RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SGSM3Q96HU1 749 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 TSPAN18Q96SJ8 248 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 DONSONQ9NYP3 566 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 FRAT2O75474 233 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-204ENST00000504131 ITFG2Q969R8 447 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 RSRC1Q96IZ7 334 aaKnown RBP7.37□□□□□ -1.23
CLCN3-204ENST00000504131 SH3GL3Q99963 347 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 EXOC1Q9NV70 894 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 OFD1O75665 1012 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 IRX1P78414 480 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-204ENST00000504131 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 KLHL23Q8NBE8 558 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 GABPB1Q06547 395 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-204ENST00000504131 C17orf50Q8WW18 174 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 KCNH8Q96L42 1107 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 IRF6O14896 467 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 PSMC1P62191 440 aaKnown RBP7.36□□□□□ -1.23
CLCN3-204ENST00000504131 MYLK4Q86YV6 388 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-204ENST00000504131 CCDC146Q8IYE0 955 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 OGFOD1Q8N543 542 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 FOXD4L1Q9NU39 408 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 CADPSQ9ULU8 1353 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 CCDC196A0A1B0GTZ2 297 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 VPS37AQ8NEZ2 397 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 KCNV2Q8TDN2 545 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 UBA5Q9GZZ9 404 aa7.36□□□□□ -1.23
CLCN3-204ENST00000504131 FBXO9Q9UK97 447 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-204ENST00000504131 RANBP1P43487 201 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 TAOK3Q9H2K8 898 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 PSEN1P49768 467 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 DCTN1Q14203 1278 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 GBP7Q8N8V2 638 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-204ENST00000504131 ABCC8Q09428 1581 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 CCDC73Q6ZRK6 1079 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 CENPHQ9H3R5 247 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 PRR29P0C7W0 189 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 HSP90B2PQ58FF3 399 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 TTC30BQ8N4P2 665 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 GOLGA6L9A6NEM1 432 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 PDCD2Q16342 344 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-204ENST00000504131 HOOK3Q86VS8 718 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 FAM107BQ9H098 131 aa7.35□□□□□ -1.23
CLCN3-204ENST00000504131 KIF3BO15066 747 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 DESP17661 470 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 SMC2O95347 1197 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 PAX7P23759 505 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 NASPP49321 788 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-204ENST00000504131 WDR63Q8IWG1 891 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 TMCO5AQ8N6Q1 288 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 GRPEL1Q9HAV7 217 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 BIVM-ERCC5R4GMW8 1640 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 NAA25Q14CX7 972 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-204ENST00000504131 CCDC114Q96M63 670 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 KLHL42Q9P2K6 505 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 COMMD10Q9Y6G5 202 aa7.34□□□□□ -1.23
CLCN3-204ENST00000504131 ATAD2BQ9ULI0 1458 aa7.34□□□□□ -1.24
CLCN3-204ENST00000504131 CDKL5O76039 1030 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 TRAF1Q13077 416 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 LRRC23Q53EV4 343 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 CCDC125Q86Z20 511 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 JRKLQ9Y4A0 524 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 ARIH1Q9Y4X5 557 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 TSR1Q2NL82 804 aaKnown RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 OGFRQ9NZT2 677 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 TRIM17Q9Y577 477 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 CEP164Q9UPV0 1460 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 MTA1Q13330 715 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 RETREG2Q8NC44 543 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 PMFBP1Q8TBY8 1022 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 LRRC27Q9C0I9 530 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 UTP6Q9NYH9 597 aaKnown RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 PUF60Q9UHX1 559 aaKnown RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 COPB2P35606 906 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 CLNS1AP54105 237 aaKnown RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 HDGFL2Q7Z4V5 671 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 KRT222Q8N1A0 295 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 C1orf131Q8NDD1 294 aaKnown RBP7.33□□□□□ -1.24
CLCN3-204ENST00000504131 NUCB1Q02818 461 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 STAG3Q9UJ98 1225 aa7.33□□□□□ -1.24
CLCN3-204ENST00000504131 VCAM1P19320 739 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 FLT3P36888 993 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 RRP12Q5JTH9 1297 aaKnown RBP7.32□□□□□ -1.24
CLCN3-204ENST00000504131 LMBRD2Q68DH5 695 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-204ENST00000504131 RBM5P52756 815 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLCN3-204ENST00000504131 USP33Q8TEY7 942 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 CLUAP1Q96AJ1 413 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 C6orf203Q9P0P8 240 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-204ENST00000504131 SATB2Q9UPW6 733 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 BLVRAP53004 296 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 CFAP58Q5T655 872 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 VMP1Q96GC9 406 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 TRIM4Q9C037 500 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 DIS3Q9Y2L1 958 aaKnown RBP7.32□□□□□ -1.24
CLCN3-204ENST00000504131 RLBP1P12271 317 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 TBC1D31Q96DN5 1066 aa7.32□□□□□ -1.24
CLCN3-204ENST00000504131 CDC5LQ99459 802 aaKnown RBP7.32□□□□□ -1.24
CLCN3-204ENST00000504131 ITM2BQ9Y287 266 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms