RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 SLC15A2Q16348 729 aa30.65■■■□□ 2.5
SDHA-202ENST00000502379 CGNL1Q0VF96 1302 aa30.65■■■□□ 2.5
SDHA-202ENST00000502379 KIF24Q5T7B8 1368 aa30.65■■■□□ 2.5
SDHA-202ENST00000502379 BTAF1O14981 1849 aa30.63■■■□□ 2.49
SDHA-202ENST00000502379 PRIM1P49642 420 aaKnown RBP30.63■■■□□ 2.49
SDHA-202ENST00000502379 PPM1GO15355 546 aaPredicted RBP30.62■■■□□ 2.49
SDHA-202ENST00000502379 RAPGEF4Q8WZA2 1011 aa30.62■■■□□ 2.49
SDHA-202ENST00000502379 SYTL4Q96C24 671 aaPredicted RBP30.6■■■□□ 2.49
SDHA-202ENST00000502379 LRRC4BQ9NT99 713 aa30.6■■■□□ 2.49
SDHA-202ENST00000502379 CASZ1Q86V15 1759 aa30.59■■■□□ 2.49
SDHA-202ENST00000502379 SHANK3Q9BYB0 1731 aa30.59■■■□□ 2.49
SDHA-202ENST00000502379 TATP17735 454 aaPredicted RBP30.59■■■□□ 2.49
SDHA-202ENST00000502379 PANK3Q9H999 370 aa30.59■■■□□ 2.49
SDHA-202ENST00000502379 ZBTB7AO95365 584 aa30.58■■■□□ 2.49
SDHA-202ENST00000502379 PPP1R1BQ9UD71 204 aaPredicted RBP30.57■■■□□ 2.48
SDHA-202ENST00000502379 POLKQ9UBT6 870 aa30.56■■■□□ 2.48
SDHA-202ENST00000502379 NSD2O96028 1365 aa30.55■■■□□ 2.48
SDHA-202ENST00000502379 WASHC2AQ641Q2 1341 aa30.55■■■□□ 2.48
SDHA-202ENST00000502379 TNNT2P45379 298 aaPredicted RBP30.54■■■□□ 2.48
SDHA-202ENST00000502379 ATF5Q9Y2D1 282 aaPredicted RBP30.54■■■□□ 2.48
SDHA-202ENST00000502379 ZNF827Q17R98 1081 aa30.53■■■□□ 2.48
SDHA-202ENST00000502379 PAPPAQ13219 1627 aa30.52■■■□□ 2.48
SDHA-202ENST00000502379 KCNQ4P56696 695 aa30.52■■■□□ 2.48
SDHA-202ENST00000502379 DOT1LQ8TEK3 1739 aa30.52■■■□□ 2.48
SDHA-202ENST00000502379 SLC27A3Q5K4L6 730 aa30.51■■■□□ 2.47
SDHA-202ENST00000502379 PTGER2P43116 358 aa30.5■■■□□ 2.47
SDHA-202ENST00000502379 MAP2P11137 1827 aaKnown RBP30.5■■■□□ 2.47
SDHA-202ENST00000502379 EYA1Q99502 592 aa30.49■■■□□ 2.47
SDHA-202ENST00000502379 ANKRD26Q9UPS8 1709 aa30.49■■■□□ 2.47
SDHA-202ENST00000502379 PCDH11XQ9BZA7 1347 aa30.48■■■□□ 2.47
SDHA-202ENST00000502379 PCDH11YQ9BZA8 1340 aa30.48■■■□□ 2.47
SDHA-202ENST00000502379 CYP27B1O15528 508 aa30.48■■■□□ 2.47
SDHA-202ENST00000502379 AKT1S1Q96B36 256 aa30.48■■■□□ 2.47
SDHA-202ENST00000502379 NCAPD2Q15021 1401 aa30.47■■■□□ 2.47
SDHA-202ENST00000502379 MTFR1LQ9H019 292 aa30.45■■■□□ 2.47
SDHA-202ENST00000502379 EIF4A2Q14240 407 aaKnown RBP30.43■■■□□ 2.46
SDHA-202ENST00000502379 SGIP1Q9BQI5 828 aa30.42■■■□□ 2.46
SDHA-202ENST00000502379 CCNL1Q9UK58 526 aaPredicted RBP30.41■■■□□ 2.46
SDHA-202ENST00000502379 LY75O60449 1722 aa30.39■■■□□ 2.46
SDHA-202ENST00000502379 MPRIPQ6WCQ1 1025 aa30.39■■■□□ 2.46
SDHA-202ENST00000502379 SPG7Q9UQ90 795 aa30.39■■■□□ 2.46
SDHA-202ENST00000502379 MORC1Q86VD1 984 aa30.38■■■□□ 2.45
SDHA-202ENST00000502379 PKD1L3Q7Z443 1732 aa30.37■■■□□ 2.45
SDHA-202ENST00000502379 NKX1-1Q15270 411 aaPredicted RBP30.37■■■□□ 2.45
SDHA-202ENST00000502379 TFCP2L1Q9NZI6 479 aa30.37■■■□□ 2.45
SDHA-202ENST00000502379 KIF7Q2M1P5 1343 aa30.37■■■□□ 2.45
SDHA-202ENST00000502379 PNPLA7Q6ZV29 1317 aa30.37■■■□□ 2.45
SDHA-202ENST00000502379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.36■■■□□ 2.45
SDHA-202ENST00000502379 KNSTRNQ9Y448 316 aa30.36■■■□□ 2.45
SDHA-202ENST00000502379 FHDC1Q9C0D6 1143 aaPredicted RBP30.33■■■□□ 2.45
SDHA-202ENST00000502379 PIGBQ92521 554 aa30.32■■■□□ 2.44
SDHA-202ENST00000502379 TOGARAM1Q9Y4F4 1720 aa30.32■■■□□ 2.44
SDHA-202ENST00000502379 PALLDQ8WX93 1383 aa30.31■■■□□ 2.44
SDHA-202ENST00000502379 IGSF1Q8N6C5 1336 aa30.31■■■□□ 2.44
SDHA-202ENST00000502379 SLC16A10Q8TF71 515 aa30.31■■■□□ 2.44
SDHA-202ENST00000502379 ARXQ96QS3 562 aa30.31■■■□□ 2.44
SDHA-202ENST00000502379 PHKG2P15735 406 aa30.3■■■□□ 2.44
SDHA-202ENST00000502379 AMER1Q5JTC6 1135 aaPredicted RBP30.3■■■□□ 2.44
SDHA-202ENST00000502379 SYT17Q9BSW7 474 aa30.3■■■□□ 2.44
SDHA-202ENST00000502379 IFNL2Q8IZJ0 200 aa30.29■■■□□ 2.44
SDHA-202ENST00000502379 QSER1Q2KHR3 1735 aa30.27■■■□□ 2.44
SDHA-202ENST00000502379 TUBGCP6Q96RT7 1819 aa30.27■■■□□ 2.44
SDHA-202ENST00000502379 ITGB4P16144 1822 aa30.26■■■□□ 2.44
SDHA-202ENST00000502379 DCAF8L1A6NGE4 600 aa30.26■■■□□ 2.43
SDHA-202ENST00000502379 SMARCC1Q92922 1105 aaPredicted RBP30.26■■■□□ 2.43
SDHA-202ENST00000502379 COL23A1Q86Y22 540 aaPredicted RBP30.25■■■□□ 2.43
SDHA-202ENST00000502379 AEBP1Q8IUX7 1158 aa30.23■■■□□ 2.43
SDHA-202ENST00000502379 TMOD3Q9NYL9 352 aa30.23■■■□□ 2.43
SDHA-202ENST00000502379 PER1O15534 1290 aaPredicted RBP30.22■■■□□ 2.43
SDHA-202ENST00000502379 MSH5O43196 834 aa30.22■■■□□ 2.43
SDHA-202ENST00000502379 ASAP1Q9ULH1 1129 aa30.21■■■□□ 2.43
SDHA-202ENST00000502379 PLEKHG2Q9H7P9 1386 aa30.2■■■□□ 2.43
SDHA-202ENST00000502379 POLD1P28340 1107 aa30.2■■■□□ 2.43
SDHA-202ENST00000502379 IL13P35225 146 aa30.19■■■□□ 2.42
SDHA-202ENST00000502379 PLEKHO1Q53GL0 409 aaPredicted RBP30.19■■■□□ 2.42
SDHA-202ENST00000502379 C5P01031 1676 aa30.19■■■□□ 2.42
SDHA-202ENST00000502379 YY1P25490 414 aa30.18■■■□□ 2.42
SDHA-202ENST00000502379 LOC102724428A0A0B4J2F2 783 aa30.17■■■□□ 2.42
SDHA-202ENST00000502379 SIK1P57059 783 aa30.17■■■□□ 2.42
SDHA-202ENST00000502379 SULT6B1Q6IMI4 303 aa30.17■■■□□ 2.42
SDHA-202ENST00000502379 MAP3K5Q99683 1374 aa30.16■■■□□ 2.42
SDHA-202ENST00000502379 COL24A1Q17RW2 1714 aa30.16■■■□□ 2.42
SDHA-202ENST00000502379 HMGB2P26583 209 aaKnown RBP30.16■■■□□ 2.42
SDHA-202ENST00000502379 AMIGO3Q86WK7 504 aa30.16■■■□□ 2.42
SDHA-202ENST00000502379 ATG3Q9NT62 314 aa30.16■■■□□ 2.42
SDHA-202ENST00000502379 TAF1LQ8IZX4 1826 aa30.15■■■□□ 2.42
SDHA-202ENST00000502379 MTHFSP49914 203 aa30.15■■■□□ 2.42
SDHA-202ENST00000502379 AMOTQ4VCS5 1084 aa30.15■■■□□ 2.42
SDHA-202ENST00000502379 CC2D1BQ5T0F9 858 aaKnown RBP30.15■■■□□ 2.42
SDHA-202ENST00000502379 ZNF530Q6P9A1 599 aaPredicted RBP30.15■■■□□ 2.42
SDHA-202ENST00000502379 MSL1Q68DK7 614 aa30.14■■■□□ 2.42
SDHA-202ENST00000502379 SMIM5Q71RC9 77 aa30.14■■■□□ 2.42
SDHA-202ENST00000502379 KLHL34Q8N239 644 aa30.14■■■□□ 2.42
SDHA-202ENST00000502379 ERVV-2B6SEH9 535 aa30.13■■■□□ 2.41
SDHA-202ENST00000502379 LINC00116Q8NCU8 138 aa30.13■■■□□ 2.41
SDHA-202ENST00000502379 DCAF5Q96JK2 942 aa30.13■■■□□ 2.41
SDHA-202ENST00000502379 AK7Q96M32 723 aa30.13■■■□□ 2.41
SDHA-202ENST00000502379 UTRNP46939 3433 aa30.12■■■□□ 2.41
SDHA-202ENST00000502379 HSP90AB1P08238 724 aaKnown RBP30.12■■■□□ 2.41
SDHA-202ENST00000502379 ITPK1Q13572 414 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms