RNA–Protein interactions for RNA: ENST00000503495.5

DDR1-249, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-249ENST00000503495 NBPF4Q96M43 638 aa21.06■□□□□ 0.96
DDR1-249ENST00000503495 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
DDR1-249ENST00000503495 SHANK3Q9BYB0 1731 aa21.05■□□□□ 0.96
DDR1-249ENST00000503495 SYTL4Q96C24 671 aaPredicted RBP21.05■□□□□ 0.96
DDR1-249ENST00000503495 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
DDR1-249ENST00000503495 MEGF6O75095 1541 aa21.04■□□□□ 0.96
DDR1-249ENST00000503495 RRS1Q15050 365 aaKnown RBP21.04■□□□□ 0.96
DDR1-249ENST00000503495 NSD2O96028 1365 aa21.04■□□□□ 0.96
DDR1-249ENST00000503495 DOT1LQ8TEK3 1739 aa21.04■□□□□ 0.96
DDR1-249ENST00000503495 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
DDR1-249ENST00000503495 LY75O60449 1722 aa21.03■□□□□ 0.96
DDR1-249ENST00000503495 COL24A1Q17RW2 1714 aa21.03■□□□□ 0.96
DDR1-249ENST00000503495 USP47Q96K76 1375 aa21.02■□□□□ 0.96
DDR1-249ENST00000503495 CDCA8Q53HL2 280 aa21.02■□□□□ 0.96
DDR1-249ENST00000503495 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
DDR1-249ENST00000503495 UTRNP46939 3433 aa21.01■□□□□ 0.95
DDR1-249ENST00000503495 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
DDR1-249ENST00000503495 INSRP06213 1382 aa21■□□□□ 0.95
DDR1-249ENST00000503495 CHD4Q14839 1912 aa21■□□□□ 0.95
DDR1-249ENST00000503495 KIF24Q5T7B8 1368 aa21■□□□□ 0.95
DDR1-249ENST00000503495 POLD1P28340 1107 aa21■□□□□ 0.95
DDR1-249ENST00000503495 KCNQ4P56696 695 aa21■□□□□ 0.95
DDR1-249ENST00000503495 SMG6Q86US8 1419 aaKnown RBP21■□□□□ 0.95
DDR1-249ENST00000503495 ZNF784Q8NCA9 323 aaPredicted RBP20.99■□□□□ 0.95
DDR1-249ENST00000503495 TATP17735 454 aaPredicted RBP20.98■□□□□ 0.95
DDR1-249ENST00000503495 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
DDR1-249ENST00000503495 HSP90AB2PQ58FF8 381 aa20.98■□□□□ 0.95
DDR1-249ENST00000503495 USHBP1Q8N6Y0 703 aa20.98■□□□□ 0.95
DDR1-249ENST00000503495 CCNL1Q9UK58 526 aaPredicted RBP20.98■□□□□ 0.95
DDR1-249ENST00000503495 TUBGCP6Q96RT7 1819 aa20.97■□□□□ 0.95
DDR1-249ENST00000503495 FLT4P35916 1363 aa20.97■□□□□ 0.95
DDR1-249ENST00000503495 KIF20BQ96Q89 1820 aa20.95■□□□□ 0.94
DDR1-249ENST00000503495 HMGB2P26583 209 aaKnown RBP20.95■□□□□ 0.94
DDR1-249ENST00000503495 CARD14Q9BXL6 1004 aa20.95■□□□□ 0.94
DDR1-249ENST00000503495 GPR162Q16538 588 aa20.94■□□□□ 0.94
DDR1-249ENST00000503495 PCDH11XQ9BZA7 1347 aa20.94■□□□□ 0.94
DDR1-249ENST00000503495 PCDH11YQ9BZA8 1340 aa20.94■□□□□ 0.94
DDR1-249ENST00000503495 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
DDR1-249ENST00000503495 COL23A1Q86Y22 540 aaPredicted RBP20.92■□□□□ 0.94
DDR1-249ENST00000503495 CYP27B1O15528 508 aa20.91■□□□□ 0.94
DDR1-249ENST00000503495 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
DDR1-249ENST00000503495 EMILIN1Q9Y6C2 1016 aa20.89■□□□□ 0.93
DDR1-249ENST00000503495 NSD3Q9BZ95 1437 aa20.88■□□□□ 0.93
DDR1-249ENST00000503495 SENP3-EIF4A1A0A087X0R7 540 aa20.88■□□□□ 0.93
DDR1-249ENST00000503495 MPRIPQ6WCQ1 1025 aa20.88■□□□□ 0.93
DDR1-249ENST00000503495 FLAD1Q8NFF5 587 aa20.88■□□□□ 0.93
DDR1-249ENST00000503495 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
DDR1-249ENST00000503495 MSH5O43196 834 aa20.87■□□□□ 0.93
DDR1-249ENST00000503495 NKX1-1Q15270 411 aaPredicted RBP20.87■□□□□ 0.93
DDR1-249ENST00000503495 NLGN2Q8NFZ4 835 aa20.87■□□□□ 0.93
DDR1-249ENST00000503495 C5P01031 1676 aa20.86■□□□□ 0.93
DDR1-249ENST00000503495 PALLDQ8WX93 1383 aa20.86■□□□□ 0.93
DDR1-249ENST00000503495 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
DDR1-249ENST00000503495 TAF1LQ8IZX4 1826 aa20.86■□□□□ 0.93
DDR1-249ENST00000503495 IFFO2Q5TF58 517 aa20.86■□□□□ 0.93
DDR1-249ENST00000503495 SMARCC1Q92922 1105 aaPredicted RBP20.86■□□□□ 0.93
DDR1-249ENST00000503495 PKD1L3Q7Z443 1732 aa20.86■□□□□ 0.93
DDR1-249ENST00000503495 ITGB4P16144 1822 aa20.85■□□□□ 0.93
DDR1-249ENST00000503495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.84■□□□□ 0.93
DDR1-249ENST00000503495 SPG7Q9UQ90 795 aa20.84■□□□□ 0.93
DDR1-249ENST00000503495 ANKRD26Q9UPS8 1709 aa20.84■□□□□ 0.93
DDR1-249ENST00000503495 MAP2P11137 1827 aaKnown RBP20.83■□□□□ 0.93
DDR1-249ENST00000503495 PPM1GO15355 546 aaPredicted RBP20.83■□□□□ 0.93
DDR1-249ENST00000503495 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
DDR1-249ENST00000503495 TOGARAM1Q9Y4F4 1720 aa20.83■□□□□ 0.92
DDR1-249ENST00000503495 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
DDR1-249ENST00000503495 PIGBQ92521 554 aa20.82■□□□□ 0.92
DDR1-249ENST00000503495 C1QTNF8P60827 252 aa20.81■□□□□ 0.92
DDR1-249ENST00000503495 EYA1Q99502 592 aa20.81■□□□□ 0.92
DDR1-249ENST00000503495 POLKQ9UBT6 870 aa20.81■□□□□ 0.92
DDR1-249ENST00000503495 GOLGB1Q14789 3259 aaKnown RBP20.81■□□□□ 0.92
DDR1-249ENST00000503495 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
DDR1-249ENST00000503495 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
DDR1-249ENST00000503495 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
DDR1-249ENST00000503495 C4BP0C0L5 1744 aa20.8■□□□□ 0.92
DDR1-249ENST00000503495 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
DDR1-249ENST00000503495 AK7Q96M32 723 aa20.78■□□□□ 0.92
DDR1-249ENST00000503495 IFNL2Q8IZJ0 200 aa20.77■□□□□ 0.92
DDR1-249ENST00000503495 UBR3Q6ZT12 1888 aa20.76■□□□□ 0.91
DDR1-249ENST00000503495 LOC102724428A0A0B4J2F2 783 aa20.76■□□□□ 0.91
DDR1-249ENST00000503495 SIK1P57059 783 aa20.76■□□□□ 0.91
DDR1-249ENST00000503495 AMIGO3Q86WK7 504 aa20.76■□□□□ 0.91
DDR1-249ENST00000503495 PLEKHG2Q9H7P9 1386 aa20.75■□□□□ 0.91
DDR1-249ENST00000503495 PHKG2P15735 406 aa20.75■□□□□ 0.91
DDR1-249ENST00000503495 SSFA2P28290 1259 aa20.75■□□□□ 0.91
DDR1-249ENST00000503495 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
DDR1-249ENST00000503495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.74■□□□□ 0.91
DDR1-249ENST00000503495 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
DDR1-249ENST00000503495 ASAP1Q9ULH1 1129 aa20.73■□□□□ 0.91
DDR1-249ENST00000503495 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
DDR1-249ENST00000503495 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
DDR1-249ENST00000503495 PHF14O94880 888 aa20.71■□□□□ 0.91
DDR1-249ENST00000503495 ATG3Q9NT62 314 aa20.71■□□□□ 0.91
DDR1-249ENST00000503495 ATP6V1AP38606 617 aa20.7■□□□□ 0.9
DDR1-249ENST00000503495 SMIM5Q71RC9 77 aa20.7■□□□□ 0.9
DDR1-249ENST00000503495 POLR3GLQ9BT43 218 aa20.7■□□□□ 0.9
DDR1-249ENST00000503495 IGSF1Q8N6C5 1336 aa20.7■□□□□ 0.9
DDR1-249ENST00000503495 TNNT2P45379 298 aaPredicted RBP20.69■□□□□ 0.9
DDR1-249ENST00000503495 ITPK1Q13572 414 aa20.69■□□□□ 0.9
DDR1-249ENST00000503495 ERVV-2B6SEH9 535 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms