RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 KANK4Q5T7N3 995 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-217ENST00000504211 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
UBE2D3-217ENST00000504211 NOD1Q9Y239 953 aa11.57□□□□□ -0.56
UBE2D3-217ENST00000504211 CAPN5O15484 640 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-217ENST00000504211 ADD1P35611 737 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-217ENST00000504211 MEIOBQ8N635 442 aa11.56□□□□□ -0.56
UBE2D3-217ENST00000504211 ATP5J2-PTCD1G3V325 749 aa11.55□□□□□ -0.56
UBE2D3-217ENST00000504211 ADH1AP07327 375 aa11.55□□□□□ -0.56
UBE2D3-217ENST00000504211 CBLBQ13191 982 aa11.55□□□□□ -0.56
UBE2D3-217ENST00000504211 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
UBE2D3-217ENST00000504211 PBXIP1Q96AQ6 731 aa11.55□□□□□ -0.56
UBE2D3-217ENST00000504211 ARID3AQ99856 593 aa11.55□□□□□ -0.56
UBE2D3-217ENST00000504211 MKRN1Q9UHC7 482 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-217ENST00000504211 RFX1P22670 979 aa11.54□□□□□ -0.56
UBE2D3-217ENST00000504211 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-217ENST00000504211 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
UBE2D3-217ENST00000504211 VRTNQ9H8Y1 702 aa11.53□□□□□ -0.56
UBE2D3-217ENST00000504211 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
UBE2D3-217ENST00000504211 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-217ENST00000504211 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
UBE2D3-217ENST00000504211 GTF2IP78347 998 aa11.51□□□□□ -0.57
UBE2D3-217ENST00000504211 CLDN10P78369 228 aa11.51□□□□□ -0.57
UBE2D3-217ENST00000504211 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-217ENST00000504211 ESF1Q9H501 851 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-217ENST00000504211 FAM196BA6NMK8 535 aa11.5□□□□□ -0.57
UBE2D3-217ENST00000504211 AXIN1O15169 862 aa11.49□□□□□ -0.57
UBE2D3-217ENST00000504211 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
UBE2D3-217ENST00000504211 AAASQ9NRG9 546 aa11.49□□□□□ -0.57
UBE2D3-217ENST00000504211 GNRH1P01148 92 aa11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 RASA1P20936 1047 aa11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 CRTC2Q53ET0 693 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 SIX5Q8N196 739 aa11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 LARGE2Q8N3Y3 721 aa11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 TSEN34Q9BSV6 310 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 DNAAF2Q9NVR5 837 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 KIAA1024Q9UPX6 916 aa11.48□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L10C9JJH3 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L12C9JPN9 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L21D6R901 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 WASLO00401 505 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 ZBTB7BO15156 539 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 ATG7O95352 703 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 PTGIRP43119 386 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 PTK7Q13308 1070 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 LINC00528Q8N1L1 170 aa11.47□□□□□ -0.57
UBE2D3-217ENST00000504211 DKK1O94907 266 aa11.46□□□□□ -0.57
UBE2D3-217ENST00000504211 SCNN1DP51172 638 aa11.46□□□□□ -0.57
UBE2D3-217ENST00000504211 ELOAQ14241 798 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-217ENST00000504211 LARP1Q6PKG0 1096 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-217ENST00000504211 AGBL1Q96MI9 1066 aa11.46□□□□□ -0.57
UBE2D3-217ENST00000504211 ST8SIA5O15466 376 aa11.45□□□□□ -0.58
UBE2D3-217ENST00000504211 TRIM46Q7Z4K8 759 aa11.45□□□□□ -0.58
UBE2D3-217ENST00000504211 RELBQ01201 579 aa11.44□□□□□ -0.58
UBE2D3-217ENST00000504211 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
UBE2D3-217ENST00000504211 ETNK1Q9HBU6 452 aa11.44□□□□□ -0.58
UBE2D3-217ENST00000504211 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
UBE2D3-217ENST00000504211 SPINT1O43278 529 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 UPP2O95045 317 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 BMP1P13497 986 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 PSME1Q06323 249 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 CLN3Q13286 438 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 CCDC102BQ68D86 513 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 Q6ZNB5 142 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 ZNF594Q96JF6 807 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 ARXQ96QS3 562 aa11.43□□□□□ -0.58
UBE2D3-217ENST00000504211 A0A1W2PRU2 124 aa11.42□□□□□ -0.58
UBE2D3-217ENST00000504211 TMEM229AB2RXF0 380 aa11.42□□□□□ -0.58
UBE2D3-217ENST00000504211 LCE2BO14633 110 aa11.42□□□□□ -0.58
UBE2D3-217ENST00000504211 GDF10P55107 478 aa11.42□□□□□ -0.58
UBE2D3-217ENST00000504211 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
UBE2D3-217ENST00000504211 ANKMY2Q8IV38 441 aa11.42□□□□□ -0.58
UBE2D3-217ENST00000504211 STAU1O95793 577 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 IL2RAP01589 272 aa11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 INHAP05111 366 aa11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 ATP13A2Q9NQ11 1180 aa11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 ZMIZ1Q9ULJ6 1067 aa11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 NOVA2Q9UNW9 492 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 HRH3Q9Y5N1 445 aa11.41□□□□□ -0.58
UBE2D3-217ENST00000504211 ZNF395Q9H8N7 513 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-217ENST00000504211 RAB6BQ9NRW1 208 aa11.4□□□□□ -0.58
UBE2D3-217ENST00000504211 M0R2N6 131 aa11.39□□□□□ -0.59
UBE2D3-217ENST00000504211 BMP2P12643 396 aa11.39□□□□□ -0.59
UBE2D3-217ENST00000504211 DPYDQ12882 1025 aa11.39□□□□□ -0.59
UBE2D3-217ENST00000504211 ESYT1Q9BSJ8 1104 aa11.39□□□□□ -0.59
UBE2D3-217ENST00000504211 ZNF358Q9NW07 568 aa11.39□□□□□ -0.59
UBE2D3-217ENST00000504211 DACH1Q9UI36 760 aa11.39□□□□□ -0.59
UBE2D3-217ENST00000504211 SEC13P55735 322 aa11.38□□□□□ -0.59
UBE2D3-217ENST00000504211 SCARF1Q14162 830 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms