RNA–Protein interactions for RNA: ENST00000504880.5

SLC38A9-208, Transcript of solute carrier family 38 member 9, humanhuman

TSL 5

Gene SLC38A9, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-208ENST00000504880 PLEKHG5O94827 1062 aa29.08■■■□□ 2.25
SLC38A9-208ENST00000504880 TWISTNBQ3B726 338 aaPredicted RBP29.08■■■□□ 2.25
SLC38A9-208ENST00000504880 SLIT3O75094 1523 aa29.07■■■□□ 2.24
SLC38A9-208ENST00000504880 STRCQ7RTU9 1775 aa29.06■■■□□ 2.24
SLC38A9-208ENST00000504880 USHBP1Q8N6Y0 703 aa29.05■■■□□ 2.24
SLC38A9-208ENST00000504880 PHRF1Q9P1Y6 1649 aaKnown RBP29.05■■■□□ 2.24
SLC38A9-208ENST00000504880 CRB1P82279 1406 aa29.05■■■□□ 2.24
SLC38A9-208ENST00000504880 PDZRN3Q9UPQ7 1066 aa29.04■■■□□ 2.24
SLC38A9-208ENST00000504880 ZBTB40Q9NUA8 1239 aa29.04■■■□□ 2.24
SLC38A9-208ENST00000504880 ZBTB47Q9UFB7 747 aaPredicted RBP29.04■■■□□ 2.24
SLC38A9-208ENST00000504880 XIRP1Q702N8 1843 aaKnown RBP29.04■■■□□ 2.24
SLC38A9-208ENST00000504880 ZBTB7CA1YPR0 619 aa29.03■■■□□ 2.24
SLC38A9-208ENST00000504880 DDX17Q92841 729 aaKnown RBP29.03■■■□□ 2.24
SLC38A9-208ENST00000504880 RGPD2P0DJD1 1756 aa29.03■■■□□ 2.24
SLC38A9-208ENST00000504880 KRT28Q7Z3Y7 464 aa29.03■■■□□ 2.24
SLC38A9-208ENST00000504880 IP6K1Q92551 441 aa29.03■■■□□ 2.24
SLC38A9-208ENST00000504880 KRT24Q2M2I5 525 aa29.02■■■□□ 2.24
SLC38A9-208ENST00000504880 ALS2Q96Q42 1657 aa29.02■■■□□ 2.24
SLC38A9-208ENST00000504880 LMOD2Q6P5Q4 547 aa29.01■■■□□ 2.24
SLC38A9-208ENST00000504880 ARHGAP45Q92619 1136 aa29.01■■■□□ 2.24
SLC38A9-208ENST00000504880 DCCP43146 1447 aa29■■■□□ 2.23
SLC38A9-208ENST00000504880 CHL1O00533 1208 aa29■■■□□ 2.23
SLC38A9-208ENST00000504880 HDAC1Q13547 482 aaPredicted RBP29■■■□□ 2.23
SLC38A9-208ENST00000504880 USP19O94966 1318 aa28.99■■■□□ 2.23
SLC38A9-208ENST00000504880 LRRC37A3O60309 1634 aa28.99■■■□□ 2.23
SLC38A9-208ENST00000504880 GCP02774 474 aa28.99■■■□□ 2.23
SLC38A9-208ENST00000504880 ATF3P18847 181 aa28.99■■■□□ 2.23
SLC38A9-208ENST00000504880 KCNH5Q8NCM2 988 aa28.98■■■□□ 2.23
SLC38A9-208ENST00000504880 MSH6P52701 1360 aa28.97■■■□□ 2.23
SLC38A9-208ENST00000504880 MED1Q15648 1581 aaPredicted RBP28.97■■■□□ 2.23
SLC38A9-208ENST00000504880 NBPF6Q5VWK0 638 aa28.96■■■□□ 2.23
SLC38A9-208ENST00000504880 NBPF4Q96M43 638 aa28.96■■■□□ 2.23
SLC38A9-208ENST00000504880 NCOA3Q9Y6Q9 1424 aa28.96■■■□□ 2.23
SLC38A9-208ENST00000504880 MYT1Q01538 1121 aa28.95■■■□□ 2.23
SLC38A9-208ENST00000504880 MIS18AQ9NYP9 233 aa28.95■■■□□ 2.23
SLC38A9-208ENST00000504880 ARHGEF25Q86VW2 580 aa28.94■■■□□ 2.22
SLC38A9-208ENST00000504880 GAS2L2Q8NHY3 880 aa28.94■■■□□ 2.22
SLC38A9-208ENST00000504880 VIRMAQ69YN4 1812 aaKnown RBP28.94■■■□□ 2.22
SLC38A9-208ENST00000504880 LRRC59Q96AG4 307 aaKnown RBP28.94■■■□□ 2.22
SLC38A9-208ENST00000504880 ABCC4O15439 1325 aa28.94■■■□□ 2.22
SLC38A9-208ENST00000504880 ZBTB7BO15156 539 aaPredicted RBP28.92■■■□□ 2.22
SLC38A9-208ENST00000504880 KIAA0232Q92628 1395 aa28.91■■■□□ 2.22
SLC38A9-208ENST00000504880 RTF1Q92541 710 aaKnown RBP28.91■■■□□ 2.22
SLC38A9-208ENST00000504880 SMC5Q8IY18 1101 aa28.9■■■□□ 2.22
SLC38A9-208ENST00000504880 RGPD5Q99666 1765 aa28.9■■■□□ 2.22
SLC38A9-208ENST00000504880 AXIN2Q9Y2T1 843 aa28.89■■■□□ 2.21
SLC38A9-208ENST00000504880 API5Q9BZZ5 524 aaKnown RBP28.88■■■□□ 2.21
SLC38A9-208ENST00000504880 MAP3K5Q99683 1374 aa28.88■■■□□ 2.21
SLC38A9-208ENST00000504880 ZNF335Q9H4Z2 1342 aaPredicted RBP28.88■■■□□ 2.21
SLC38A9-208ENST00000504880 CADPS2Q86UW7 1296 aa28.87■■■□□ 2.21
SLC38A9-208ENST00000504880 DDRGK1Q96HY6 314 aa28.87■■■□□ 2.21
SLC38A9-208ENST00000504880 GNAT3A8MTJ3 354 aa28.86■■■□□ 2.21
SLC38A9-208ENST00000504880 PXDNQ92626 1479 aa28.86■■■□□ 2.21
SLC38A9-208ENST00000504880 HAP1P54257 671 aaPredicted RBP28.85■■■□□ 2.21
SLC38A9-208ENST00000504880 IL17REQ8NFR9 667 aa28.85■■■□□ 2.21
SLC38A9-208ENST00000504880 TSPYL4Q9UJ04 414 aa28.85■■■□□ 2.21
SLC38A9-208ENST00000504880 CAMTA1Q9Y6Y1 1673 aa28.85■■■□□ 2.21
SLC38A9-208ENST00000504880 NCAPD2Q15021 1401 aa28.84■■■□□ 2.21
SLC38A9-208ENST00000504880 SEC24BO95487 1268 aa28.84■■■□□ 2.21
SLC38A9-208ENST00000504880 C1orf115Q9H7X2 142 aa28.84■■■□□ 2.21
SLC38A9-208ENST00000504880 CHMP4BQ9H444 224 aaKnown RBP28.84■■■□□ 2.21
SLC38A9-208ENST00000504880 ANKRD24Q8TF21 1146 aa28.83■■■□□ 2.21
SLC38A9-208ENST00000504880 ZC3H6P61129 1189 aaKnown RBP28.82■■■□□ 2.2
SLC38A9-208ENST00000504880 HTATSF1O43719 755 aaKnown RBP28.82■■■□□ 2.2
SLC38A9-208ENST00000504880 CRYBG1Q9Y4K1 1723 aa28.82■■■□□ 2.2
SLC38A9-208ENST00000504880 RGS12O14924 1447 aa28.81■■■□□ 2.2
SLC38A9-208ENST00000504880 TNS3Q68CZ2 1445 aa28.8■■■□□ 2.2
SLC38A9-208ENST00000504880 NPHP3Q7Z494 1330 aa28.8■■■□□ 2.2
SLC38A9-208ENST00000504880 CABLES1Q8TDN4 633 aa28.8■■■□□ 2.2
SLC38A9-208ENST00000504880 NUCB1Q02818 461 aa28.77■■■□□ 2.2
SLC38A9-208ENST00000504880 BRINP3Q76B58 766 aa28.77■■■□□ 2.2
SLC38A9-208ENST00000504880 LMO7Q8WWI1 1683 aa28.77■■■□□ 2.2
SLC38A9-208ENST00000504880 COL18A1P39060 1754 aa28.76■■■□□ 2.2
SLC38A9-208ENST00000504880 INTS3Q68E01 1043 aaKnown RBP28.76■■■□□ 2.19
SLC38A9-208ENST00000504880 SIRT2Q8IXJ6 389 aa28.76■■■□□ 2.19
SLC38A9-208ENST00000504880 ERBB3P21860 1342 aa28.75■■■□□ 2.19
SLC38A9-208ENST00000504880 CEMIPQ8WUJ3 1361 aa28.75■■■□□ 2.19
SLC38A9-208ENST00000504880 SLC4A2P04920 1241 aa28.74■■■□□ 2.19
SLC38A9-208ENST00000504880 FAM208AQ9UK61 1670 aaKnown RBP28.74■■■□□ 2.19
SLC38A9-208ENST00000504880 PTPRCP08575 1304 aa28.74■■■□□ 2.19
SLC38A9-208ENST00000504880 SPATA31A3Q5VYP0 1347 aa28.74■■■□□ 2.19
SLC38A9-208ENST00000504880 LGR6Q9HBX8 967 aa28.73■■■□□ 2.19
SLC38A9-208ENST00000504880 LNPKQ9C0E8 428 aa28.72■■■□□ 2.19
SLC38A9-208ENST00000504880 SLC4A3P48751 1232 aa28.72■■■□□ 2.19
SLC38A9-208ENST00000504880 CHD1LQ86WJ1 897 aa28.72■■■□□ 2.19
SLC38A9-208ENST00000504880 NBR1Q14596 966 aa28.7■■■□□ 2.19
SLC38A9-208ENST00000504880 GCC1Q96CN9 775 aa28.7■■■□□ 2.19
SLC38A9-208ENST00000504880 ZNF530Q6P9A1 599 aaPredicted RBP28.7■■■□□ 2.18
SLC38A9-208ENST00000504880 G2E3Q7L622 706 aa28.69■■■□□ 2.18
SLC38A9-208ENST00000504880 TAF7Q15545 349 aaPredicted RBP28.69■■■□□ 2.18
SLC38A9-208ENST00000504880 CHRNA2Q15822 529 aa28.68■■■□□ 2.18
SLC38A9-208ENST00000504880 KDM3BQ7LBC6 1761 aa28.68■■■□□ 2.18
SLC38A9-208ENST00000504880 ANKRD45Q5TZF3 282 aa28.67■■■□□ 2.18
SLC38A9-208ENST00000504880 PLEKHO1Q53GL0 409 aaPredicted RBP28.65■■■□□ 2.18
SLC38A9-208ENST00000504880 AKAP4Q5JQC9 854 aa28.65■■■□□ 2.18
SLC38A9-208ENST00000504880 MPRIPQ6WCQ1 1025 aa28.65■■■□□ 2.18
SLC38A9-208ENST00000504880 NECTIN2Q92692 538 aa28.65■■■□□ 2.18
SLC38A9-208ENST00000504880 SLAIN2Q9P270 581 aa28.64■■■□□ 2.18
SLC38A9-208ENST00000504880 BABAM1Q9NWV8 329 aa28.64■■■□□ 2.17
SLC38A9-208ENST00000504880 ATP10DQ9P241 1426 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms