST00000504994 FAM161BQ96MY7 647 aa7.63□□□□□ -1.19
HERC3-209ENST00000504994 KCTD15Q96SI1 283 aaPredicted RBP7.63□□□□□ -1.19
HERC3-209ENST00000504994 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
HERC3-209ENST00000504994 EPHA4P54764 986 aa7.62□□□□□ -1.19
HERC3-209ENST00000504994 SH3BP2P78314 561 aa7.62□□□□□ -1.19
HERC3-209ENST00000504994 SF3A1Q15459 793 aaKnown RBP7.62□□□□□ -1.19
HERC3-209ENST00000504994 MTRQ99707 1265 aa7.62□□□□□ -1.19
HERC3-209ENST00000504994 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
HERC3-209ENST00000504994 RNF19AQ9NV58 838 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms