RNA–Protein interactions for RNA: ENST00000504162.1

CDK18-212, Transcript of cyclin dependent kinase 18, humanhuman

TSL 4

Gene CDK18, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-212ENST00000504162 KIF20BQ96Q89 1820 aa29.6■■■□□ 2.33
CDK18-212ENST00000504162 PRIM1P49642 420 aaKnown RBP29.6■■■□□ 2.33
CDK18-212ENST00000504162 KCNQ4P56696 695 aa29.6■■■□□ 2.33
CDK18-212ENST00000504162 NBPF6Q5VWK0 638 aa29.6■■■□□ 2.33
CDK18-212ENST00000504162 NBPF4Q96M43 638 aa29.6■■■□□ 2.33
CDK18-212ENST00000504162 DCAF8L1A6NGE4 600 aa29.58■■■□□ 2.33
CDK18-212ENST00000504162 RTL1A6NKG5 1358 aa29.58■■■□□ 2.33
CDK18-212ENST00000504162 TMF1P82094 1093 aa29.58■■■□□ 2.33
CDK18-212ENST00000504162 USHBP1Q8N6Y0 703 aa29.57■■■□□ 2.32
CDK18-212ENST00000504162 ZCRB1Q8TBF4 217 aaKnown RBP29.57■■■□□ 2.32
CDK18-212ENST00000504162 COL24A1Q17RW2 1714 aa29.57■■■□□ 2.32
CDK18-212ENST00000504162 TRIM26Q12899 539 aaPredicted RBP29.56■■■□□ 2.32
CDK18-212ENST00000504162 SLC27A3Q5K4L6 730 aa29.55■■■□□ 2.32
CDK18-212ENST00000504162 SYTL4Q96C24 671 aaPredicted RBP29.55■■■□□ 2.32
CDK18-212ENST00000504162 ARXQ96QS3 562 aa29.54■■■□□ 2.32
CDK18-212ENST00000504162 PNPLA7Q6ZV29 1317 aa29.52■■■□□ 2.32
CDK18-212ENST00000504162 CARD14Q9BXL6 1004 aa29.52■■■□□ 2.32
CDK18-212ENST00000504162 HSP90AB2PQ58FF8 381 aa29.51■■■□□ 2.31
CDK18-212ENST00000504162 CHD4Q14839 1912 aa29.48■■■□□ 2.31
CDK18-212ENST00000504162 INSRP06213 1382 aa29.48■■■□□ 2.31
CDK18-212ENST00000504162 MAP3K5Q99683 1374 aa29.48■■■□□ 2.31
CDK18-212ENST00000504162 SLC16A10Q8TF71 515 aa29.44■■■□□ 2.3
CDK18-212ENST00000504162 TFCP2L1Q9NZI6 479 aa29.44■■■□□ 2.3
CDK18-212ENST00000504162 SMG6Q86US8 1419 aaKnown RBP29.44■■■□□ 2.3
CDK18-212ENST00000504162 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
CDK18-212ENST00000504162 GOLGB1Q14789 3259 aaKnown RBP29.43■■■□□ 2.3
CDK18-212ENST00000504162 FLT4P35916 1363 aa29.43■■■□□ 2.3
CDK18-212ENST00000504162 RAPGEF4Q8WZA2 1011 aa29.43■■■□□ 2.3
CDK18-212ENST00000504162 TOGARAM1Q9Y4F4 1720 aa29.42■■■□□ 2.3
CDK18-212ENST00000504162 CCNL1Q9UK58 526 aaPredicted RBP29.42■■■□□ 2.3
CDK18-212ENST00000504162 EMILIN1Q9Y6C2 1016 aa29.42■■■□□ 2.3
CDK18-212ENST00000504162 NSD3Q9BZ95 1437 aa29.42■■■□□ 2.3
CDK18-212ENST00000504162 ITGB4P16144 1822 aa29.41■■■□□ 2.3
CDK18-212ENST00000504162 TATP17735 454 aaPredicted RBP29.41■■■□□ 2.3
CDK18-212ENST00000504162 CDCA8Q53HL2 280 aa29.41■■■□□ 2.3
CDK18-212ENST00000504162 ANKRD26Q9UPS8 1709 aa29.41■■■□□ 2.3
CDK18-212ENST00000504162 KIF24Q5T7B8 1368 aa29.4■■■□□ 2.3
CDK18-212ENST00000504162 TAF1LQ8IZX4 1826 aa29.4■■■□□ 2.3
CDK18-212ENST00000504162 PKD1L3Q7Z443 1732 aa29.4■■■□□ 2.3
CDK18-212ENST00000504162 MAP2P11137 1827 aaKnown RBP29.39■■■□□ 2.3
CDK18-212ENST00000504162 CYP27B1O15528 508 aa29.39■■■□□ 2.3
CDK18-212ENST00000504162 ZNF784Q8NCA9 323 aaPredicted RBP29.39■■■□□ 2.3
CDK18-212ENST00000504162 C5P01031 1676 aa29.39■■■□□ 2.3
CDK18-212ENST00000504162 NCAPD2Q15021 1401 aa29.37■■■□□ 2.29
CDK18-212ENST00000504162 COL23A1Q86Y22 540 aaPredicted RBP29.36■■■□□ 2.29
CDK18-212ENST00000504162 PCDH11XQ9BZA7 1347 aa29.36■■■□□ 2.29
CDK18-212ENST00000504162 PCDH11YQ9BZA8 1340 aa29.36■■■□□ 2.29
CDK18-212ENST00000504162 POLD1P28340 1107 aa29.34■■■□□ 2.29
CDK18-212ENST00000504162 KLHL34Q8N239 644 aa29.33■■■□□ 2.29
CDK18-212ENST00000504162 NLGN2Q8NFZ4 835 aa29.33■■■□□ 2.29
CDK18-212ENST00000504162 MPRIPQ6WCQ1 1025 aa29.31■■■□□ 2.28
CDK18-212ENST00000504162 PALLDQ8WX93 1383 aa29.3■■■□□ 2.28
CDK18-212ENST00000504162 PPM1GO15355 546 aaPredicted RBP29.29■■■□□ 2.28
CDK18-212ENST00000504162 GPR162Q16538 588 aa29.29■■■□□ 2.28
CDK18-212ENST00000504162 TIMELESSQ9UNS1 1208 aa29.29■■■□□ 2.28
CDK18-212ENST00000504162 WASHC2AQ641Q2 1341 aa29.28■■■□□ 2.28
CDK18-212ENST00000504162 MSH5O43196 834 aa29.27■■■□□ 2.28
CDK18-212ENST00000504162 MSL1Q68DK7 614 aa29.27■■■□□ 2.28
CDK18-212ENST00000504162 AMIGO3Q86WK7 504 aa29.27■■■□□ 2.28
CDK18-212ENST00000504162 EYA1Q99502 592 aa29.27■■■□□ 2.28
CDK18-212ENST00000504162 C4BP0C0L5 1744 aa29.26■■■□□ 2.27
CDK18-212ENST00000504162 POLKQ9UBT6 870 aa29.26■■■□□ 2.27
CDK18-212ENST00000504162 NKX1-1Q15270 411 aaPredicted RBP29.25■■■□□ 2.27
CDK18-212ENST00000504162 PIGBQ92521 554 aa29.25■■■□□ 2.27
CDK18-212ENST00000504162 UBR3Q6ZT12 1888 aa29.25■■■□□ 2.27
CDK18-212ENST00000504162 SMIM5Q71RC9 77 aa29.23■■■□□ 2.27
CDK18-212ENST00000504162 PELP1Q8IZL8 1130 aaKnown RBP29.22■■■□□ 2.27
CDK18-212ENST00000504162 PCGF6Q9BYE7 350 aa29.21■■■□□ 2.27
CDK18-212ENST00000504162 YBX3P16989 372 aaKnown RBP eCLIP29.2■■■□□ 2.26
CDK18-212ENST00000504162 POLR3GLQ9BT43 218 aa29.19■■■□□ 2.26
CDK18-212ENST00000504162 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
CDK18-212ENST00000504162 CLSPNQ9HAW4 1339 aa29.19■■■□□ 2.26
CDK18-212ENST00000504162 SMARCC1Q92922 1105 aaPredicted RBP29.18■■■□□ 2.26
CDK18-212ENST00000504162 TNNT2P45379 298 aaPredicted RBP29.17■■■□□ 2.26
CDK18-212ENST00000504162 EIF4A2Q14240 407 aaKnown RBP29.17■■■□□ 2.26
CDK18-212ENST00000504162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.16■■■□□ 2.26
CDK18-212ENST00000504162 PHKG2P15735 406 aa29.14■■■□□ 2.26
CDK18-212ENST00000504162 LINC00116Q8NCU8 138 aa29.14■■■□□ 2.26
CDK18-212ENST00000504162 FLAD1Q8NFF5 587 aa29.14■■■□□ 2.26
CDK18-212ENST00000504162 ASAP1Q9ULH1 1129 aa29.14■■■□□ 2.26
CDK18-212ENST00000504162 LOC102724428A0A0B4J2F2 783 aa29.12■■■□□ 2.25
CDK18-212ENST00000504162 HSPA5P11021 654 aaKnown RBP29.12■■■□□ 2.25
CDK18-212ENST00000504162 SIK1P57059 783 aa29.12■■■□□ 2.25
CDK18-212ENST00000504162 AK7Q96M32 723 aa29.12■■■□□ 2.25
CDK18-212ENST00000504162 PHF14O94880 888 aa29.11■■■□□ 2.25
CDK18-212ENST00000504162 ITPK1Q13572 414 aa29.11■■■□□ 2.25
CDK18-212ENST00000504162 IFNL2Q8IZJ0 200 aa29.1■■■□□ 2.25
CDK18-212ENST00000504162 TMOD3Q9NYL9 352 aa29.1■■■□□ 2.25
CDK18-212ENST00000504162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.09■■■□□ 2.25
CDK18-212ENST00000504162 PANK3Q9H999 370 aa29.09■■■□□ 2.25
CDK18-212ENST00000504162 CD2APQ9Y5K6 639 aa29.09■■■□□ 2.25
CDK18-212ENST00000504162 C1QTNF8P60827 252 aa29.08■■■□□ 2.25
CDK18-212ENST00000504162 ATG3Q9NT62 314 aa29.08■■■□□ 2.25
CDK18-212ENST00000504162 IGSF1Q8N6C5 1336 aa29.08■■■□□ 2.25
CDK18-212ENST00000504162 HMGB2P26583 209 aaKnown RBP29.07■■■□□ 2.24
CDK18-212ENST00000504162 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
CDK18-212ENST00000504162 GRIN3BO60391 1043 aa29.05■■■□□ 2.24
CDK18-212ENST00000504162 SSFA2P28290 1259 aa29.04■■■□□ 2.24
CDK18-212ENST00000504162 ATP6V1AP38606 617 aa29.03■■■□□ 2.24
CDK18-212ENST00000504162 SLC4A9Q96Q91 983 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms