RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 BARGINQ6ZT62 677 aa18.25■□□□□ 0.51
CYSTM1-202ENST00000504227 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
CYSTM1-202ENST00000504227 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
CYSTM1-202ENST00000504227 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
CYSTM1-202ENST00000504227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.25■□□□□ 0.51
CYSTM1-202ENST00000504227 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.24■□□□□ 0.51
CYSTM1-202ENST00000504227 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
CYSTM1-202ENST00000504227 ATRNO75882 1429 aa18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 RIPK4P57078 832 aa18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 NEUROD2Q15784 382 aa18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 ZCRB1Q8TBF4 217 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-202ENST00000504227 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
CYSTM1-202ENST00000504227 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
CYSTM1-202ENST00000504227 MEGF6O75095 1541 aa18.22■□□□□ 0.51
CYSTM1-202ENST00000504227 EXOC5O00471 708 aa18.21■□□□□ 0.51
CYSTM1-202ENST00000504227 FAM98CQ17RN3 349 aaKnown RBP18.21■□□□□ 0.51
CYSTM1-202ENST00000504227 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
CYSTM1-202ENST00000504227 OVOS2A0A0G2JMS6 1433 aa18.21■□□□□ 0.51
CYSTM1-202ENST00000504227 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
CYSTM1-202ENST00000504227 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
CYSTM1-202ENST00000504227 DISP2A7MBM2 1401 aa18.2■□□□□ 0.5
CYSTM1-202ENST00000504227 A0A0G2JS52 829 aa18.19■□□□□ 0.5
CYSTM1-202ENST00000504227 MYT1Q01538 1121 aa18.19■□□□□ 0.5
CYSTM1-202ENST00000504227 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
CYSTM1-202ENST00000504227 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
CYSTM1-202ENST00000504227 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
CYSTM1-202ENST00000504227 AKAP4Q5JQC9 854 aa18.18■□□□□ 0.5
CYSTM1-202ENST00000504227 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
CYSTM1-202ENST00000504227 DDB1Q16531 1140 aa18.17■□□□□ 0.5
CYSTM1-202ENST00000504227 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
CYSTM1-202ENST00000504227 IFNL2Q8IZJ0 200 aa18.17■□□□□ 0.5
CYSTM1-202ENST00000504227 DDX54Q8TDD1 881 aaKnown RBP18.17■□□□□ 0.5
CYSTM1-202ENST00000504227 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
CYSTM1-202ENST00000504227 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
CYSTM1-202ENST00000504227 PARP4Q9UKK3 1724 aaKnown RBP18.16■□□□□ 0.5
CYSTM1-202ENST00000504227 ONECUT3O60422 494 aaPredicted RBP18.16■□□□□ 0.5
CYSTM1-202ENST00000504227 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
CYSTM1-202ENST00000504227 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
CYSTM1-202ENST00000504227 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
CYSTM1-202ENST00000504227 CYP27B1O15528 508 aa18.15■□□□□ 0.5
CYSTM1-202ENST00000504227 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
CYSTM1-202ENST00000504227 PHKG2P15735 406 aa18.15■□□□□ 0.5
CYSTM1-202ENST00000504227 RXRBP28702 533 aa18.15■□□□□ 0.5
CYSTM1-202ENST00000504227 WWC1Q8IX03 1113 aa18.15■□□□□ 0.5
CYSTM1-202ENST00000504227 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
CYSTM1-202ENST00000504227 GLI3P10071 1580 aa18.13■□□□□ 0.49
CYSTM1-202ENST00000504227 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
CYSTM1-202ENST00000504227 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
CYSTM1-202ENST00000504227 SEPT12Q8IYM1 358 aa18.13■□□□□ 0.49
CYSTM1-202ENST00000504227 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
CYSTM1-202ENST00000504227 MCM10Q7L590 875 aa18.12■□□□□ 0.49
CYSTM1-202ENST00000504227 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
CYSTM1-202ENST00000504227 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
CYSTM1-202ENST00000504227 RNMTO43148 476 aaKnown RBP18.11■□□□□ 0.49
CYSTM1-202ENST00000504227 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
CYSTM1-202ENST00000504227 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
CYSTM1-202ENST00000504227 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
CYSTM1-202ENST00000504227 TNS2Q63HR2 1409 aa18.11■□□□□ 0.49
CYSTM1-202ENST00000504227 ZNF521Q96K83 1311 aa18.1■□□□□ 0.49
CYSTM1-202ENST00000504227 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
CYSTM1-202ENST00000504227 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
CYSTM1-202ENST00000504227 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
CYSTM1-202ENST00000504227 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
CYSTM1-202ENST00000504227 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
CYSTM1-202ENST00000504227 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
CYSTM1-202ENST00000504227 MARCH10Q8NA82 808 aaPredicted RBP18.08■□□□□ 0.48
CYSTM1-202ENST00000504227 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.48
CYSTM1-202ENST00000504227 IL16Q14005 1332 aa18.07■□□□□ 0.48
CYSTM1-202ENST00000504227 TEFQ10587 303 aa18.07■□□□□ 0.48
CYSTM1-202ENST00000504227 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
CYSTM1-202ENST00000504227 ERVV-2B6SEH9 535 aa18.06■□□□□ 0.48
CYSTM1-202ENST00000504227 CEMIPQ8WUJ3 1361 aa18.05■□□□□ 0.48
CYSTM1-202ENST00000504227 E9PSI1 815 aa18.05■□□□□ 0.48
CYSTM1-202ENST00000504227 GNAI1P63096 354 aa18.05■□□□□ 0.48
CYSTM1-202ENST00000504227 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
CYSTM1-202ENST00000504227 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
CYSTM1-202ENST00000504227 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
CYSTM1-202ENST00000504227 CABP4P57796 275 aa18.04■□□□□ 0.48
CYSTM1-202ENST00000504227 KRT27Q7Z3Y8 459 aa18.04■□□□□ 0.48
CYSTM1-202ENST00000504227 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
CYSTM1-202ENST00000504227 SLC52A2Q9HAB3 445 aa18.04■□□□□ 0.48
CYSTM1-202ENST00000504227 IFT57Q9NWB7 429 aa18.04■□□□□ 0.48
CYSTM1-202ENST00000504227 KDM6AO15550 1401 aaPredicted RBP18.04■□□□□ 0.48
CYSTM1-202ENST00000504227 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
CYSTM1-202ENST00000504227 CDCA7LQ96GN5 454 aa18.03■□□□□ 0.48
CYSTM1-202ENST00000504227 CFAP44Q96MT7 982 aa18.03■□□□□ 0.48
CYSTM1-202ENST00000504227 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
CYSTM1-202ENST00000504227 NFATC2IPQ8NCF5 419 aa18.02■□□□□ 0.48
CYSTM1-202ENST00000504227 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.48
CYSTM1-202ENST00000504227 CHL1O00533 1208 aa18.01■□□□□ 0.47
CYSTM1-202ENST00000504227 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
CYSTM1-202ENST00000504227 KAT6BQ8WYB5 2073 aa18.01■□□□□ 0.47
CYSTM1-202ENST00000504227 BTBD11A6QL63 1104 aa18■□□□□ 0.47
CYSTM1-202ENST00000504227 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
CYSTM1-202ENST00000504227 TMOD3Q9NYL9 352 aa18■□□□□ 0.47
CYSTM1-202ENST00000504227 PRIM1P49642 420 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms