RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 IL13P35225 146 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 NUP98P52948 1817 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 UBE2Q2Q8WVN8 375 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 USP35Q9P2H5 1018 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 CHL1O00533 1208 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 ARHGEF25Q86VW2 580 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 EIF5BO60841 1220 aaKnown RBP3.79□□□□□ -1.8
NEDD4-204ENST00000503468 IGHA2P01877 340 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 CBLBQ13191 982 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 FYB1O15117 783 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 FBXO3Q9UK99 471 aa3.79□□□□□ -1.8
NEDD4-204ENST00000503468 GTF2E1P29083 439 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-204ENST00000503468 HOMEZQ8IX15 550 aa3.78□□□□□ -1.8
NEDD4-204ENST00000503468 FAM177A1Q8N128 213 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-204ENST00000503468 FNBP4Q8N3X1 1017 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-204ENST00000503468 SMC5Q8IY18 1101 aa3.78□□□□□ -1.8
NEDD4-204ENST00000503468 VSIG10Q8N0Z9 540 aa3.78□□□□□ -1.8
NEDD4-204ENST00000503468 CASP7P55210 303 aa3.78□□□□□ -1.8
NEDD4-204ENST00000503468 FBLN2P98095 1184 aa3.78□□□□□ -1.8
NEDD4-204ENST00000503468 DUSP27Q5VZP5 1158 aa3.78□□□□□ -1.8
NEDD4-204ENST00000503468 GHRHRQ02643 423 aa3.78□□□□□ -1.81
NEDD4-204ENST00000503468 ALDH8A1Q9H2A2 487 aaPredicted RBP3.78□□□□□ -1.81
NEDD4-204ENST00000503468 SPATA31A3Q5VYP0 1347 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 CDCA8Q53HL2 280 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 TMEM174Q8WUU8 243 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 DEFB129Q9H1M3 183 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 MAF1Q9H063 256 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 MTA3Q9BTC8 594 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 AGXT2Q9BYV1 514 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 PDE3AQ14432 1141 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 C15orf52Q6ZUT6 534 aaKnown RBP3.77□□□□□ -1.81
NEDD4-204ENST00000503468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-204ENST00000503468 C7P10643 843 aa3.77□□□□□ -1.81
NEDD4-204ENST00000503468 NOP58Q9Y2X3 529 aaKnown RBP3.76□□□□□ -1.81
NEDD4-204ENST00000503468 CCDC61Q9Y6R9 512 aa3.76□□□□□ -1.81
NEDD4-204ENST00000503468 ATAD5Q96QE3 1844 aa3.76□□□□□ -1.81
NEDD4-204ENST00000503468 FER1L6Q2WGJ9 1857 aa3.76□□□□□ -1.81
NEDD4-204ENST00000503468 WASLO00401 505 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-204ENST00000503468 ECM1Q16610 540 aa3.76□□□□□ -1.81
NEDD4-204ENST00000503468 RBM19Q9Y4C8 960 aaKnown RBP3.76□□□□□ -1.81
NEDD4-204ENST00000503468 MYH15Q9Y2K3 1946 aa3.76□□□□□ -1.81
NEDD4-204ENST00000503468 RABL6Q3YEC7 729 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-204ENST00000503468 DOCK5Q9H7D0 1870 aa3.76□□□□□ -1.81
NEDD4-204ENST00000503468 ZMYM6O95789 1325 aa3.76□□□□□ -1.81
NEDD4-204ENST00000503468 TSGA10IPQ3SY00 556 aa3.75□□□□□ -1.81
NEDD4-204ENST00000503468 BTAF1O14981 1849 aa3.75□□□□□ -1.81
NEDD4-204ENST00000503468 MIER1Q8N108 512 aa3.75□□□□□ -1.81
NEDD4-204ENST00000503468 MYH7P12883 1935 aa3.75□□□□□ -1.81
NEDD4-204ENST00000503468 HNRNPMP52272 730 aaKnown RBP eCLIP3.75□□□□□ -1.81
NEDD4-204ENST00000503468 AOX1Q06278 1338 aa3.75□□□□□ -1.81
NEDD4-204ENST00000503468 ALDH1L2Q3SY69 923 aa3.75□□□□□ -1.81
NEDD4-204ENST00000503468 ZNF512BQ96KM6 892 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-204ENST00000503468 PPM1GO15355 546 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-204ENST00000503468 EIF4G2P78344 907 aaKnown RBP eCLIP3.74□□□□□ -1.81
NEDD4-204ENST00000503468 NBPF1Q3BBV0 1214 aa3.74□□□□□ -1.81
NEDD4-204ENST00000503468 PLA2G12BQ9BX93 195 aa3.74□□□□□ -1.81
NEDD4-204ENST00000503468 TRIM35Q9UPQ4 493 aa3.74□□□□□ -1.81
NEDD4-204ENST00000503468 FCHSD2O94868 740 aa3.74□□□□□ -1.81
NEDD4-204ENST00000503468 HDAC1Q13547 482 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-204ENST00000503468 RSPH6AQ9H0K4 717 aa3.74□□□□□ -1.81
NEDD4-204ENST00000503468 SSFA2P28290 1259 aa3.74□□□□□ -1.81
NEDD4-204ENST00000503468 FOXD1Q16676 465 aa3.74□□□□□ -1.81
NEDD4-204ENST00000503468 INTS3Q68E01 1043 aaKnown RBP3.74□□□□□ -1.81
NEDD4-204ENST00000503468 ANP32AP39687 249 aaKnown RBP3.73□□□□□ -1.81
NEDD4-204ENST00000503468 POLKQ9UBT6 870 aa3.73□□□□□ -1.81
NEDD4-204ENST00000503468 NPM3O75607 178 aaKnown RBP3.73□□□□□ -1.81
NEDD4-204ENST00000503468 SLFN5Q08AF3 891 aa3.73□□□□□ -1.81
NEDD4-204ENST00000503468 BARGINQ6ZT62 677 aa3.73□□□□□ -1.81
NEDD4-204ENST00000503468 UNCXA6NJT0 531 aa3.73□□□□□ -1.81
NEDD4-204ENST00000503468 MAP3K15Q6ZN16 1313 aa3.73□□□□□ -1.81
NEDD4-204ENST00000503468 PAPLNO95428 1278 aa3.73□□□□□ -1.81
NEDD4-204ENST00000503468 DEKP35659 375 aaKnown RBP3.73□□□□□ -1.81
NEDD4-204ENST00000503468 STAP2Q9UGK3 403 aa3.73□□□□□ -1.81
NEDD4-204ENST00000503468 PALLDQ8WX93 1383 aa3.72□□□□□ -1.81
NEDD4-204ENST00000503468 DCAF8L2P0C7V8 631 aa3.72□□□□□ -1.81
NEDD4-204ENST00000503468 THEMISQ8N1K5 641 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-204ENST00000503468 HSPA5P11021 654 aaKnown RBP3.72□□□□□ -1.81
NEDD4-204ENST00000503468 NCLP19338 710 aaKnown RBP3.72□□□□□ -1.81
NEDD4-204ENST00000503468 METTL16Q86W50 562 aaKnown RBP3.72□□□□□ -1.81
NEDD4-204ENST00000503468 CYP2E1P05181 493 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-204ENST00000503468 BCANQ96GW7 911 aa3.71□□□□□ -1.82
NEDD4-204ENST00000503468 PHIPQ8WWQ0 1821 aa3.71□□□□□ -1.82
NEDD4-204ENST00000503468 FGRP09769 529 aa3.71□□□□□ -1.82
NEDD4-204ENST00000503468 MS4A1P11836 297 aa3.71□□□□□ -1.82
NEDD4-204ENST00000503468 FAM43BQ6ZT52 329 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-204ENST00000503468 WAPLQ7Z5K2 1190 aa3.71□□□□□ -1.82
NEDD4-204ENST00000503468 ATG3Q9NT62 314 aa3.71□□□□□ -1.82
NEDD4-204ENST00000503468 UBTFP17480 764 aaKnown RBP3.71□□□□□ -1.82
NEDD4-204ENST00000503468 FOXR2Q6PJQ5 311 aa3.7□□□□□ -1.82
NEDD4-204ENST00000503468 PPP2R1AP30153 589 aa3.7□□□□□ -1.82
NEDD4-204ENST00000503468 POLA2Q14181 598 aa3.7□□□□□ -1.82
NEDD4-204ENST00000503468 PPP4R2Q9NY27 417 aa3.7□□□□□ -1.82
NEDD4-204ENST00000503468 FKBP8Q14318 412 aa3.7□□□□□ -1.82
NEDD4-204ENST00000503468 SIP14410 1827 aa3.7□□□□□ -1.82
NEDD4-204ENST00000503468 ST20-MTHFSA0A0A6YYL1 179 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 EHMT2Q96KQ7 1210 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 FAM237AA0A1B0GTK4 181 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 USPL1Q5W0Q7 1092 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 C19orf44Q9H6X5 657 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 ZBTB47Q9UFB7 747 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms