RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 AMPHP49418 695 aa12.54□□□□□ -0.4
NR1I3-218ENST00000503547 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
NR1I3-218ENST00000503547 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
NR1I3-218ENST00000503547 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
NR1I3-218ENST00000503547 KCNQ4P56696 695 aa12.53□□□□□ -0.4
NR1I3-218ENST00000503547 C5P01031 1676 aa12.53□□□□□ -0.4
NR1I3-218ENST00000503547 ANKRD36BQ8N2N9 1353 aa12.53□□□□□ -0.4
NR1I3-218ENST00000503547 HOXC9P31274 260 aa12.52□□□□□ -0.41
NR1I3-218ENST00000503547 SLC16A10Q8TF71 515 aa12.52□□□□□ -0.41
NR1I3-218ENST00000503547 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
NR1I3-218ENST00000503547 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
NR1I3-218ENST00000503547 MAP3K19Q56UN5 1328 aa12.52□□□□□ -0.41
NR1I3-218ENST00000503547 ITGB4P16144 1822 aa12.51□□□□□ -0.41
NR1I3-218ENST00000503547 PUS7Q96PZ0 661 aaKnown RBP12.51□□□□□ -0.41
NR1I3-218ENST00000503547 PNPLA7Q6ZV29 1317 aa12.51□□□□□ -0.41
NR1I3-218ENST00000503547 SMG6Q86US8 1419 aaKnown RBP12.51□□□□□ -0.41
NR1I3-218ENST00000503547 MEGF6O75095 1541 aa12.51□□□□□ -0.41
NR1I3-218ENST00000503547 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
NR1I3-218ENST00000503547 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
NR1I3-218ENST00000503547 FBLN1P23142 703 aa12.5□□□□□ -0.41
NR1I3-218ENST00000503547 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
NR1I3-218ENST00000503547 CCNL1Q9UK58 526 aaPredicted RBP12.5□□□□□ -0.41
NR1I3-218ENST00000503547 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
NR1I3-218ENST00000503547 USP47Q96K76 1375 aa12.49□□□□□ -0.41
NR1I3-218ENST00000503547 NSD2O96028 1365 aa12.48□□□□□ -0.41
NR1I3-218ENST00000503547 RRS1Q15050 365 aaKnown RBP12.48□□□□□ -0.41
NR1I3-218ENST00000503547 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
NR1I3-218ENST00000503547 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
NR1I3-218ENST00000503547 TESK2Q96S53 571 aa12.48□□□□□ -0.41
NR1I3-218ENST00000503547 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
NR1I3-218ENST00000503547 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
NR1I3-218ENST00000503547 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
NR1I3-218ENST00000503547 C1QTNF8P60827 252 aa12.46□□□□□ -0.41
NR1I3-218ENST00000503547 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
NR1I3-218ENST00000503547 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
NR1I3-218ENST00000503547 CGNL1Q0VF96 1302 aa12.45□□□□□ -0.42
NR1I3-218ENST00000503547 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-218ENST00000503547 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-218ENST00000503547 NBPF6Q5VWK0 638 aa12.45□□□□□ -0.42
NR1I3-218ENST00000503547 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
NR1I3-218ENST00000503547 NBPF4Q96M43 638 aa12.45□□□□□ -0.42
NR1I3-218ENST00000503547 PKD1L3Q7Z443 1732 aa12.45□□□□□ -0.42
NR1I3-218ENST00000503547 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
NR1I3-218ENST00000503547 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
NR1I3-218ENST00000503547 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
NR1I3-218ENST00000503547 TMF1P82094 1093 aa12.44□□□□□ -0.42
NR1I3-218ENST00000503547 C4BP0C0L5 1744 aa12.44□□□□□ -0.42
NR1I3-218ENST00000503547 FYB1O15117 783 aa12.43□□□□□ -0.42
NR1I3-218ENST00000503547 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-218ENST00000503547 FLT4P35916 1363 aa12.43□□□□□ -0.42
NR1I3-218ENST00000503547 CEP350Q5VT06 3117 aa12.42□□□□□ -0.42
NR1I3-218ENST00000503547 GRIN3BO60391 1043 aa12.42□□□□□ -0.42
NR1I3-218ENST00000503547 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
NR1I3-218ENST00000503547 PALLDQ8WX93 1383 aa12.42□□□□□ -0.42
NR1I3-218ENST00000503547 YBX3P16989 372 aaKnown RBP eCLIP12.41□□□□□ -0.42
NR1I3-218ENST00000503547 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
NR1I3-218ENST00000503547 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
NR1I3-218ENST00000503547 ANKRD26Q9UPS8 1709 aa12.41□□□□□ -0.42
NR1I3-218ENST00000503547 INSRP06213 1382 aa12.41□□□□□ -0.42
NR1I3-218ENST00000503547 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
NR1I3-218ENST00000503547 AK7Q96M32 723 aa12.4□□□□□ -0.42
NR1I3-218ENST00000503547 CDCA8Q53HL2 280 aa12.39□□□□□ -0.43
NR1I3-218ENST00000503547 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
NR1I3-218ENST00000503547 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
NR1I3-218ENST00000503547 PHF14O94880 888 aa12.38□□□□□ -0.43
NR1I3-218ENST00000503547 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
NR1I3-218ENST00000503547 CYP27B1O15528 508 aa12.37□□□□□ -0.43
NR1I3-218ENST00000503547 SMARCC1Q92922 1105 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-218ENST00000503547 CD2APQ9Y5K6 639 aa12.37□□□□□ -0.43
NR1I3-218ENST00000503547 EMILIN1Q9Y6C2 1016 aa12.37□□□□□ -0.43
NR1I3-218ENST00000503547 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
NR1I3-218ENST00000503547 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
NR1I3-218ENST00000503547 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
NR1I3-218ENST00000503547 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
NR1I3-218ENST00000503547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
NR1I3-218ENST00000503547 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-218ENST00000503547 PIGBQ92521 554 aa12.34□□□□□ -0.43
NR1I3-218ENST00000503547 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-218ENST00000503547 TMOD3Q9NYL9 352 aa12.34□□□□□ -0.43
NR1I3-218ENST00000503547 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
NR1I3-218ENST00000503547 POTEDQ86YR6 584 aa12.33□□□□□ -0.44
NR1I3-218ENST00000503547 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
NR1I3-218ENST00000503547 IGSF1Q8N6C5 1336 aa12.33□□□□□ -0.44
NR1I3-218ENST00000503547 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
NR1I3-218ENST00000503547 LOC102724428A0A0B4J2F2 783 aa12.32□□□□□ -0.44
NR1I3-218ENST00000503547 GNPATO15228 680 aa12.32□□□□□ -0.44
NR1I3-218ENST00000503547 SIK1P57059 783 aa12.32□□□□□ -0.44
NR1I3-218ENST00000503547 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
NR1I3-218ENST00000503547 CARD14Q9BXL6 1004 aa12.32□□□□□ -0.44
NR1I3-218ENST00000503547 NCAPD2Q15021 1401 aa12.31□□□□□ -0.44
NR1I3-218ENST00000503547 SSFA2P28290 1259 aa12.31□□□□□ -0.44
NR1I3-218ENST00000503547 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
NR1I3-218ENST00000503547 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
NR1I3-218ENST00000503547 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-218ENST00000503547 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-218ENST00000503547 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-218ENST00000503547 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
NR1I3-218ENST00000503547 EYA1Q99502 592 aa12.3□□□□□ -0.44
NR1I3-218ENST00000503547 ASAP1Q9ULH1 1129 aa12.3□□□□□ -0.44
NR1I3-218ENST00000503547 WASHC2AQ641Q2 1341 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms