RNA–Protein interactions for RNA: ENST00000503236.1

EXOSC9-204, Transcript of exosome component 9, humanhuman

TSL 3

Gene EXOSC9, Length 644 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-204ENST00000503236 USP17L2Q6R6M4 530 aa8.25□□□□□ -1.09
EXOSC9-204ENST00000503236 SH3BP5LQ7L8J4 393 aa8.25□□□□□ -1.09
EXOSC9-204ENST00000503236 USP17L1Q7RTZ2 530 aa8.25□□□□□ -1.09
EXOSC9-204ENST00000503236 CDV3Q9UKY7 258 aaKnown RBP8.25□□□□□ -1.09
EXOSC9-204ENST00000503236 MAGEB6P1A0A0J9YX57 407 aa8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 BRD1O95696 1058 aa8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 GSK3AP49840 483 aa8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 LARP1Q6PKG0 1096 aaKnown RBP8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 BAP1Q92560 729 aa8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 CCDC9Q9Y3X0 531 aaKnown RBP8.24□□□□□ -1.09
EXOSC9-204ENST00000503236 TIMP2P16035 220 aa8.23□□□□□ -1.09
EXOSC9-204ENST00000503236 ELOAQ14241 798 aaKnown RBP8.23□□□□□ -1.09
EXOSC9-204ENST00000503236 EML3Q32P44 896 aa8.23□□□□□ -1.09
EXOSC9-204ENST00000503236 TRIM50Q86XT4 487 aa8.23□□□□□ -1.09
EXOSC9-204ENST00000503236 ZNF511Q8NB15 262 aa8.23□□□□□ -1.09
EXOSC9-204ENST00000503236 SLC10A4Q96EP9 437 aa8.23□□□□□ -1.09
EXOSC9-204ENST00000503236 CARD14Q9BXL6 1004 aa8.23□□□□□ -1.09
EXOSC9-204ENST00000503236 PIK3CDO00329 1044 aa8.22□□□□□ -1.09
EXOSC9-204ENST00000503236 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
EXOSC9-204ENST00000503236 CDCA8Q53HL2 280 aa8.22□□□□□ -1.09
EXOSC9-204ENST00000503236 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
EXOSC9-204ENST00000503236 SIRT1Q96EB6 747 aa8.22□□□□□ -1.09
EXOSC9-204ENST00000503236 ADH1CP00326 375 aa8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 ATP1A2P50993 1020 aa8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 KCNA1Q09470 495 aa8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 KANK4Q5T7N3 995 aaPredicted RBP8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 SH3RF1Q7Z6J0 888 aa8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 MPNDQ8N594 471 aa8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 MKRN1Q9UHC7 482 aaKnown RBP8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 RBM19Q9Y4C8 960 aaKnown RBP8.21□□□□□ -1.1
EXOSC9-204ENST00000503236 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
EXOSC9-204ENST00000503236 VARSP26640 1264 aaKnown RBP8.2□□□□□ -1.1
EXOSC9-204ENST00000503236 OCSTAMPQ9BR26 566 aa8.2□□□□□ -1.1
EXOSC9-204ENST00000503236 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
EXOSC9-204ENST00000503236 RASA1P20936 1047 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 NCOA4Q13772 614 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 ERFEQ4G0M1 354 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 PHTF2Q8N3S3 785 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 FAM174AQ8TBP5 190 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 NOD1Q9Y239 953 aa8.19□□□□□ -1.1
EXOSC9-204ENST00000503236 MAN1A2O60476 641 aa8.18□□□□□ -1.1
EXOSC9-204ENST00000503236 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
EXOSC9-204ENST00000503236 TMEM151AQ8N4L1 468 aa8.18□□□□□ -1.1
EXOSC9-204ENST00000503236 ESF1Q9H501 851 aaKnown RBP8.18□□□□□ -1.1
EXOSC9-204ENST00000503236 CHIC2Q9UKJ5 165 aa8.18□□□□□ -1.1
EXOSC9-204ENST00000503236 NOVA2Q9UNW9 492 aaKnown RBP8.18□□□□□ -1.1
EXOSC9-204ENST00000503236 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
EXOSC9-204ENST00000503236 TRMT44Q8IYL2 757 aaKnown RBP8.17□□□□□ -1.1
EXOSC9-204ENST00000503236 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
EXOSC9-204ENST00000503236 FOXJ1Q92949 421 aa8.17□□□□□ -1.1
EXOSC9-204ENST00000503236 RASSF7Q02833 373 aa8.16□□□□□ -1.1
EXOSC9-204ENST00000503236 USP4Q13107 963 aa8.16□□□□□ -1.1
EXOSC9-204ENST00000503236 C6orf118Q5T5N4 469 aa8.16□□□□□ -1.1
EXOSC9-204ENST00000503236 CDCA7Q9BWT1 371 aaPredicted RBP8.16□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L15C9J2P7 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L10C9JJH3 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L13C9JLJ4 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L12C9JPN9 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L11C9JVI0 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L21D6R901 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L18D6R9N7 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L22D6RA61 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L17D6RBQ6 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L19D6RCP7 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L20D6RJB6 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 GIGYF1O75420 1035 aaPredicted RBP8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 GDF11O95390 407 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 USP17L24Q0WX57 530 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 LARGE2Q8N3Y3 721 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 C1QTNF2Q9BXJ5 285 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
EXOSC9-204ENST00000503236 ZIC2O95409 532 aaPredicted RBP8.14□□□□□ -1.11
EXOSC9-204ENST00000503236 OGFOD1Q8N543 542 aa8.14□□□□□ -1.11
EXOSC9-204ENST00000503236 ITPKCQ96DU7 683 aa8.14□□□□□ -1.11
EXOSC9-204ENST00000503236 DNAAF2Q9NVR5 837 aaKnown RBP8.14□□□□□ -1.11
EXOSC9-204ENST00000503236 TMEM88BA6NKF7 163 aa8.13□□□□□ -1.11
EXOSC9-204ENST00000503236 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
EXOSC9-204ENST00000503236 PTK7Q13308 1070 aa8.13□□□□□ -1.11
EXOSC9-204ENST00000503236 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
EXOSC9-204ENST00000503236 TMCO4Q5TGY1 634 aa8.13□□□□□ -1.11
EXOSC9-204ENST00000503236 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
EXOSC9-204ENST00000503236 ESPNB1AK53 854 aa8.12□□□□□ -1.11
EXOSC9-204ENST00000503236 ARID5BQ14865 1188 aa8.12□□□□□ -1.11
EXOSC9-204ENST00000503236 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
EXOSC9-204ENST00000503236 CDK15Q96Q40 435 aa8.12□□□□□ -1.11
EXOSC9-204ENST00000503236 GZF1Q9H116 711 aaPredicted RBP8.12□□□□□ -1.11
EXOSC9-204ENST00000503236 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
EXOSC9-204ENST00000503236 PCDHB11Q9Y5F2 797 aa8.12□□□□□ -1.11
EXOSC9-204ENST00000503236 KRT76Q01546 638 aa8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 PSME1Q06323 249 aa8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 SWI5Q1ZZU3 235 aa8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 TMEM164Q5U3C3 297 aa8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 VASH1Q7L8A9 365 aaPredicted RBP8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 CCER1Q8TC90 406 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms