RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 TIMP2P16035 220 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 NCOA4Q13772 614 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 PLEKHM2Q8IWE5 1019 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 ZFAND3Q9H8U3 227 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 RFX1P22670 979 aa8.51□□□□□ -1.05
CDC42SE2-204ENST00000502639 ERVK-9P63128 1117 aa8.51□□□□□ -1.05
CDC42SE2-204ENST00000502639 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
CDC42SE2-204ENST00000502639 KANK4Q5T7N3 995 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE2-204ENST00000502639 TRIM47Q96LD4 638 aa8.51□□□□□ -1.05
CDC42SE2-204ENST00000502639 CYLDQ9NQC7 956 aa8.51□□□□□ -1.05
CDC42SE2-204ENST00000502639 ZIC2O95409 532 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-204ENST00000502639 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
CDC42SE2-204ENST00000502639 DHX9Q08211 1270 aaKnown RBP8.5□□□□□ -1.05
CDC42SE2-204ENST00000502639 CBLBQ13191 982 aa8.5□□□□□ -1.05
CDC42SE2-204ENST00000502639 CCDC125Q86Z20 511 aa8.5□□□□□ -1.05
CDC42SE2-204ENST00000502639 EMILIN1Q9Y6C2 1016 aa8.5□□□□□ -1.05
CDC42SE2-204ENST00000502639 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-204ENST00000502639 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-204ENST00000502639 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
CDC42SE2-204ENST00000502639 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
CDC42SE2-204ENST00000502639 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
CDC42SE2-204ENST00000502639 CLDN10P78369 228 aa8.47□□□□□ -1.05
CDC42SE2-204ENST00000502639 CC2D2BQ6DHV5 1058 aa8.47□□□□□ -1.05
CDC42SE2-204ENST00000502639 Q6ZVU0 165 aa8.47□□□□□ -1.05
CDC42SE2-204ENST00000502639 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
CDC42SE2-204ENST00000502639 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
CDC42SE2-204ENST00000502639 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE2-204ENST00000502639 LZTS3O60299 673 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE2-204ENST00000502639 STAU1O95793 577 aaKnown RBP8.46□□□□□ -1.06
CDC42SE2-204ENST00000502639 EML3Q32P44 896 aa8.46□□□□□ -1.06
CDC42SE2-204ENST00000502639 DKK1O94907 266 aa8.45□□□□□ -1.06
CDC42SE2-204ENST00000502639 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-204ENST00000502639 USP4Q13107 963 aa8.45□□□□□ -1.06
CDC42SE2-204ENST00000502639 AGBL1Q96MI9 1066 aa8.45□□□□□ -1.06
CDC42SE2-204ENST00000502639 KIAA1024Q9UPX6 916 aa8.45□□□□□ -1.06
CDC42SE2-204ENST00000502639 CAPN5O15484 640 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE2-204ENST00000502639 CRTC2Q53ET0 693 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE2-204ENST00000502639 VRTNQ9H8Y1 702 aa8.44□□□□□ -1.06
CDC42SE2-204ENST00000502639 SENP2Q9HC62 589 aa8.44□□□□□ -1.06
CDC42SE2-204ENST00000502639 NOD1Q9Y239 953 aa8.44□□□□□ -1.06
CDC42SE2-204ENST00000502639 GTF2IP78347 998 aa8.43□□□□□ -1.06
CDC42SE2-204ENST00000502639 MEIOBQ8N635 442 aa8.43□□□□□ -1.06
CDC42SE2-204ENST00000502639 PBXIP1Q96AQ6 731 aa8.43□□□□□ -1.06
CDC42SE2-204ENST00000502639 MYCP01106 439 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE2-204ENST00000502639 ADH1AP07327 375 aa8.42□□□□□ -1.06
CDC42SE2-204ENST00000502639 PTK7Q13308 1070 aa8.42□□□□□ -1.06
CDC42SE2-204ENST00000502639 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
CDC42SE2-204ENST00000502639 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
CDC42SE2-204ENST00000502639 RASA1P20936 1047 aa8.41□□□□□ -1.06
CDC42SE2-204ENST00000502639 SCNN1DP51172 638 aa8.41□□□□□ -1.06
CDC42SE2-204ENST00000502639 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
CDC42SE2-204ENST00000502639 TMEM229AB2RXF0 380 aa8.4□□□□□ -1.06
CDC42SE2-204ENST00000502639 BMP1P13497 986 aa8.4□□□□□ -1.06
CDC42SE2-204ENST00000502639 GMPRP36959 345 aa8.4□□□□□ -1.06
CDC42SE2-204ENST00000502639 SIRT1Q96EB6 747 aa8.4□□□□□ -1.06
CDC42SE2-204ENST00000502639 ARXQ96QS3 562 aa8.4□□□□□ -1.06
CDC42SE2-204ENST00000502639 DNAAF2Q9NVR5 837 aaKnown RBP8.4□□□□□ -1.06
CDC42SE2-204ENST00000502639 ZMIZ1Q9ULJ6 1067 aa8.4□□□□□ -1.06
CDC42SE2-204ENST00000502639 USP17L15C9J2P7 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L10C9JJH3 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L13C9JLJ4 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L12C9JPN9 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L11C9JVI0 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L21D6R901 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L18D6R9N7 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L22D6RA61 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L17D6RBQ6 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L19D6RCP7 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L20D6RJB6 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 ATG7O95352 703 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 PTGIRP43119 386 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 RELBQ01201 579 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 USP17L24Q0WX57 530 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 TRIM50Q86XT4 487 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 ZNF594Q96JF6 807 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 ETNK1Q9HBU6 452 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 RAB6BQ9NRW1 208 aa8.39□□□□□ -1.07
CDC42SE2-204ENST00000502639 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 A0A1W2PRU2 124 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 FAM196BA6NMK8 535 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 IL2RAP01589 272 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 VEGFBP49765 207 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 CYP2U1Q7Z449 544 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 LARGE2Q8N3Y3 721 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 KIFC2Q96AC6 838 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 ARHGEF10LQ9HCE6 1279 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 HRH3Q9Y5N1 445 aa8.38□□□□□ -1.07
CDC42SE2-204ENST00000502639 GNRH1P01148 92 aa8.37□□□□□ -1.07
CDC42SE2-204ENST00000502639 MRPL14Q6P1L8 145 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-204ENST00000502639 SIX5Q8N196 739 aa8.37□□□□□ -1.07
CDC42SE2-204ENST00000502639 TPCN2Q8NHX9 752 aa8.37□□□□□ -1.07
CDC42SE2-204ENST00000502639 NXF1Q9UBU9 619 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-204ENST00000502639 SFI1A8K8P3 1242 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms