RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 SMC5Q8IY18 1101 aa11.51□□□□□ -0.57
LINC02239-201ENST00000504339 RGS12O14924 1447 aa11.5□□□□□ -0.57
LINC02239-201ENST00000504339 KIAA0232Q92628 1395 aa11.5□□□□□ -0.57
LINC02239-201ENST00000504339 DEKP35659 375 aaKnown RBP11.49□□□□□ -0.57
LINC02239-201ENST00000504339 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
LINC02239-201ENST00000504339 SIRT2Q8IXJ6 389 aa11.49□□□□□ -0.57
LINC02239-201ENST00000504339 PSME1Q06323 249 aa11.49□□□□□ -0.57
LINC02239-201ENST00000504339 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
LINC02239-201ENST00000504339 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
LINC02239-201ENST00000504339 LTV1Q96GA3 475 aaPredicted RBP11.49□□□□□ -0.57
LINC02239-201ENST00000504339 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
LINC02239-201ENST00000504339 NBR1Q14596 966 aa11.48□□□□□ -0.57
LINC02239-201ENST00000504339 IP6K1Q92551 441 aa11.48□□□□□ -0.57
LINC02239-201ENST00000504339 MSH6P52701 1360 aa11.48□□□□□ -0.57
LINC02239-201ENST00000504339 IL17REQ8NFR9 667 aa11.48□□□□□ -0.57
LINC02239-201ENST00000504339 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
LINC02239-201ENST00000504339 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
LINC02239-201ENST00000504339 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
LINC02239-201ENST00000504339 RTL1A6NKG5 1358 aa11.47□□□□□ -0.57
LINC02239-201ENST00000504339 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
LINC02239-201ENST00000504339 PROSER2Q86WR7 435 aaPredicted RBP11.46□□□□□ -0.57
LINC02239-201ENST00000504339 LRRC37A3O60309 1634 aa11.45□□□□□ -0.58
LINC02239-201ENST00000504339 HTATSF1O43719 755 aaKnown RBP11.45□□□□□ -0.58
LINC02239-201ENST00000504339 GCP02774 474 aa11.45□□□□□ -0.58
LINC02239-201ENST00000504339 NUCB1Q02818 461 aa11.45□□□□□ -0.58
LINC02239-201ENST00000504339 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
LINC02239-201ENST00000504339 RTF1Q92541 710 aaKnown RBP11.45□□□□□ -0.58
LINC02239-201ENST00000504339 API5Q9BZZ5 524 aaKnown RBP11.45□□□□□ -0.58
LINC02239-201ENST00000504339 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
LINC02239-201ENST00000504339 C1orf167Q5SNV9 1468 aa11.45□□□□□ -0.58
LINC02239-201ENST00000504339 GNAT3A8MTJ3 354 aa11.44□□□□□ -0.58
LINC02239-201ENST00000504339 G2E3Q7L622 706 aa11.44□□□□□ -0.58
LINC02239-201ENST00000504339 ARHGEF25Q86VW2 580 aa11.44□□□□□ -0.58
LINC02239-201ENST00000504339 LTN1O94822 1766 aa11.44□□□□□ -0.58
LINC02239-201ENST00000504339 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
LINC02239-201ENST00000504339 LRRC59Q96AG4 307 aaKnown RBP11.44□□□□□ -0.58
LINC02239-201ENST00000504339 C19orf44Q9H6X5 657 aa11.44□□□□□ -0.58
LINC02239-201ENST00000504339 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
LINC02239-201ENST00000504339 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
LINC02239-201ENST00000504339 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
LINC02239-201ENST00000504339 SLIT3O75094 1523 aa11.43□□□□□ -0.58
LINC02239-201ENST00000504339 KCNH5Q8NCM2 988 aa11.43□□□□□ -0.58
LINC02239-201ENST00000504339 PHRF1Q9P1Y6 1649 aaKnown RBP11.42□□□□□ -0.58
LINC02239-201ENST00000504339 KRT28Q7Z3Y7 464 aa11.42□□□□□ -0.58
LINC02239-201ENST00000504339 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
LINC02239-201ENST00000504339 LNPKQ9C0E8 428 aa11.42□□□□□ -0.58
LINC02239-201ENST00000504339 VIRMAQ69YN4 1812 aaKnown RBP11.42□□□□□ -0.58
LINC02239-201ENST00000504339 TRPM3Q9HCF6 1732 aaPredicted RBP11.42□□□□□ -0.58
LINC02239-201ENST00000504339 CEMIPQ8WUJ3 1361 aa11.42□□□□□ -0.58
LINC02239-201ENST00000504339 STRCP1A6NGW2 1772 aa11.42□□□□□ -0.58
LINC02239-201ENST00000504339 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
LINC02239-201ENST00000504339 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
LINC02239-201ENST00000504339 CHD1LQ86WJ1 897 aa11.41□□□□□ -0.58
LINC02239-201ENST00000504339 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
LINC02239-201ENST00000504339 MST1RQ04912 1400 aa11.41□□□□□ -0.58
LINC02239-201ENST00000504339 NCAPD2Q15021 1401 aa11.41□□□□□ -0.58
LINC02239-201ENST00000504339 ATP10DQ9P241 1426 aa11.41□□□□□ -0.58
LINC02239-201ENST00000504339 PTPRCP08575 1304 aa11.41□□□□□ -0.58
LINC02239-201ENST00000504339 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
LINC02239-201ENST00000504339 HSPA2P54652 639 aa11.4□□□□□ -0.58
LINC02239-201ENST00000504339 F6X3S4 739 aa11.4□□□□□ -0.58
LINC02239-201ENST00000504339 TAF7Q15545 349 aaPredicted RBP11.4□□□□□ -0.58
LINC02239-201ENST00000504339 DDRGK1Q96HY6 314 aa11.4□□□□□ -0.58
LINC02239-201ENST00000504339 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
LINC02239-201ENST00000504339 MEIS3Q99687 375 aa11.39□□□□□ -0.59
LINC02239-201ENST00000504339 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
LINC02239-201ENST00000504339 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
LINC02239-201ENST00000504339 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
LINC02239-201ENST00000504339 MED1Q15648 1581 aaPredicted RBP11.38□□□□□ -0.59
LINC02239-201ENST00000504339 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
LINC02239-201ENST00000504339 ANKRD45Q5TZF3 282 aa11.38□□□□□ -0.59
LINC02239-201ENST00000504339 TBC1D32Q96NH3 1257 aa11.38□□□□□ -0.59
LINC02239-201ENST00000504339 CHMP4BQ9H444 224 aaKnown RBP11.38□□□□□ -0.59
LINC02239-201ENST00000504339 KCNQ3O43525 872 aa11.38□□□□□ -0.59
LINC02239-201ENST00000504339 PIAS4Q8N2W9 510 aaPredicted RBP11.38□□□□□ -0.59
LINC02239-201ENST00000504339 ANKRD24Q8TF21 1146 aa11.38□□□□□ -0.59
LINC02239-201ENST00000504339 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
LINC02239-201ENST00000504339 PXDNQ92626 1479 aa11.37□□□□□ -0.59
LINC02239-201ENST00000504339 CEP85Q6P2H3 762 aa11.37□□□□□ -0.59
LINC02239-201ENST00000504339 ANKRD44Q8N8A2 993 aa11.37□□□□□ -0.59
LINC02239-201ENST00000504339 DCTPP1Q9H773 170 aa11.37□□□□□ -0.59
LINC02239-201ENST00000504339 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
LINC02239-201ENST00000504339 ALS2Q96Q42 1657 aa11.36□□□□□ -0.59
LINC02239-201ENST00000504339 ZC3H6P61129 1189 aaKnown RBP11.36□□□□□ -0.59
LINC02239-201ENST00000504339 FLIIQ13045 1269 aa11.36□□□□□ -0.59
LINC02239-201ENST00000504339 EIF4A1P60842 406 aaKnown RBP11.35□□□□□ -0.59
LINC02239-201ENST00000504339 KIF1AQ12756 1690 aa11.35□□□□□ -0.59
LINC02239-201ENST00000504339 ATF3P18847 181 aa11.35□□□□□ -0.59
LINC02239-201ENST00000504339 AKAP4Q5JQC9 854 aa11.35□□□□□ -0.59
LINC02239-201ENST00000504339 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
LINC02239-201ENST00000504339 MPRIPQ6WCQ1 1025 aa11.35□□□□□ -0.59
LINC02239-201ENST00000504339 DCCP43146 1447 aa11.35□□□□□ -0.59
LINC02239-201ENST00000504339 ZNF530Q6P9A1 599 aaPredicted RBP11.34□□□□□ -0.59
LINC02239-201ENST00000504339 SLC4A10Q6U841 1118 aa11.34□□□□□ -0.59
LINC02239-201ENST00000504339 C16orf71Q8IYS4 520 aaPredicted RBP11.34□□□□□ -0.59
LINC02239-201ENST00000504339 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
LINC02239-201ENST00000504339 ERBB3P21860 1342 aa11.34□□□□□ -0.59
LINC02239-201ENST00000504339 FAM208AQ9UK61 1670 aaKnown RBP11.34□□□□□ -0.59
LINC02239-201ENST00000504339 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
LINC02239-201ENST00000504339 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms