RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 AMPHP49418 695 aa18.4■□□□□ 0.54
TRIO-205ENST00000503399 MSH5O43196 834 aa18.39■□□□□ 0.53
TRIO-205ENST00000503399 HOXC9P31274 260 aa18.39■□□□□ 0.53
TRIO-205ENST00000503399 MAP3K19Q56UN5 1328 aa18.39■□□□□ 0.53
TRIO-205ENST00000503399 RGPD2P0DJD1 1756 aa18.38■□□□□ 0.53
TRIO-205ENST00000503399 FBLN1P23142 703 aa18.38■□□□□ 0.53
TRIO-205ENST00000503399 NLGN2Q8NFZ4 835 aa18.38■□□□□ 0.53
TRIO-205ENST00000503399 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
TRIO-205ENST00000503399 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
TRIO-205ENST00000503399 LY75O60449 1722 aa18.37■□□□□ 0.53
TRIO-205ENST00000503399 GIGYF1O75420 1035 aaPredicted RBP18.37■□□□□ 0.53
TRIO-205ENST00000503399 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
TRIO-205ENST00000503399 NSD2O96028 1365 aa18.37■□□□□ 0.53
TRIO-205ENST00000503399 MEGF6O75095 1541 aa18.37■□□□□ 0.53
TRIO-205ENST00000503399 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
TRIO-205ENST00000503399 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
TRIO-205ENST00000503399 GOLGB1Q14789 3259 aaKnown RBP18.35■□□□□ 0.53
TRIO-205ENST00000503399 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
TRIO-205ENST00000503399 USP47Q96K76 1375 aa18.34■□□□□ 0.53
TRIO-205ENST00000503399 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
TRIO-205ENST00000503399 RRS1Q15050 365 aaKnown RBP18.33■□□□□ 0.52
TRIO-205ENST00000503399 MSL1Q68DK7 614 aa18.33■□□□□ 0.52
TRIO-205ENST00000503399 RTL1A6NKG5 1358 aa18.31■□□□□ 0.52
TRIO-205ENST00000503399 ST20-MTHFSA0A0A6YYL1 179 aa18.31■□□□□ 0.52
TRIO-205ENST00000503399 YBX3P16989 372 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIO-205ENST00000503399 NBPF6Q5VWK0 638 aa18.31■□□□□ 0.52
TRIO-205ENST00000503399 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
TRIO-205ENST00000503399 RAPGEF4Q8WZA2 1011 aa18.31■□□□□ 0.52
TRIO-205ENST00000503399 NBPF4Q96M43 638 aa18.31■□□□□ 0.52
TRIO-205ENST00000503399 TESK2Q96S53 571 aa18.31■□□□□ 0.52
TRIO-205ENST00000503399 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
TRIO-205ENST00000503399 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
TRIO-205ENST00000503399 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
TRIO-205ENST00000503399 C5P01031 1676 aa18.28■□□□□ 0.52
TRIO-205ENST00000503399 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
TRIO-205ENST00000503399 CGNL1Q0VF96 1302 aa18.27■□□□□ 0.52
TRIO-205ENST00000503399 PALLDQ8WX93 1383 aa18.26■□□□□ 0.51
TRIO-205ENST00000503399 PCDH11XQ9BZA7 1347 aa18.25■□□□□ 0.51
TRIO-205ENST00000503399 PCDH11YQ9BZA8 1340 aa18.25■□□□□ 0.51
TRIO-205ENST00000503399 FYB1O15117 783 aa18.24■□□□□ 0.51
TRIO-205ENST00000503399 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
TRIO-205ENST00000503399 MPRIPQ6WCQ1 1025 aa18.24■□□□□ 0.51
TRIO-205ENST00000503399 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
TRIO-205ENST00000503399 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
TRIO-205ENST00000503399 TAF1LQ8IZX4 1826 aa18.22■□□□□ 0.51
TRIO-205ENST00000503399 KIF20BQ96Q89 1820 aa18.22■□□□□ 0.51
TRIO-205ENST00000503399 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
TRIO-205ENST00000503399 AK7Q96M32 723 aa18.22■□□□□ 0.51
TRIO-205ENST00000503399 INSRP06213 1382 aa18.21■□□□□ 0.51
TRIO-205ENST00000503399 FLT4P35916 1363 aa18.21■□□□□ 0.51
TRIO-205ENST00000503399 TMF1P82094 1093 aa18.21■□□□□ 0.51
TRIO-205ENST00000503399 CD2APQ9Y5K6 639 aa18.21■□□□□ 0.51
TRIO-205ENST00000503399 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
TRIO-205ENST00000503399 PHF14O94880 888 aa18.2■□□□□ 0.5
TRIO-205ENST00000503399 HMGB2P26583 209 aaKnown RBP18.2■□□□□ 0.5
TRIO-205ENST00000503399 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
TRIO-205ENST00000503399 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
TRIO-205ENST00000503399 CYP27B1O15528 508 aa18.19■□□□□ 0.5
TRIO-205ENST00000503399 ZNF526Q8TF50 670 aaPredicted RBP18.19■□□□□ 0.5
TRIO-205ENST00000503399 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
TRIO-205ENST00000503399 SMARCC1Q92922 1105 aaPredicted RBP18.18■□□□□ 0.5
TRIO-205ENST00000503399 ITGB4P16144 1822 aa18.18■□□□□ 0.5
TRIO-205ENST00000503399 CEP350Q5VT06 3117 aa18.18■□□□□ 0.5
TRIO-205ENST00000503399 SMIM5Q71RC9 77 aa18.17■□□□□ 0.5
TRIO-205ENST00000503399 AMIGO3Q86WK7 504 aa18.17■□□□□ 0.5
TRIO-205ENST00000503399 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
TRIO-205ENST00000503399 EMILIN1Q9Y6C2 1016 aa18.16■□□□□ 0.5
TRIO-205ENST00000503399 IGSF1Q8N6C5 1336 aa18.16■□□□□ 0.5
TRIO-205ENST00000503399 KIF24Q5T7B8 1368 aa18.16■□□□□ 0.5
TRIO-205ENST00000503399 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
TRIO-205ENST00000503399 PKD1L3Q7Z443 1732 aa18.15■□□□□ 0.5
TRIO-205ENST00000503399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.15■□□□□ 0.5
TRIO-205ENST00000503399 PIGBQ92521 554 aa18.15■□□□□ 0.5
TRIO-205ENST00000503399 UBR3Q6ZT12 1888 aa18.15■□□□□ 0.5
TRIO-205ENST00000503399 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
TRIO-205ENST00000503399 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
TRIO-205ENST00000503399 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
TRIO-205ENST00000503399 ADCY9O60503 1353 aa18.13■□□□□ 0.49
TRIO-205ENST00000503399 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
TRIO-205ENST00000503399 LOC102724428A0A0B4J2F2 783 aa18.11■□□□□ 0.49
TRIO-205ENST00000503399 SSFA2P28290 1259 aa18.11■□□□□ 0.49
TRIO-205ENST00000503399 SIK1P57059 783 aa18.11■□□□□ 0.49
TRIO-205ENST00000503399 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
TRIO-205ENST00000503399 GNPATO15228 680 aa18.1■□□□□ 0.49
TRIO-205ENST00000503399 CARD14Q9BXL6 1004 aa18.09■□□□□ 0.49
TRIO-205ENST00000503399 MAP2P11137 1827 aaKnown RBP18.09■□□□□ 0.49
TRIO-205ENST00000503399 NCAPD2Q15021 1401 aa18.08■□□□□ 0.49
TRIO-205ENST00000503399 HSPA6P17066 643 aa18.08■□□□□ 0.48
TRIO-205ENST00000503399 ATP6V1AP38606 617 aa18.08■□□□□ 0.48
TRIO-205ENST00000503399 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.48
TRIO-205ENST00000503399 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.48
TRIO-205ENST00000503399 ITPK1Q13572 414 aa18.07■□□□□ 0.48
TRIO-205ENST00000503399 EYA1Q99502 592 aa18.07■□□□□ 0.48
TRIO-205ENST00000503399 ANKRD26Q9UPS8 1709 aa18.06■□□□□ 0.48
TRIO-205ENST00000503399 WASHC2AQ641Q2 1341 aa18.05■□□□□ 0.48
TRIO-205ENST00000503399 MMP10P09238 476 aa18.05■□□□□ 0.48
TRIO-205ENST00000503399 IFNL2Q8IZJ0 200 aa18.05■□□□□ 0.48
TRIO-205ENST00000503399 PHKG2P15735 406 aa18.04■□□□□ 0.48
TRIO-205ENST00000503399 ATG3Q9NT62 314 aa18.03■□□□□ 0.48
TRIO-205ENST00000503399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms