RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 OVOS2A0A0J9YW53 1432 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 OVOS2Q6IE36 1432 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 DMRT2Q9Y5R5 561 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 REC8O95072 547 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 TAF7Q15545 349 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-203ENST00000502773 PCDHB15Q9Y5E8 787 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 CDC45O75419 566 aa9.15□□□□□ -0.94
PDGFC-203ENST00000502773 C22orf23Q9BZE7 217 aa9.15□□□□□ -0.94
PDGFC-203ENST00000502773 ABCC4O15439 1325 aa9.15□□□□□ -0.94
PDGFC-203ENST00000502773 KCNA6P17658 529 aa9.15□□□□□ -0.94
PDGFC-203ENST00000502773 BRPF3Q9ULD4 1205 aa9.15□□□□□ -0.94
PDGFC-203ENST00000502773 MON2Q7Z3U7 1717 aa9.15□□□□□ -0.94
PDGFC-203ENST00000502773 TEFQ10587 303 aa9.15□□□□□ -0.95
PDGFC-203ENST00000502773 CIZ1Q9ULV3 898 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-203ENST00000502773 PRR36Q9H6K5 1346 aa9.14□□□□□ -0.95
PDGFC-203ENST00000502773 CEBPAP49715 358 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-203ENST00000502773 L1TD1Q5T7N2 865 aaKnown RBP9.14□□□□□ -0.95
PDGFC-203ENST00000502773 GNAI2P04899 355 aa9.14□□□□□ -0.95
PDGFC-203ENST00000502773 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-203ENST00000502773 DDX58O95786 925 aaKnown RBP9.13□□□□□ -0.95
PDGFC-203ENST00000502773 IP6K1Q92551 441 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 PHACTR3Q96KR7 559 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 GBP4Q96PP9 640 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 CHMP5Q9NZZ3 219 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 IGSF1Q8N6C5 1336 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 SETD1AO15047 1707 aaKnown RBP9.13□□□□□ -0.95
PDGFC-203ENST00000502773 PLEKHG2Q9H7P9 1386 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 RLBP1P12271 317 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 ATF3P18847 181 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-203ENST00000502773 TBC1D32Q96NH3 1257 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 MAP3K19Q56UN5 1328 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 MSH6P52701 1360 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 NRXN3Q9Y4C0 1643 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 HSP90AB1P08238 724 aaKnown RBP9.13□□□□□ -0.95
PDGFC-203ENST00000502773 GPATCH3Q96I76 525 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 AKAP12Q02952 1782 aa9.13□□□□□ -0.95
PDGFC-203ENST00000502773 FER1L4A9Z1Z3 1794 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 SKOR2Q2VWA4 1001 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-203ENST00000502773 NUTM2FA1L443 756 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 EPB41L2O43491 1005 aaKnown RBP9.12□□□□□ -0.95
PDGFC-203ENST00000502773 SLC4A2P04920 1241 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 ANKRD44Q8N8A2 993 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 MAP3K5Q99683 1374 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 RAB11FIP3O75154 756 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 MCM2P49736 904 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 ESCO1Q5FWF5 840 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-203ENST00000502773 TRIM44Q96DX7 344 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-203ENST00000502773 NCOA3Q9Y6Q9 1424 aa9.12□□□□□ -0.95
PDGFC-203ENST00000502773 ST18O60284 1047 aa9.11□□□□□ -0.95
PDGFC-203ENST00000502773 ISY1Q9ULR0 285 aaKnown RBP9.11□□□□□ -0.95
PDGFC-203ENST00000502773 KDRP35968 1356 aa9.11□□□□□ -0.95
PDGFC-203ENST00000502773 ELL2O00472 640 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-203ENST00000502773 HOXC9P31274 260 aa9.11□□□□□ -0.95
PDGFC-203ENST00000502773 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
PDGFC-203ENST00000502773 HSP90AB2PQ58FF8 381 aa9.11□□□□□ -0.95
PDGFC-203ENST00000502773 DCTPP1Q9H773 170 aa9.11□□□□□ -0.95
PDGFC-203ENST00000502773 MAP2P11137 1827 aaKnown RBP9.11□□□□□ -0.95
PDGFC-203ENST00000502773 C3P01024 1663 aa9.11□□□□□ -0.95
PDGFC-203ENST00000502773 SOX12O15370 315 aa9.11□□□□□ -0.95
PDGFC-203ENST00000502773 CEP170BQ9Y4F5 1589 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-203ENST00000502773 RABEP1Q15276 862 aa9.1□□□□□ -0.95
PDGFC-203ENST00000502773 SNX21Q969T3 373 aa9.1□□□□□ -0.95
PDGFC-203ENST00000502773 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-203ENST00000502773 ERC1Q8IUD2 1116 aa9.1□□□□□ -0.95
PDGFC-203ENST00000502773 AKAP4Q5JQC9 854 aa9.1□□□□□ -0.95
PDGFC-203ENST00000502773 LNPKQ9C0E8 428 aa9.1□□□□□ -0.95
PDGFC-203ENST00000502773 C19orf44Q9H6X5 657 aa9.1□□□□□ -0.95
PDGFC-203ENST00000502773 SETD1BQ9UPS6 1966 aaKnown RBP9.1□□□□□ -0.95
PDGFC-203ENST00000502773 NPHP4O75161 1426 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-203ENST00000502773 SSH2Q76I76 1423 aa9.1□□□□□ -0.95
PDGFC-203ENST00000502773 SPG7Q9UQ90 795 aa9.09□□□□□ -0.95
PDGFC-203ENST00000502773 NCAPD2Q15021 1401 aa9.09□□□□□ -0.95
PDGFC-203ENST00000502773 NRKQ7Z2Y5 1582 aa9.09□□□□□ -0.95
PDGFC-203ENST00000502773 RAPGEF4Q8WZA2 1011 aa9.09□□□□□ -0.95
PDGFC-203ENST00000502773 ANP32BQ92688 251 aaKnown RBP9.09□□□□□ -0.95
PDGFC-203ENST00000502773 EYA1Q99502 592 aa9.09□□□□□ -0.95
PDGFC-203ENST00000502773 C8orf58Q8NAV2 365 aa9.09□□□□□ -0.95
PDGFC-203ENST00000502773 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.96
PDGFC-203ENST00000502773 UBTFL1P0CB47 393 aaPredicted RBP9.08□□□□□ -0.96
PDGFC-203ENST00000502773 SLC4A10Q6U841 1118 aa9.08□□□□□ -0.96
PDGFC-203ENST00000502773 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
PDGFC-203ENST00000502773 KLHL34Q8N239 644 aa9.08□□□□□ -0.96
PDGFC-203ENST00000502773 BBXQ8WY36 941 aaPredicted RBP9.08□□□□□ -0.96
PDGFC-203ENST00000502773 CWC22Q9HCG8 908 aaKnown RBP9.08□□□□□ -0.96
PDGFC-203ENST00000502773 ZRANB1Q9UGI0 708 aa9.08□□□□□ -0.96
PDGFC-203ENST00000502773 AOX1Q06278 1338 aa9.08□□□□□ -0.96
PDGFC-203ENST00000502773 RBM25P49756 843 aaKnown RBP9.08□□□□□ -0.96
PDGFC-203ENST00000502773 TAF7LQ5H9L4 462 aa9.08□□□□□ -0.96
PDGFC-203ENST00000502773 HDGFL1Q5TGJ6 251 aa9.08□□□□□ -0.96
PDGFC-203ENST00000502773 RUFY2Q8WXA3 655 aa9.08□□□□□ -0.96
PDGFC-203ENST00000502773 RIMS1Q86UR5 1692 aaKnown RBP9.08□□□□□ -0.96
PDGFC-203ENST00000502773 NEXNQ0ZGT2 675 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 GSE1Q14687 1217 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 TOPAZ1Q8N9V7 1692 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 ERC2O15083 957 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms