RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 IP6K1Q92551 441 aa22.45■■□□□ 1.18
DDR1-250ENST00000503628 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
DDR1-250ENST00000503628 LY75O60449 1722 aa22.43■■□□□ 1.18
DDR1-250ENST00000503628 ANKRD36BQ8N2N9 1353 aa22.42■■□□□ 1.18
DDR1-250ENST00000503628 GRIN3BO60391 1043 aa22.42■■□□□ 1.18
DDR1-250ENST00000503628 EDC4Q6P2E9 1401 aaKnown RBP22.41■■□□□ 1.18
DDR1-250ENST00000503628 DOT1LQ8TEK3 1739 aa22.41■■□□□ 1.18
DDR1-250ENST00000503628 MSH5O43196 834 aa22.41■■□□□ 1.18
DDR1-250ENST00000503628 NSD2O96028 1365 aa22.4■■□□□ 1.18
DDR1-250ENST00000503628 COL23A1Q86Y22 540 aaPredicted RBP22.4■■□□□ 1.18
DDR1-250ENST00000503628 CCNL1Q9UK58 526 aaPredicted RBP22.4■■□□□ 1.18
DDR1-250ENST00000503628 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.18
DDR1-250ENST00000503628 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.17
DDR1-250ENST00000503628 ZCRB1Q8TBF4 217 aaKnown RBP22.38■■□□□ 1.17
DDR1-250ENST00000503628 RGPD2P0DJD1 1756 aa22.37■■□□□ 1.17
DDR1-250ENST00000503628 A0A1W2PP64 1363 aa22.37■■□□□ 1.17
DDR1-250ENST00000503628 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
DDR1-250ENST00000503628 FBLN1P23142 703 aa22.35■■□□□ 1.17
DDR1-250ENST00000503628 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
DDR1-250ENST00000503628 MAP3K19Q56UN5 1328 aa22.34■■□□□ 1.17
DDR1-250ENST00000503628 ATP10DQ9P241 1426 aa22.34■■□□□ 1.17
DDR1-250ENST00000503628 HOXC9P31274 260 aa22.34■■□□□ 1.17
DDR1-250ENST00000503628 AMPHP49418 695 aa22.33■■□□□ 1.17
DDR1-250ENST00000503628 USP47Q96K76 1375 aa22.33■■□□□ 1.17
DDR1-250ENST00000503628 MEGF6O75095 1541 aa22.32■■□□□ 1.16
DDR1-250ENST00000503628 COG3Q96JB2 828 aa22.31■■□□□ 1.16
DDR1-250ENST00000503628 GPBP1L1Q9HC44 474 aaPredicted RBP22.3■■□□□ 1.16
DDR1-250ENST00000503628 CD2APQ9Y5K6 639 aa22.3■■□□□ 1.16
DDR1-250ENST00000503628 PUS7Q96PZ0 661 aaKnown RBP22.29■■□□□ 1.16
DDR1-250ENST00000503628 NBPF6Q5VWK0 638 aa22.28■■□□□ 1.16
DDR1-250ENST00000503628 NBPF4Q96M43 638 aa22.28■■□□□ 1.16
DDR1-250ENST00000503628 USHBP1Q8N6Y0 703 aa22.27■■□□□ 1.16
DDR1-250ENST00000503628 ZNF526Q8TF50 670 aaPredicted RBP22.27■■□□□ 1.16
DDR1-250ENST00000503628 C5P01031 1676 aa22.26■■□□□ 1.15
DDR1-250ENST00000503628 FLAD1Q8NFF5 587 aa22.25■■□□□ 1.15
DDR1-250ENST00000503628 TAF1LQ8IZX4 1826 aa22.24■■□□□ 1.15
DDR1-250ENST00000503628 HSPA6P17066 643 aa22.24■■□□□ 1.15
DDR1-250ENST00000503628 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
DDR1-250ENST00000503628 ADCY9O60503 1353 aa22.24■■□□□ 1.15
DDR1-250ENST00000503628 RRS1Q15050 365 aaKnown RBP22.23■■□□□ 1.15
DDR1-250ENST00000503628 RAPGEF4Q8WZA2 1011 aa22.23■■□□□ 1.15
DDR1-250ENST00000503628 TATP17735 454 aaPredicted RBP22.21■■□□□ 1.15
DDR1-250ENST00000503628 MPRIPQ6WCQ1 1025 aa22.21■■□□□ 1.15
DDR1-250ENST00000503628 WWC3Q9ULE0 1092 aa22.21■■□□□ 1.15
DDR1-250ENST00000503628 PALLDQ8WX93 1383 aa22.21■■□□□ 1.15
DDR1-250ENST00000503628 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
DDR1-250ENST00000503628 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
DDR1-250ENST00000503628 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
DDR1-250ENST00000503628 AMIGO3Q86WK7 504 aa22.19■■□□□ 1.14
DDR1-250ENST00000503628 IGSF1Q8N6C5 1336 aa22.18■■□□□ 1.14
DDR1-250ENST00000503628 TESK2Q96S53 571 aa22.18■■□□□ 1.14
DDR1-250ENST00000503628 C4BP0C0L5 1744 aa22.17■■□□□ 1.14
DDR1-250ENST00000503628 PCDH11XQ9BZA7 1347 aa22.17■■□□□ 1.14
DDR1-250ENST00000503628 PCDH11YQ9BZA8 1340 aa22.17■■□□□ 1.14
DDR1-250ENST00000503628 AK7Q96M32 723 aa22.17■■□□□ 1.14
DDR1-250ENST00000503628 GGNBP2Q9H3C7 697 aa22.17■■□□□ 1.14
DDR1-250ENST00000503628 ITGB4P16144 1822 aa22.16■■□□□ 1.14
DDR1-250ENST00000503628 FYB1O15117 783 aa22.16■■□□□ 1.14
DDR1-250ENST00000503628 PHF14O94880 888 aa22.16■■□□□ 1.14
DDR1-250ENST00000503628 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
DDR1-250ENST00000503628 ST20-MTHFSA0A0A6YYL1 179 aa22.15■■□□□ 1.14
DDR1-250ENST00000503628 CYP27B1O15528 508 aa22.15■■□□□ 1.14
DDR1-250ENST00000503628 HSP90AB2PQ58FF8 381 aa22.15■■□□□ 1.14
DDR1-250ENST00000503628 SMARCC1Q92922 1105 aaPredicted RBP22.15■■□□□ 1.14
DDR1-250ENST00000503628 UBR3Q6ZT12 1888 aa22.15■■□□□ 1.14
DDR1-250ENST00000503628 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.14
DDR1-250ENST00000503628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.14■■□□□ 1.13
DDR1-250ENST00000503628 KIF3CO14782 793 aa22.13■■□□□ 1.13
DDR1-250ENST00000503628 PIGBQ92521 554 aa22.12■■□□□ 1.13
DDR1-250ENST00000503628 INSRP06213 1382 aa22.12■■□□□ 1.13
DDR1-250ENST00000503628 SSFA2P28290 1259 aa22.09■■□□□ 1.13
DDR1-250ENST00000503628 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.13
DDR1-250ENST00000503628 NSD3Q9BZ95 1437 aa22.08■■□□□ 1.13
DDR1-250ENST00000503628 SLC24A1O60721 1099 aa22.08■■□□□ 1.13
DDR1-250ENST00000503628 LINC00116Q8NCU8 138 aa22.08■■□□□ 1.13
DDR1-250ENST00000503628 TONSLQ96HA7 1378 aa22.08■■□□□ 1.12
DDR1-250ENST00000503628 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.12
DDR1-250ENST00000503628 LOC102724428A0A0B4J2F2 783 aa22.07■■□□□ 1.12
DDR1-250ENST00000503628 SIK1P57059 783 aa22.07■■□□□ 1.12
DDR1-250ENST00000503628 FLT4P35916 1363 aa22.07■■□□□ 1.12
DDR1-250ENST00000503628 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
DDR1-250ENST00000503628 PKD1L3Q7Z443 1732 aa22.05■■□□□ 1.12
DDR1-250ENST00000503628 GNPATO15228 680 aa22.04■■□□□ 1.12
DDR1-250ENST00000503628 APLP1P51693 650 aa22.04■■□□□ 1.12
DDR1-250ENST00000503628 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
DDR1-250ENST00000503628 KIF24Q5T7B8 1368 aa22.03■■□□□ 1.12
DDR1-250ENST00000503628 ITPK1Q13572 414 aa22.03■■□□□ 1.12
DDR1-250ENST00000503628 ASAP1Q9ULH1 1129 aa22.03■■□□□ 1.12
DDR1-250ENST00000503628 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.12
DDR1-250ENST00000503628 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.12
DDR1-250ENST00000503628 MMP10P09238 476 aa22.02■■□□□ 1.12
DDR1-250ENST00000503628 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
DDR1-250ENST00000503628 EMILIN1Q9Y6C2 1016 aa22.02■■□□□ 1.12
DDR1-250ENST00000503628 ATP6V1AP38606 617 aa22.01■■□□□ 1.11
DDR1-250ENST00000503628 DNAJC5GQ8N7S2 189 aa22.01■■□□□ 1.11
DDR1-250ENST00000503628 TMOD3Q9NYL9 352 aa22.01■■□□□ 1.11
DDR1-250ENST00000503628 N4BP2Q86UW6 1770 aaPredicted RBP22.01■■□□□ 1.11
DDR1-250ENST00000503628 TOMM70O94826 608 aa22■■□□□ 1.11
DDR1-250ENST00000503628 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
DDR1-250ENST00000503628 PXDNLA1KZ92 1463 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms