RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 HTATSF1O43719 755 aaKnown RBP27.27■■□□□ 1.96
UBE2D3-216ENST00000503742 ARHGEF25Q86VW2 580 aa27.27■■□□□ 1.96
UBE2D3-216ENST00000503742 ARHGAP45Q92619 1136 aa27.27■■□□□ 1.96
UBE2D3-216ENST00000503742 ELL2O00472 640 aaPredicted RBP27.26■■□□□ 1.95
UBE2D3-216ENST00000503742 DDX19BQ9UMR2 479 aa27.26■■□□□ 1.95
UBE2D3-216ENST00000503742 KIAA0232Q92628 1395 aa27.26■■□□□ 1.95
UBE2D3-216ENST00000503742 LRRC37A3O60309 1634 aa27.25■■□□□ 1.95
UBE2D3-216ENST00000503742 RTF1Q92541 710 aaKnown RBP27.25■■□□□ 1.95
UBE2D3-216ENST00000503742 TMEM57Q8N5G2 664 aa27.24■■□□□ 1.95
UBE2D3-216ENST00000503742 XIRP1Q702N8 1843 aaKnown RBP27.24■■□□□ 1.95
UBE2D3-216ENST00000503742 CADPS2Q86UW7 1296 aa27.24■■□□□ 1.95
UBE2D3-216ENST00000503742 PDE4AP27815 886 aa27.23■■□□□ 1.95
UBE2D3-216ENST00000503742 MSH6P52701 1360 aa27.22■■□□□ 1.95
UBE2D3-216ENST00000503742 ITPRIPQ8IWB1 547 aa27.22■■□□□ 1.95
UBE2D3-216ENST00000503742 BACH2Q9BYV9 841 aa27.22■■□□□ 1.95
UBE2D3-216ENST00000503742 NBPF6Q5VWK0 638 aa27.21■■□□□ 1.95
UBE2D3-216ENST00000503742 NBPF4Q96M43 638 aa27.21■■□□□ 1.95
UBE2D3-216ENST00000503742 RGPD2P0DJD1 1756 aa27.21■■□□□ 1.95
UBE2D3-216ENST00000503742 GNAT3A8MTJ3 354 aa27.2■■□□□ 1.94
UBE2D3-216ENST00000503742 HAP1P54257 671 aaPredicted RBP27.2■■□□□ 1.94
UBE2D3-216ENST00000503742 LMOD2Q6P5Q4 547 aa27.2■■□□□ 1.94
UBE2D3-216ENST00000503742 USHBP1Q8N6Y0 703 aa27.2■■□□□ 1.94
UBE2D3-216ENST00000503742 NCAPD2Q15021 1401 aa27.19■■□□□ 1.94
UBE2D3-216ENST00000503742 MED1Q15648 1581 aaPredicted RBP27.19■■□□□ 1.94
UBE2D3-216ENST00000503742 MAP3K5Q99683 1374 aa27.18■■□□□ 1.94
UBE2D3-216ENST00000503742 KRT24Q2M2I5 525 aa27.18■■□□□ 1.94
UBE2D3-216ENST00000503742 ZBTB40Q9NUA8 1239 aa27.18■■□□□ 1.94
UBE2D3-216ENST00000503742 ANP32EQ9BTT0 268 aa27.17■■□□□ 1.94
UBE2D3-216ENST00000503742 RWDD1Q9H446 243 aaPredicted RBP27.17■■□□□ 1.94
UBE2D3-216ENST00000503742 ZBTB7CA1YPR0 619 aa27.17■■□□□ 1.94
UBE2D3-216ENST00000503742 ABCC4O15439 1325 aa27.16■■□□□ 1.94
UBE2D3-216ENST00000503742 CAMTA1Q9Y6Y1 1673 aa27.15■■□□□ 1.94
UBE2D3-216ENST00000503742 NPHP3Q7Z494 1330 aa27.15■■□□□ 1.94
UBE2D3-216ENST00000503742 TSPYL4Q9UJ04 414 aa27.15■■□□□ 1.94
UBE2D3-216ENST00000503742 IL17REQ8NFR9 667 aa27.14■■□□□ 1.94
UBE2D3-216ENST00000503742 MIS18AQ9NYP9 233 aa27.14■■□□□ 1.94
UBE2D3-216ENST00000503742 DDX17Q92841 729 aaKnown RBP27.13■■□□□ 1.93
UBE2D3-216ENST00000503742 HDAC1Q13547 482 aaPredicted RBP27.13■■□□□ 1.93
UBE2D3-216ENST00000503742 LRRC59Q96AG4 307 aaKnown RBP27.13■■□□□ 1.93
UBE2D3-216ENST00000503742 API5Q9BZZ5 524 aaKnown RBP27.13■■□□□ 1.93
UBE2D3-216ENST00000503742 PXDNQ92626 1479 aa27.12■■□□□ 1.93
UBE2D3-216ENST00000503742 RGS3P49796 1198 aa27.12■■□□□ 1.93
UBE2D3-216ENST00000503742 ANKRD24Q8TF21 1146 aa27.11■■□□□ 1.93
UBE2D3-216ENST00000503742 BABAM1Q9NWV8 329 aa27.11■■□□□ 1.93
UBE2D3-216ENST00000503742 AXIN2Q9Y2T1 843 aa27.11■■□□□ 1.93
UBE2D3-216ENST00000503742 TNS3Q68CZ2 1445 aa27.1■■□□□ 1.93
UBE2D3-216ENST00000503742 RGPD5Q99666 1765 aa27.1■■□□□ 1.93
UBE2D3-216ENST00000503742 ZBTB7BO15156 539 aaPredicted RBP27.09■■□□□ 1.93
UBE2D3-216ENST00000503742 PLEKHG5O94827 1062 aa27.09■■□□□ 1.93
UBE2D3-216ENST00000503742 CEMIPQ8WUJ3 1361 aa27.09■■□□□ 1.93
UBE2D3-216ENST00000503742 CHMP4BQ9H444 224 aaKnown RBP27.08■■□□□ 1.93
UBE2D3-216ENST00000503742 LMO7Q8WWI1 1683 aa27.08■■□□□ 1.93
UBE2D3-216ENST00000503742 MSH5O43196 834 aa27.07■■□□□ 1.92
UBE2D3-216ENST00000503742 RGS12O14924 1447 aa27.07■■□□□ 1.92
UBE2D3-216ENST00000503742 CRYBG1Q9Y4K1 1723 aa27.06■■□□□ 1.92
UBE2D3-216ENST00000503742 TAF7Q15545 349 aaPredicted RBP27.06■■□□□ 1.92
UBE2D3-216ENST00000503742 FAM161AQ3B820 660 aa27.06■■□□□ 1.92
UBE2D3-216ENST00000503742 PDZRN3Q9UPQ7 1066 aa27.06■■□□□ 1.92
UBE2D3-216ENST00000503742 COL18A1P39060 1754 aa27.05■■□□□ 1.92
UBE2D3-216ENST00000503742 SPATA31A3Q5VYP0 1347 aa27.05■■□□□ 1.92
UBE2D3-216ENST00000503742 ZNF335Q9H4Z2 1342 aaPredicted RBP27.05■■□□□ 1.92
UBE2D3-216ENST00000503742 ZC3H6P61129 1189 aaKnown RBP27.04■■□□□ 1.92
UBE2D3-216ENST00000503742 PTPRCP08575 1304 aa27.04■■□□□ 1.92
UBE2D3-216ENST00000503742 ERBB3P21860 1342 aa27.04■■□□□ 1.92
UBE2D3-216ENST00000503742 C8orf34Q49A92 452 aa27.04■■□□□ 1.92
UBE2D3-216ENST00000503742 AMOTQ4VCS5 1084 aa27.04■■□□□ 1.92
UBE2D3-216ENST00000503742 PLEKHO1Q53GL0 409 aaPredicted RBP27.04■■□□□ 1.92
UBE2D3-216ENST00000503742 BRINP3Q76B58 766 aa27.04■■□□□ 1.92
UBE2D3-216ENST00000503742 SOS1Q07889 1333 aaPredicted RBP27.02■■□□□ 1.92
UBE2D3-216ENST00000503742 AKAP4Q5JQC9 854 aa27.02■■□□□ 1.92
UBE2D3-216ENST00000503742 INTS3Q68E01 1043 aaKnown RBP27.02■■□□□ 1.92
UBE2D3-216ENST00000503742 SMC5Q8IY18 1101 aa27.02■■□□□ 1.92
UBE2D3-216ENST00000503742 ABCC6O95255 1503 aa27.01■■□□□ 1.92
UBE2D3-216ENST00000503742 SLC4A2P04920 1241 aa27■■□□□ 1.91
UBE2D3-216ENST00000503742 ANP32AP39687 249 aaKnown RBP27■■□□□ 1.91
UBE2D3-216ENST00000503742 ZNF530Q6P9A1 599 aaPredicted RBP26.99■■□□□ 1.91
UBE2D3-216ENST00000503742 LGR6Q9HBX8 967 aa26.98■■□□□ 1.91
UBE2D3-216ENST00000503742 FAM208AQ9UK61 1670 aaKnown RBP26.98■■□□□ 1.91
UBE2D3-216ENST00000503742 KDM3BQ7LBC6 1761 aa26.97■■□□□ 1.91
UBE2D3-216ENST00000503742 VIRMAQ69YN4 1812 aaKnown RBP26.97■■□□□ 1.91
UBE2D3-216ENST00000503742 CABLES1Q8TDN4 633 aa26.97■■□□□ 1.91
UBE2D3-216ENST00000503742 SLAIN2Q9P270 581 aa26.97■■□□□ 1.91
UBE2D3-216ENST00000503742 OVOS2A0A0G2JMS6 1433 aa26.96■■□□□ 1.91
UBE2D3-216ENST00000503742 CACNA1FO60840 1977 aa26.96■■□□□ 1.91
UBE2D3-216ENST00000503742 CPDO75976 1380 aa26.96■■□□□ 1.91
UBE2D3-216ENST00000503742 SOS2Q07890 1332 aaPredicted RBP26.94■■□□□ 1.9
UBE2D3-216ENST00000503742 CCDC30Q5VVM6 783 aa26.94■■□□□ 1.9
UBE2D3-216ENST00000503742 G2E3Q7L622 706 aa26.93■■□□□ 1.9
UBE2D3-216ENST00000503742 ADAMTS7Q9UKP4 1686 aa26.92■■□□□ 1.9
UBE2D3-216ENST00000503742 RNMTO43148 476 aaKnown RBP26.92■■□□□ 1.9
UBE2D3-216ENST00000503742 C1orf141Q5JVX7 400 aa26.92■■□□□ 1.9
UBE2D3-216ENST00000503742 STK31Q9BXU1 1019 aa26.92■■□□□ 1.9
UBE2D3-216ENST00000503742 C1orf115Q9H7X2 142 aa26.92■■□□□ 1.9
UBE2D3-216ENST00000503742 IPO9Q96P70 1041 aaKnown RBP26.91■■□□□ 1.9
UBE2D3-216ENST00000503742 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
UBE2D3-216ENST00000503742 SIRT2Q8IXJ6 389 aa26.9■■□□□ 1.9
UBE2D3-216ENST00000503742 EIF4A1P60842 406 aaKnown RBP26.89■■□□□ 1.9
UBE2D3-216ENST00000503742 NUCB1Q02818 461 aa26.89■■□□□ 1.89
UBE2D3-216ENST00000503742 TEFQ10587 303 aa26.89■■□□□ 1.89
UBE2D3-216ENST00000503742 NPM2Q86SE8 214 aaKnown RBP26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms