RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NBPF6Q5VWK0 638 aa28.25■■■□□ 2.11
PTPN13-205ENST00000502971 PANK1Q8TE04 598 aa28.25■■■□□ 2.11
PTPN13-205ENST00000502971 NBPF4Q96M43 638 aa28.25■■■□□ 2.11
PTPN13-205ENST00000502971 CRB1P82279 1406 aa28.25■■■□□ 2.11
PTPN13-205ENST00000502971 KIF16BQ96L93 1317 aa28.24■■■□□ 2.11
PTPN13-205ENST00000502971 CRYBG1Q9Y4K1 1723 aa28.23■■■□□ 2.11
PTPN13-205ENST00000502971 LRRC59Q96AG4 307 aaKnown RBP28.22■■■□□ 2.11
PTPN13-205ENST00000502971 COG6Q9Y2V7 657 aa28.22■■■□□ 2.11
PTPN13-205ENST00000502971 NCAPD2Q15021 1401 aa28.22■■■□□ 2.11
PTPN13-205ENST00000502971 PLEKHG5O94827 1062 aa28.21■■■□□ 2.11
PTPN13-205ENST00000502971 PIP4K2BP78356 416 aa28.21■■■□□ 2.11
PTPN13-205ENST00000502971 ANKRD24Q8TF21 1146 aa28.21■■■□□ 2.11
PTPN13-205ENST00000502971 GNAT3A8MTJ3 354 aa28.21■■■□□ 2.11
PTPN13-205ENST00000502971 IPO8O15397 1037 aaKnown RBP28.21■■■□□ 2.11
PTPN13-205ENST00000502971 USHBP1Q8N6Y0 703 aa28.21■■■□□ 2.11
PTPN13-205ENST00000502971 TWISTNBQ3B726 338 aaPredicted RBP28.2■■■□□ 2.1
PTPN13-205ENST00000502971 DZIP1LQ8IYY4 767 aaKnown RBP28.2■■■□□ 2.1
PTPN13-205ENST00000502971 HAP1P54257 671 aaPredicted RBP28.19■■■□□ 2.1
PTPN13-205ENST00000502971 TSPYL6Q8N831 410 aa28.19■■■□□ 2.1
PTPN13-205ENST00000502971 MAP3K5Q99683 1374 aa28.19■■■□□ 2.1
PTPN13-205ENST00000502971 ATF7IPQ6VMQ6 1270 aa28.18■■■□□ 2.1
PTPN13-205ENST00000502971 NOB1Q9ULX3 412 aaKnown RBP28.18■■■□□ 2.1
PTPN13-205ENST00000502971 ABCC6O95255 1503 aa28.18■■■□□ 2.1
PTPN13-205ENST00000502971 CAMTA1Q9Y6Y1 1673 aa28.18■■■□□ 2.1
PTPN13-205ENST00000502971 KIAA0232Q92628 1395 aa28.18■■■□□ 2.1
PTPN13-205ENST00000502971 RLBP1P12271 317 aa28.18■■■□□ 2.1
PTPN13-205ENST00000502971 ZC3H6P61129 1189 aaKnown RBP28.18■■■□□ 2.1
PTPN13-205ENST00000502971 CENPQQ7L2Z9 268 aaPredicted RBP28.17■■■□□ 2.1
PTPN13-205ENST00000502971 FTSJ3Q8IY81 847 aaKnown RBP28.17■■■□□ 2.1
PTPN13-205ENST00000502971 C8orf58Q8NAV2 365 aa28.17■■■□□ 2.1
PTPN13-205ENST00000502971 AXIN2Q9Y2T1 843 aa28.17■■■□□ 2.1
PTPN13-205ENST00000502971 KDM2BQ8NHM5 1336 aa28.17■■■□□ 2.1
PTPN13-205ENST00000502971 LRRC37A3O60309 1634 aa28.16■■■□□ 2.1
PTPN13-205ENST00000502971 CLUAP1Q96AJ1 413 aa28.16■■■□□ 2.1
PTPN13-205ENST00000502971 TNNQ9UQP3 1299 aa28.16■■■□□ 2.1
PTPN13-205ENST00000502971 RGPD2P0DJD1 1756 aa28.16■■■□□ 2.1
PTPN13-205ENST00000502971 TRIM27P14373 513 aa28.15■■■□□ 2.1
PTPN13-205ENST00000502971 MVPQ14764 893 aaKnown RBP28.15■■■□□ 2.1
PTPN13-205ENST00000502971 MRPL50Q8N5N7 158 aaKnown RBP28.15■■■□□ 2.1
PTPN13-205ENST00000502971 FBXO41Q8TF61 875 aa28.15■■■□□ 2.1
PTPN13-205ENST00000502971 ARHGAP45Q92619 1136 aa28.13■■■□□ 2.09
PTPN13-205ENST00000502971 ERBB3P21860 1342 aa28.13■■■□□ 2.09
PTPN13-205ENST00000502971 AMOTQ4VCS5 1084 aa28.12■■■□□ 2.09
PTPN13-205ENST00000502971 BABAM1Q9NWV8 329 aa28.12■■■□□ 2.09
PTPN13-205ENST00000502971 CPDO75976 1380 aa28.12■■■□□ 2.09
PTPN13-205ENST00000502971 PHLPP1O60346 1717 aa28.12■■■□□ 2.09
PTPN13-205ENST00000502971 ELL2O00472 640 aaPredicted RBP28.12■■■□□ 2.09
PTPN13-205ENST00000502971 PLEKHO1Q53GL0 409 aaPredicted RBP28.12■■■□□ 2.09
PTPN13-205ENST00000502971 COL18A1P39060 1754 aa28.11■■■□□ 2.09
PTPN13-205ENST00000502971 ILDR1Q86SU0 546 aaPredicted RBP28.11■■■□□ 2.09
PTPN13-205ENST00000502971 TSPYL4Q9UJ04 414 aa28.11■■■□□ 2.09
PTPN13-205ENST00000502971 RGPD5Q99666 1765 aa28.1■■■□□ 2.09
PTPN13-205ENST00000502971 CABLES1Q8TDN4 633 aa28.1■■■□□ 2.09
PTPN13-205ENST00000502971 COL16A1Q07092 1604 aaPredicted RBP28.1■■■□□ 2.09
PTPN13-205ENST00000502971 LMO7Q8WWI1 1683 aa28.1■■■□□ 2.09
PTPN13-205ENST00000502971 FAM208AQ9UK61 1670 aaKnown RBP28.1■■■□□ 2.09
PTPN13-205ENST00000502971 IL17REQ8NFR9 667 aa28.09■■■□□ 2.09
PTPN13-205ENST00000502971 DDX19BQ9UMR2 479 aa28.07■■■□□ 2.08
PTPN13-205ENST00000502971 AKAP4Q5JQC9 854 aa28.06■■■□□ 2.08
PTPN13-205ENST00000502971 ABCA3Q99758 1704 aa28.06■■■□□ 2.08
PTPN13-205ENST00000502971 CEMIPQ8WUJ3 1361 aa28.05■■■□□ 2.08
PTPN13-205ENST00000502971 TAF7Q15545 349 aaPredicted RBP28.05■■■□□ 2.08
PTPN13-205ENST00000502971 COL22A1Q8NFW1 1626 aaPredicted RBP28.05■■■□□ 2.08
PTPN13-205ENST00000502971 MIS18AQ9NYP9 233 aa28.04■■■□□ 2.08
PTPN13-205ENST00000502971 TCERG1O14776 1098 aaKnown RBP28.04■■■□□ 2.08
PTPN13-205ENST00000502971 ZNF530Q6P9A1 599 aaPredicted RBP28.03■■■□□ 2.08
PTPN13-205ENST00000502971 ITPRIPQ8IWB1 547 aa28.03■■■□□ 2.08
PTPN13-205ENST00000502971 SOS1Q07889 1333 aaPredicted RBP28.02■■■□□ 2.08
PTPN13-205ENST00000502971 KRT24Q2M2I5 525 aa28.02■■■□□ 2.08
PTPN13-205ENST00000502971 TMEM57Q8N5G2 664 aa28.02■■■□□ 2.08
PTPN13-205ENST00000502971 PLEKHG2Q9H7P9 1386 aa28.02■■■□□ 2.08
PTPN13-205ENST00000502971 API5Q9BZZ5 524 aaKnown RBP28.01■■■□□ 2.07
PTPN13-205ENST00000502971 CHRNA2Q15822 529 aa28■■■□□ 2.07
PTPN13-205ENST00000502971 C1orf141Q5JVX7 400 aa28■■■□□ 2.07
PTPN13-205ENST00000502971 NLRP2Q9NX02 1062 aa28■■■□□ 2.07
PTPN13-205ENST00000502971 OVOS2A0A0G2JMS6 1433 aa27.99■■■□□ 2.07
PTPN13-205ENST00000502971 IGHDP01880 384 aa27.98■■■□□ 2.07
PTPN13-205ENST00000502971 CSB-PGBD3P0DP91 1061 aa27.98■■■□□ 2.07
PTPN13-205ENST00000502971 CHMP4BQ9H444 224 aaKnown RBP27.98■■■□□ 2.07
PTPN13-205ENST00000502971 RBM19Q9Y4C8 960 aaKnown RBP27.98■■■□□ 2.07
PTPN13-205ENST00000502971 RAPGEF4Q8WZA2 1011 aa27.98■■■□□ 2.07
PTPN13-205ENST00000502971 PCDHB15Q9Y5E8 787 aa27.98■■■□□ 2.07
PTPN13-205ENST00000502971 ABCC4O15439 1325 aa27.97■■■□□ 2.07
PTPN13-205ENST00000502971 JCADQ9P266 1359 aa27.96■■■□□ 2.07
PTPN13-205ENST00000502971 LGR6Q9HBX8 967 aa27.95■■■□□ 2.07
PTPN13-205ENST00000502971 TATP17735 454 aaPredicted RBP27.95■■■□□ 2.06
PTPN13-205ENST00000502971 RWDD1Q9H446 243 aaPredicted RBP27.95■■■□□ 2.06
PTPN13-205ENST00000502971 PRDM11Q9NQV5 511 aa27.95■■■□□ 2.06
PTPN13-205ENST00000502971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.95■■■□□ 2.06
PTPN13-205ENST00000502971 PTPRCP08575 1304 aa27.94■■■□□ 2.06
PTPN13-205ENST00000502971 RNMTO43148 476 aaKnown RBP27.93■■■□□ 2.06
PTPN13-205ENST00000502971 ZBTB40Q9NUA8 1239 aa27.93■■■□□ 2.06
PTPN13-205ENST00000502971 TEFQ10587 303 aa27.92■■■□□ 2.06
PTPN13-205ENST00000502971 MPRIPQ6WCQ1 1025 aa27.91■■■□□ 2.06
PTPN13-205ENST00000502971 SPG7Q9UQ90 795 aa27.91■■■□□ 2.06
PTPN13-205ENST00000502971 VIRMAQ69YN4 1812 aaKnown RBP27.9■■■□□ 2.06
PTPN13-205ENST00000502971 ADAMTS7Q9UKP4 1686 aa27.89■■■□□ 2.06
PTPN13-205ENST00000502971 KDM3BQ7LBC6 1761 aa27.89■■■□□ 2.06
PTPN13-205ENST00000502971 SLC4A2P04920 1241 aa27.89■■■□□ 2.05
PTPN13-205ENST00000502971 CCDC30Q5VVM6 783 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms