RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
PDGFRA-204ENST00000504461 RAPGEF4Q8WZA2 1011 aa17.13■□□□□ 0.33
PDGFRA-204ENST00000504461 INSRP06213 1382 aa17.13■□□□□ 0.33
PDGFRA-204ENST00000504461 FLT4P35916 1363 aa17.13■□□□□ 0.33
PDGFRA-204ENST00000504461 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
PDGFRA-204ENST00000504461 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
PDGFRA-204ENST00000504461 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
PDGFRA-204ENST00000504461 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
PDGFRA-204ENST00000504461 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
PDGFRA-204ENST00000504461 CGNL1Q0VF96 1302 aa17.12■□□□□ 0.33
PDGFRA-204ENST00000504461 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
PDGFRA-204ENST00000504461 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
PDGFRA-204ENST00000504461 MEGF6O75095 1541 aa17.11■□□□□ 0.33
PDGFRA-204ENST00000504461 PRIM1P49642 420 aaKnown RBP17.09■□□□□ 0.33
PDGFRA-204ENST00000504461 EMILIN1Q9Y6C2 1016 aa17.09■□□□□ 0.33
PDGFRA-204ENST00000504461 LY75O60449 1722 aa17.08■□□□□ 0.32
PDGFRA-204ENST00000504461 ZBTB7AO95365 584 aa17.08■□□□□ 0.32
PDGFRA-204ENST00000504461 PDGFDQ9GZP0 370 aaPredicted RBP17.08■□□□□ 0.32
PDGFRA-204ENST00000504461 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
PDGFRA-204ENST00000504461 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
PDGFRA-204ENST00000504461 ITGB4P16144 1822 aa17.05■□□□□ 0.32
PDGFRA-204ENST00000504461 QSER1Q2KHR3 1735 aa17.05■□□□□ 0.32
PDGFRA-204ENST00000504461 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
PDGFRA-204ENST00000504461 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
PDGFRA-204ENST00000504461 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
PDGFRA-204ENST00000504461 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
PDGFRA-204ENST00000504461 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
PDGFRA-204ENST00000504461 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
PDGFRA-204ENST00000504461 PANK3Q9H999 370 aa17.04■□□□□ 0.32
PDGFRA-204ENST00000504461 LRRC4BQ9NT99 713 aa17.04■□□□□ 0.32
PDGFRA-204ENST00000504461 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
PDGFRA-204ENST00000504461 MTFR1LQ9H019 292 aa17.03■□□□□ 0.32
PDGFRA-204ENST00000504461 POLKQ9UBT6 870 aa17.03■□□□□ 0.32
PDGFRA-204ENST00000504461 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
PDGFRA-204ENST00000504461 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
PDGFRA-204ENST00000504461 NSD2O96028 1365 aa17.01■□□□□ 0.31
PDGFRA-204ENST00000504461 PTGER2P43116 358 aa17■□□□□ 0.31
PDGFRA-204ENST00000504461 KCNQ4P56696 695 aa17■□□□□ 0.31
PDGFRA-204ENST00000504461 SPG7Q9UQ90 795 aa17■□□□□ 0.31
PDGFRA-204ENST00000504461 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
PDGFRA-204ENST00000504461 AKT1S1Q96B36 256 aa16.99■□□□□ 0.31
PDGFRA-204ENST00000504461 EYA1Q99502 592 aa16.99■□□□□ 0.31
PDGFRA-204ENST00000504461 TFCP2L1Q9NZI6 479 aa16.99■□□□□ 0.31
PDGFRA-204ENST00000504461 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
PDGFRA-204ENST00000504461 C5P01031 1676 aa16.98■□□□□ 0.31
PDGFRA-204ENST00000504461 CYP27B1O15528 508 aa16.98■□□□□ 0.31
PDGFRA-204ENST00000504461 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
PDGFRA-204ENST00000504461 TOGARAM1Q9Y4F4 1720 aa16.98■□□□□ 0.31
PDGFRA-204ENST00000504461 HMGB2P26583 209 aaKnown RBP16.97■□□□□ 0.31
PDGFRA-204ENST00000504461 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
PDGFRA-204ENST00000504461 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
PDGFRA-204ENST00000504461 NCAPD2Q15021 1401 aa16.96■□□□□ 0.31
PDGFRA-204ENST00000504461 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
PDGFRA-204ENST00000504461 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
PDGFRA-204ENST00000504461 ARXQ96QS3 562 aa16.95■□□□□ 0.3
PDGFRA-204ENST00000504461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDGFRA-204ENST00000504461 MSH5O43196 834 aa16.94■□□□□ 0.3
PDGFRA-204ENST00000504461 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
PDGFRA-204ENST00000504461 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
PDGFRA-204ENST00000504461 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
PDGFRA-204ENST00000504461 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
PDGFRA-204ENST00000504461 POLD1P28340 1107 aa16.93■□□□□ 0.3
PDGFRA-204ENST00000504461 NKX1-1Q15270 411 aaPredicted RBP16.93■□□□□ 0.3
PDGFRA-204ENST00000504461 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
PDGFRA-204ENST00000504461 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
PDGFRA-204ENST00000504461 PALLDQ8WX93 1383 aa16.92■□□□□ 0.3
PDGFRA-204ENST00000504461 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
PDGFRA-204ENST00000504461 PIGBQ92521 554 aa16.91■□□□□ 0.3
PDGFRA-204ENST00000504461 KIF7Q2M1P5 1343 aa16.91■□□□□ 0.3
PDGFRA-204ENST00000504461 PHKG2P15735 406 aa16.9■□□□□ 0.3
PDGFRA-204ENST00000504461 YY1P25490 414 aa16.9■□□□□ 0.3
PDGFRA-204ENST00000504461 TMOD3Q9NYL9 352 aa16.9■□□□□ 0.3
PDGFRA-204ENST00000504461 IGSF1Q8N6C5 1336 aa16.9■□□□□ 0.3
PDGFRA-204ENST00000504461 CHD4Q14839 1912 aa16.9■□□□□ 0.3
PDGFRA-204ENST00000504461 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
PDGFRA-204ENST00000504461 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
PDGFRA-204ENST00000504461 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
PDGFRA-204ENST00000504461 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
PDGFRA-204ENST00000504461 FLAD1Q8NFF5 587 aa16.87■□□□□ 0.29
PDGFRA-204ENST00000504461 PLEKHG2Q9H7P9 1386 aa16.87■□□□□ 0.29
PDGFRA-204ENST00000504461 UBR3Q6ZT12 1888 aa16.86■□□□□ 0.29
PDGFRA-204ENST00000504461 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
PDGFRA-204ENST00000504461 AK7Q96M32 723 aa16.86■□□□□ 0.29
PDGFRA-204ENST00000504461 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
PDGFRA-204ENST00000504461 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
PDGFRA-204ENST00000504461 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
PDGFRA-204ENST00000504461 LOC102724428A0A0B4J2F2 783 aa16.84■□□□□ 0.29
PDGFRA-204ENST00000504461 SIK1P57059 783 aa16.84■□□□□ 0.29
PDGFRA-204ENST00000504461 SULT6B1Q6IMI4 303 aa16.84■□□□□ 0.29
PDGFRA-204ENST00000504461 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
PDGFRA-204ENST00000504461 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
PDGFRA-204ENST00000504461 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
PDGFRA-204ENST00000504461 ERVV-2B6SEH9 535 aa16.83■□□□□ 0.28
PDGFRA-204ENST00000504461 C1orf141Q5JVX7 400 aa16.83■□□□□ 0.28
PDGFRA-204ENST00000504461 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
PDGFRA-204ENST00000504461 ATP6V1AP38606 617 aa16.82■□□□□ 0.28
PDGFRA-204ENST00000504461 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
PDGFRA-204ENST00000504461 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
PDGFRA-204ENST00000504461 AEBP1Q8IUX7 1158 aa16.82■□□□□ 0.28
PDGFRA-204ENST00000504461 ATG3Q9NT62 314 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms