RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 ZCRB1Q8TBF4 217 aaKnown RBP34.87■■■■□ 3.17
PVT1-201ENST00000504719 BTAF1O14981 1849 aa34.86■■■■□ 3.17
PVT1-201ENST00000504719 PPM1GO15355 546 aaPredicted RBP34.86■■■■□ 3.17
PVT1-201ENST00000504719 POLKQ9UBT6 870 aa34.86■■■■□ 3.17
PVT1-201ENST00000504719 WASHC2AQ641Q2 1341 aa34.84■■■■□ 3.17
PVT1-201ENST00000504719 RAPGEF4Q8WZA2 1011 aa34.83■■■■□ 3.17
PVT1-201ENST00000504719 KIF7Q2M1P5 1343 aa34.82■■■■□ 3.17
PVT1-201ENST00000504719 TXNRD1Q16881 649 aa34.82■■■■□ 3.16
PVT1-201ENST00000504719 NSD2O96028 1365 aa34.82■■■■□ 3.16
PVT1-201ENST00000504719 TATP17735 454 aaPredicted RBP34.81■■■■□ 3.16
PVT1-201ENST00000504719 TNNT2P45379 298 aaPredicted RBP34.8■■■■□ 3.16
PVT1-201ENST00000504719 ANO8Q9HCE9 1232 aaPredicted RBP34.78■■■■□ 3.16
PVT1-201ENST00000504719 NCAPD2Q15021 1401 aa34.78■■■■□ 3.16
PVT1-201ENST00000504719 DOT1LQ8TEK3 1739 aa34.78■■■■□ 3.16
PVT1-201ENST00000504719 KNSTRNQ9Y448 316 aa34.76■■■■□ 3.16
PVT1-201ENST00000504719 EYA1Q99502 592 aa34.72■■■■□ 3.15
PVT1-201ENST00000504719 PRIM1P49642 420 aaKnown RBP34.71■■■■□ 3.15
PVT1-201ENST00000504719 MORC1Q86VD1 984 aa34.71■■■■□ 3.15
PVT1-201ENST00000504719 PKD1L3Q7Z443 1732 aa34.7■■■■□ 3.15
PVT1-201ENST00000504719 EIF4A2Q14240 407 aaKnown RBP34.69■■■■□ 3.14
PVT1-201ENST00000504719 SYTL4Q96C24 671 aaPredicted RBP34.69■■■■□ 3.14
PVT1-201ENST00000504719 PCDH11XQ9BZA7 1347 aa34.69■■■■□ 3.14
PVT1-201ENST00000504719 PCDH11YQ9BZA8 1340 aa34.69■■■■□ 3.14
PVT1-201ENST00000504719 CASZ1Q86V15 1759 aa34.67■■■■□ 3.14
PVT1-201ENST00000504719 STK32BQ9NY57 414 aa34.67■■■■□ 3.14
PVT1-201ENST00000504719 AMER1Q5JTC6 1135 aaPredicted RBP34.66■■■■□ 3.14
PVT1-201ENST00000504719 PAPPAQ13219 1627 aa34.66■■■■□ 3.14
PVT1-201ENST00000504719 SLC15A2Q16348 729 aa34.65■■■■□ 3.14
PVT1-201ENST00000504719 CYP27B1O15528 508 aa34.64■■■■□ 3.14
PVT1-201ENST00000504719 LY75O60449 1722 aa34.62■■■■□ 3.13
PVT1-201ENST00000504719 LRRC4BQ9NT99 713 aa34.62■■■■□ 3.13
PVT1-201ENST00000504719 PER1O15534 1290 aaPredicted RBP34.61■■■■□ 3.13
PVT1-201ENST00000504719 SLC27A3Q5K4L6 730 aa34.6■■■■□ 3.13
PVT1-201ENST00000504719 SPON1Q9HCB6 807 aa34.6■■■■□ 3.13
PVT1-201ENST00000504719 PDGFDQ9GZP0 370 aaPredicted RBP34.59■■■■□ 3.13
PVT1-201ENST00000504719 SPG7Q9UQ90 795 aa34.59■■■■□ 3.13
PVT1-201ENST00000504719 IGSF1Q8N6C5 1336 aa34.58■■■■□ 3.13
PVT1-201ENST00000504719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.58■■■■□ 3.131e-6■□□□□ 11.1
PVT1-201ENST00000504719 TOGARAM1Q9Y4F4 1720 aa34.57■■■■□ 3.12
PVT1-201ENST00000504719 ITGB4P16144 1822 aa34.57■■■■□ 3.12
PVT1-201ENST00000504719 NKX1-1Q15270 411 aaPredicted RBP34.55■■■■□ 3.12
PVT1-201ENST00000504719 PLEKHG2Q9H7P9 1386 aa34.53■■■■□ 3.12
PVT1-201ENST00000504719 ZNF827Q17R98 1081 aa34.53■■■■□ 3.12
PVT1-201ENST00000504719 AKT1S1Q96B36 256 aa34.5■■■■□ 3.11
PVT1-201ENST00000504719 ZBTB7AO95365 584 aa34.49■■■■□ 3.11
PVT1-201ENST00000504719 KCNQ4P56696 695 aa34.49■■■■□ 3.11
PVT1-201ENST00000504719 QSER1Q2KHR3 1735 aa34.49■■■■□ 3.11
PVT1-201ENST00000504719 MPRIPQ6WCQ1 1025 aa34.48■■■■□ 3.11
PVT1-201ENST00000504719 IFNL2Q8IZJ0 200 aa34.48■■■■□ 3.11
PVT1-201ENST00000504719 PHKG2P15735 406 aa34.47■■■■□ 3.11
PVT1-201ENST00000504719 CC2D1BQ5T0F9 858 aaKnown RBP34.47■■■■□ 3.11
PVT1-201ENST00000504719 CCNL1Q9UK58 526 aaPredicted RBP34.46■■■■□ 3.11
PVT1-201ENST00000504719 NPC1L1Q9UHC9 1359 aa34.46■■■■□ 3.11
PVT1-201ENST00000504719 IL13P35225 146 aa34.45■■■■□ 3.11
PVT1-201ENST00000504719 PPP1R1BQ9UD71 204 aaPredicted RBP34.45■■■■□ 3.11
PVT1-201ENST00000504719 TUBGCP6Q96RT7 1819 aa34.44■■■■□ 3.1
PVT1-201ENST00000504719 MTHFSP49914 203 aa34.44■■■■□ 3.1
PVT1-201ENST00000504719 ATF5Q9Y2D1 282 aaPredicted RBP34.43■■■■□ 3.1
PVT1-201ENST00000504719 ZEB1P37275 1124 aaPredicted RBP34.42■■■■□ 3.1
PVT1-201ENST00000504719 AEBP1Q8IUX7 1158 aa34.42■■■■□ 3.1
PVT1-201ENST00000504719 PIGBQ92521 554 aa34.42■■■■□ 3.1
PVT1-201ENST00000504719 MTFR1LQ9H019 292 aa34.42■■■■□ 3.1
PVT1-201ENST00000504719 PALLDQ8WX93 1383 aa34.41■■■■□ 3.1
PVT1-201ENST00000504719 PTGER2P43116 358 aa34.41■■■■□ 3.1
PVT1-201ENST00000504719 PLEKHO1Q53GL0 409 aaPredicted RBP34.41■■■■□ 3.1
PVT1-201ENST00000504719 TAF1LQ8IZX4 1826 aa34.39■■■■□ 3.1
PVT1-201ENST00000504719 SULT6B1Q6IMI4 303 aa34.39■■■■□ 3.1
PVT1-201ENST00000504719 SMARCC1Q92922 1105 aaPredicted RBP34.39■■■■□ 3.1
PVT1-201ENST00000504719 C5P01031 1676 aa34.38■■■■□ 3.09
PVT1-201ENST00000504719 AMOTQ4VCS5 1084 aa34.38■■■■□ 3.09
PVT1-201ENST00000504719 KDRP35968 1356 aa34.37■■■■□ 3.09
PVT1-201ENST00000504719 TFCP2L1Q9NZI6 479 aa34.37■■■■□ 3.09
PVT1-201ENST00000504719 PNPLA7Q6ZV29 1317 aa34.36■■■■□ 3.09
PVT1-201ENST00000504719 TMOD3Q9NYL9 352 aa34.36■■■■□ 3.09
PVT1-201ENST00000504719 SGIP1Q9BQI5 828 aa34.35■■■■□ 3.09
PVT1-201ENST00000504719 HSP90AB1P08238 724 aaKnown RBP34.33■■■■□ 3.09
PVT1-201ENST00000504719 CNGB1Q14028 1251 aaPredicted RBP34.33■■■■□ 3.09
PVT1-201ENST00000504719 ZNF530Q6P9A1 599 aaPredicted RBP34.33■■■■□ 3.09
PVT1-201ENST00000504719 HMGB2P26583 209 aaKnown RBP34.32■■■■□ 3.08
PVT1-201ENST00000504719 SLC16A10Q8TF71 515 aa34.32■■■■□ 3.08
PVT1-201ENST00000504719 DCAF5Q96JK2 942 aa34.31■■■■□ 3.08
PVT1-201ENST00000504719 ERVV-2B6SEH9 535 aa34.29■■■■□ 3.08
PVT1-201ENST00000504719 ASAP1Q9ULH1 1129 aa34.29■■■■□ 3.08
PVT1-201ENST00000504719 COL24A1Q17RW2 1714 aa34.29■■■■□ 3.08
PVT1-201ENST00000504719 DIAPH1O60610 1272 aaKnown RBP34.28■■■■□ 3.08
PVT1-201ENST00000504719 KDM6AO15550 1401 aaPredicted RBP34.27■■■■□ 3.08
PVT1-201ENST00000504719 C4BP0C0L5 1744 aa34.26■■■■□ 3.07
PVT1-201ENST00000504719 LOC102724428A0A0B4J2F2 783 aa34.25■■■■□ 3.07
PVT1-201ENST00000504719 SIK1P57059 783 aa34.25■■■■□ 3.07
PVT1-201ENST00000504719 C1orf141Q5JVX7 400 aa34.25■■■■□ 3.07
PVT1-201ENST00000504719 ATG3Q9NT62 314 aa34.25■■■■□ 3.07
PVT1-201ENST00000504719 COL3A1P02461 1466 aaPredicted RBP34.25■■■■□ 3.07
PVT1-201ENST00000504719 HMOX1P09601 288 aa34.24■■■■□ 3.07
PVT1-201ENST00000504719 COL23A1Q86Y22 540 aaPredicted RBP34.23■■■■□ 3.07
PVT1-201ENST00000504719 ARXQ96QS3 562 aa34.21■■■■□ 3.07
PVT1-201ENST00000504719 SCN11AQ9UI33 1791 aa34.21■■■■□ 3.07
PVT1-201ENST00000504719 UBR3Q6ZT12 1888 aa34.19■■■■□ 3.06
PVT1-201ENST00000504719 CABP4P57796 275 aa34.19■■■■□ 3.06
PVT1-201ENST00000504719 FHDC1Q9C0D6 1143 aaPredicted RBP34.19■■■■□ 3.06
PVT1-201ENST00000504719 MSH5O43196 834 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms