RNA–Protein interactions for RNA: ENST00000502640.5

LDB2-203, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-203ENST00000502640 BRPF3Q9ULD4 1205 aa10.38□□□□□ -0.75
LDB2-203ENST00000502640 FANCIQ9NVI1 1328 aa10.38□□□□□ -0.75
LDB2-203ENST00000502640 USP19O94966 1318 aa10.38□□□□□ -0.75
LDB2-203ENST00000502640 SPATA31A3Q5VYP0 1347 aa10.38□□□□□ -0.75
LDB2-203ENST00000502640 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
LDB2-203ENST00000502640 EXOSC9Q06265 439 aaKnown RBP10.37□□□□□ -0.75
LDB2-203ENST00000502640 MTHFSDQ2M296 383 aaKnown RBP10.37□□□□□ -0.75
LDB2-203ENST00000502640 MYH16Q9H6N6 1097 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 PRDM10Q9NQV6 1147 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 TNS3Q68CZ2 1445 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 RNF123Q5XPI4 1314 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 PXDNQ92626 1479 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
LDB2-203ENST00000502640 EXOC6Q8TAG9 804 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 ANKRD24Q8TF21 1146 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 ZFP91Q96JP5 570 aaPredicted RBP10.37□□□□□ -0.75
LDB2-203ENST00000502640 MED1Q15648 1581 aaPredicted RBP10.37□□□□□ -0.75
LDB2-203ENST00000502640 ARHGEF10O15013 1369 aa10.37□□□□□ -0.75
LDB2-203ENST00000502640 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
LDB2-203ENST00000502640 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
LDB2-203ENST00000502640 ALS2Q96Q42 1657 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 CSB-PGBD3P0DP91 1061 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 CANXP27824 592 aaKnown RBP10.35□□□□□ -0.75
LDB2-203ENST00000502640 PLCB2Q00722 1185 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 MIS18AQ9NYP9 233 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 RTL1A6NKG5 1358 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 KIAA0232Q92628 1395 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 USP54Q70EL1 1684 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 SLIT3O75094 1523 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 RGPD1P0DJD0 1748 aa10.35□□□□□ -0.75
LDB2-203ENST00000502640 TCERG1O14776 1098 aaKnown RBP10.35□□□□□ -0.75
LDB2-203ENST00000502640 HSP90B1P14625 803 aaKnown RBP10.34□□□□□ -0.75
LDB2-203ENST00000502640 CRBNQ96SW2 442 aa10.34□□□□□ -0.75
LDB2-203ENST00000502640 NLRP2Q9NX02 1062 aa10.34□□□□□ -0.75
LDB2-203ENST00000502640 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
LDB2-203ENST00000502640 KIF24Q5T7B8 1368 aa10.34□□□□□ -0.75
LDB2-203ENST00000502640 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 KDRP35968 1356 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 LMOD3Q0VAK6 560 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 RTF1Q92541 710 aaKnown RBP10.33□□□□□ -0.76
LDB2-203ENST00000502640 PRDM11Q9NQV5 511 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 MBIPQ9NS73 344 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 PPP4R2Q9NY27 417 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 TNNQ9UQP3 1299 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 RGPD2P0DJD1 1756 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 RARSP54136 660 aaKnown RBP10.33□□□□□ -0.76
LDB2-203ENST00000502640 KRT24Q2M2I5 525 aa10.33□□□□□ -0.76
LDB2-203ENST00000502640 TSPYL6Q8N831 410 aa10.32□□□□□ -0.76
LDB2-203ENST00000502640 CLUAP1Q96AJ1 413 aa10.32□□□□□ -0.76
LDB2-203ENST00000502640 ERBB3P21860 1342 aa10.32□□□□□ -0.76
LDB2-203ENST00000502640 RGPD5Q99666 1765 aa10.32□□□□□ -0.76
LDB2-203ENST00000502640 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
LDB2-203ENST00000502640 SMC4Q9NTJ3 1288 aa10.31□□□□□ -0.76
LDB2-203ENST00000502640 LTBP4Q8N2S1 1624 aa10.31□□□□□ -0.76
LDB2-203ENST00000502640 GNAI1P63096 354 aa10.31□□□□□ -0.76
LDB2-203ENST00000502640 PANK1Q8TE04 598 aa10.31□□□□□ -0.76
LDB2-203ENST00000502640 STRN4Q9NRL3 753 aa10.31□□□□□ -0.76
LDB2-203ENST00000502640 IL16Q14005 1332 aa10.31□□□□□ -0.76
LDB2-203ENST00000502640 IFT57Q9NWB7 429 aa10.3□□□□□ -0.76
LDB2-203ENST00000502640 PHRF1Q9P1Y6 1649 aaKnown RBP10.3□□□□□ -0.76
LDB2-203ENST00000502640 GNAT3A8MTJ3 354 aa10.3□□□□□ -0.76
LDB2-203ENST00000502640 CALD1Q05682 793 aaKnown RBP10.3□□□□□ -0.76
LDB2-203ENST00000502640 CNPY4Q8N129 248 aa10.3□□□□□ -0.76
LDB2-203ENST00000502640 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.3□□□□□ -0.76
LDB2-203ENST00000502640 C8orf58Q8NAV2 365 aa10.3□□□□□ -0.76
LDB2-203ENST00000502640 SSH1Q8WYL5 1049 aa10.3□□□□□ -0.76
LDB2-203ENST00000502640 USP35Q9P2H5 1018 aa10.3□□□□□ -0.76
LDB2-203ENST00000502640 ZNF530Q6P9A1 599 aaPredicted RBP10.29□□□□□ -0.76
LDB2-203ENST00000502640 ROBO1Q9Y6N7 1651 aa10.29□□□□□ -0.76
LDB2-203ENST00000502640 MPRIPQ6WCQ1 1025 aa10.29□□□□□ -0.76
LDB2-203ENST00000502640 BCCIPQ9P287 314 aaKnown RBP eCLIP10.29□□□□□ -0.76
LDB2-203ENST00000502640 IL17REQ8NFR9 667 aa10.28□□□□□ -0.76
LDB2-203ENST00000502640 SECISBP2LQ93073 1101 aaKnown RBP10.28□□□□□ -0.76
LDB2-203ENST00000502640 LGR6Q9HBX8 967 aa10.28□□□□□ -0.76
LDB2-203ENST00000502640 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
LDB2-203ENST00000502640 COG6Q9Y2V7 657 aa10.28□□□□□ -0.76
LDB2-203ENST00000502640 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
LDB2-203ENST00000502640 ZNF853P0CG23 659 aa10.28□□□□□ -0.76
LDB2-203ENST00000502640 MAP3K5Q99683 1374 aa10.27□□□□□ -0.76
LDB2-203ENST00000502640 RLBP1P12271 317 aa10.27□□□□□ -0.76
LDB2-203ENST00000502640 TWISTNBQ3B726 338 aaPredicted RBP10.27□□□□□ -0.76
LDB2-203ENST00000502640 TOM1L2Q6ZVM7 507 aa10.27□□□□□ -0.76
LDB2-203ENST00000502640 RAPGEF4Q8WZA2 1011 aa10.27□□□□□ -0.76
LDB2-203ENST00000502640 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
LDB2-203ENST00000502640 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
LDB2-203ENST00000502640 ADAMTS2O95450 1211 aa10.27□□□□□ -0.77
LDB2-203ENST00000502640 TMED8Q6PL24 325 aaPredicted RBP10.27□□□□□ -0.77
LDB2-203ENST00000502640 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
LDB2-203ENST00000502640 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.77
LDB2-203ENST00000502640 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
LDB2-203ENST00000502640 EVA1CP58658 441 aa10.26□□□□□ -0.77
LDB2-203ENST00000502640 PLEKHO1Q53GL0 409 aaPredicted RBP10.26□□□□□ -0.77
LDB2-203ENST00000502640 CRB1P82279 1406 aa10.26□□□□□ -0.77
LDB2-203ENST00000502640 NHSL1Q5SYE7 1610 aa10.26□□□□□ -0.77
LDB2-203ENST00000502640 VAMP4O75379 141 aa10.26□□□□□ -0.77
LDB2-203ENST00000502640 C1orf141Q5JVX7 400 aa10.26□□□□□ -0.77
LDB2-203ENST00000502640 NOB1Q9ULX3 412 aaKnown RBP10.26□□□□□ -0.77
LDB2-203ENST00000502640 CHL1O00533 1208 aa10.25□□□□□ -0.77
LDB2-203ENST00000502640 LARP1Q6PKG0 1096 aaKnown RBP10.25□□□□□ -0.77
LDB2-203ENST00000502640 CRYBG1Q9Y4K1 1723 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms