RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ANKLE2Q86XL3 938 aa20.42■□□□□ 0.86
HMGXB3-201ENST00000502717 FSD1Q9BTV5 496 aa20.42■□□□□ 0.86
HMGXB3-201ENST00000502717 FOSBP53539 338 aa20.42■□□□□ 0.86
HMGXB3-201ENST00000502717 IL16Q14005 1332 aa20.42■□□□□ 0.86
HMGXB3-201ENST00000502717 PDRG1Q9NUG6 133 aa20.41■□□□□ 0.86
HMGXB3-201ENST00000502717 PTPN14Q15678 1187 aa20.41■□□□□ 0.86
HMGXB3-201ENST00000502717 NOLC1Q14978 699 aaKnown RBP eCLIP20.41■□□□□ 0.86
HMGXB3-201ENST00000502717 TSPYL1Q9H0U9 437 aa20.41■□□□□ 0.86
HMGXB3-201ENST00000502717 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 PDILTQ8N807 584 aa20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 CCDC94Q9BW85 323 aaPredicted RBP20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 UPF3BQ9BZI7 483 aaKnown RBP20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 CALCOCO1Q9P1Z2 691 aa20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 ERC1Q8IUD2 1116 aa20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 RAPGEF4Q8WZA2 1011 aa20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 TOMM22Q9NS69 142 aa20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 CABP1Q9NZU7 370 aa20.4■□□□□ 0.86
HMGXB3-201ENST00000502717 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.86
HMGXB3-201ENST00000502717 CFAP45Q9UL16 551 aa20.39■□□□□ 0.86
HMGXB3-201ENST00000502717 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.85
HMGXB3-201ENST00000502717 SMAP1Q8IYB5 467 aaPredicted RBP20.39■□□□□ 0.85
HMGXB3-201ENST00000502717 CEP57L1Q8IYX8 460 aa20.39■□□□□ 0.85
HMGXB3-201ENST00000502717 EIF4G3O43432 1585 aaKnown RBP20.39■□□□□ 0.85
HMGXB3-201ENST00000502717 PIK3C2GO75747 1445 aa20.39■□□□□ 0.85
HMGXB3-201ENST00000502717 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
HMGXB3-201ENST00000502717 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.85
HMGXB3-201ENST00000502717 TNNT1P13805 278 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 FILIP1Q7Z7B0 1213 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 GTPBP4Q9BZE4 634 aaKnown RBP20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 ERICH4A6NGS2 130 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 NOL7Q9UMY1 257 aaKnown RBP20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 ARHGEF12Q9NZN5 1544 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 TRDNQ13061 729 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 TTC22Q5TAA0 569 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 KIF18AQ8NI77 898 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 MX1P20591 662 aa20.38■□□□□ 0.85
HMGXB3-201ENST00000502717 AKAP17AQ02040 695 aaKnown RBP20.37■□□□□ 0.85
HMGXB3-201ENST00000502717 NUP160Q12769 1436 aa20.37■□□□□ 0.85
HMGXB3-201ENST00000502717 UBXN4Q92575 508 aa20.37■□□□□ 0.85
HMGXB3-201ENST00000502717 JAKMIP1Q96N16 626 aaKnown RBP20.37■□□□□ 0.85
HMGXB3-201ENST00000502717 RBM25P49756 843 aaKnown RBP20.37■□□□□ 0.85
HMGXB3-201ENST00000502717 TEX14Q8IWB6 1497 aa20.37■□□□□ 0.85
HMGXB3-201ENST00000502717 TESK2Q96S53 571 aa20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 SCAND2PQ9GZW5 306 aaPredicted RBP20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 SMARCA5O60264 1052 aaPredicted RBP20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 DISP1Q96F81 1524 aa20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 NEMFO60524 1076 aa20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 RLBP1P12271 317 aa20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 FAM135AQ9P2D6 1515 aa20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 CEBPZQ03701 1054 aaKnown RBP20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 BLOC1S2Q6QNY1 142 aa20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 DUOX2Q9NRD8 1548 aa20.36■□□□□ 0.85
HMGXB3-201ENST00000502717 ARHGAP45Q92619 1136 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 RTEL1-TNFRSF6BF6WH68 1400 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 ADGRF5Q8IZF2 1346 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 STK38Q15208 465 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 NSD2O96028 1365 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 NLRP6P59044 892 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 UBE2HP62256 183 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 TMCO3Q6UWJ1 677 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 RUFY1Q96T51 708 aa20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 SH2B1Q9NRF2 756 aaPredicted RBP20.35■□□□□ 0.85
HMGXB3-201ENST00000502717 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 UHRF1BP1Q6BDS2 1440 aa20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 SPDYE4A6NLX3 237 aa20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 EXOC6BQ9Y2D4 811 aa20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 SAMD9Q5K651 1589 aa20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 GDPD2Q9HCC8 539 aa20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 PAXBP1Q9Y5B6 917 aa20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 C16orf45Q96MC5 204 aaPredicted RBP20.34■□□□□ 0.85
HMGXB3-201ENST00000502717 ME1P48163 572 aa20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 LIMCH1Q9UPQ0 1083 aa20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 CASTP20810 708 aaKnown RBP20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 SAFBQ15424 915 aaKnown RBP eCLIP20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 CAMK4Q16566 473 aa20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 SPATA31E1Q6ZUB1 1445 aa20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.85
HMGXB3-201ENST00000502717 SERPINC1P01008 464 aa20.33■□□□□ 0.84
HMGXB3-201ENST00000502717 SYCP2Q9BX26 1530 aa20.33■□□□□ 0.84
HMGXB3-201ENST00000502717 CBFA2T2O43439 604 aa20.33■□□□□ 0.84
HMGXB3-201ENST00000502717 ERLIN1O75477 346 aa20.33■□□□□ 0.84
HMGXB3-201ENST00000502717 EIF3JO75822 258 aaKnown RBP20.33■□□□□ 0.84
HMGXB3-201ENST00000502717 TMX3Q96JJ7 454 aa20.33■□□□□ 0.84
HMGXB3-201ENST00000502717 RALYLQ86SE5 291 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 CLIP2Q9UDT6 1046 aa20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 CWC27Q6UX04 472 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 NLRP2Q9NX02 1062 aa20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 MAP4K4O95819 1239 aaPredicted RBP20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-201ENST00000502717 DHX16O60231 1041 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms