RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CXXC1Q9P0U4 656 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P3-201ENST00000502802 ERCC3P19447 782 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 SCNN1AP37088 669 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 OCLNQ16625 522 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 TAS1R3Q7RTX0 852 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 PRIMPOLQ96LW4 560 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
HMGB1P3-201ENST00000502802 DNAJC14Q6Y2X3 702 aaPredicted RBP8.82□□□□□ -1
HMGB1P3-201ENST00000502802 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
HMGB1P3-201ENST00000502802 HINFPQ9BQA5 517 aa8.82□□□□□ -1
HMGB1P3-201ENST00000502802 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
HMGB1P3-201ENST00000502802 BIN2Q9UBW5 565 aaPredicted RBP8.81□□□□□ -1
HMGB1P3-201ENST00000502802 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
HMGB1P3-201ENST00000502802 M0R2N6 131 aa8.8□□□□□ -1
HMGB1P3-201ENST00000502802 PPEF1O14829 653 aaPredicted RBP8.8□□□□□ -1
HMGB1P3-201ENST00000502802 VARSP26640 1264 aaKnown RBP8.8□□□□□ -1
HMGB1P3-201ENST00000502802 RAB15P59190 212 aa8.8□□□□□ -1
HMGB1P3-201ENST00000502802 RBM47A0AV96 593 aaKnown RBP8.79□□□□□ -1
HMGB1P3-201ENST00000502802 ABL1P00519 1130 aa8.79□□□□□ -1
HMGB1P3-201ENST00000502802 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
HMGB1P3-201ENST00000502802 VASH1Q7L8A9 365 aaPredicted RBP8.78□□□□□ -1
HMGB1P3-201ENST00000502802 MAP4K5Q9Y4K4 846 aa8.78□□□□□ -1
HMGB1P3-201ENST00000502802 LGR5O75473 907 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 WEE1P30291 646 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 WNT7BP56706 349 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 TRIM32Q13049 653 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 INTS6LQ5JSJ4 861 aaKnown RBP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 TSEN2Q8NCE0 465 aaKnown RBP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 ERVH48-1M5A8F1 160 aa8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 ICMTO60725 284 aa8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 SKOR1P84550 965 aa8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 NOM1Q5C9Z4 860 aaKnown RBP8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 UNCXA6NJT0 531 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 RNF223E7ERA6 249 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 H3BRB1 525 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 SCTRP47872 440 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 KCNC4Q03721 635 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ZNF211Q13398 564 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ANKLE1Q8NAG6 615 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 TRIM52Q96A61 297 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 TUT1Q9H6E5 874 aaKnown RBP8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ANO2Q9NQ90 1003 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 GGCXP38435 758 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 ERVK-9P63128 1117 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 CC2D2BQ6DHV5 1058 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 GLYCTKQ8IVS8 523 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 GTF3C2Q8WUA4 911 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 MKNK1Q9BUB5 465 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 SEPT3Q9UH03 358 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 TMEM229AB2RXF0 380 aa8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 C21orf2O43822 256 aa8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 FKBP5Q13451 457 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 PLA2G2CQ5R387 149 aa8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 ANKRD33BA6NCL7 494 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 IGFBP4P22692 258 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 RPIAP49247 311 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 FKBP4Q02790 459 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 BCL2L13Q9BXK5 485 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 DNMT3AQ9Y6K1 912 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 BACH1O14867 736 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 FOXO3O43524 673 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 ARID5BQ14865 1188 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 PURBQ96QR8 312 aaKnown RBP8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 WASLO00401 505 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 ZNF16P17020 682 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 SCNN1DP51172 638 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 GDF10P55107 478 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 CAPN12Q6ZSI9 719 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 MAPK1P28482 360 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 ECM1Q16610 540 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 TNS4Q8IZW8 715 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 MPNDQ8N594 471 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 MRRFQ96E11 262 aaKnown RBP8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 CD2BP2O95400 341 aaKnown RBP8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 INHAP05111 366 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 FSHRP23945 695 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 GRM5P41594 1212 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 GIPC2Q8TF65 315 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 SCG3Q8WXD2 468 aaKnown RBP8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 ARHGAP4P98171 946 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms