RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
LMNA-217ENST00000498722 PKD1L3Q7Z443 1732 aa21.71■■□□□ 1.07
LMNA-217ENST00000498722 CENPBP07199 599 aaPredicted RBP21.7■■□□□ 1.06
LMNA-217ENST00000498722 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.06
LMNA-217ENST00000498722 PRKRIP1Q9H875 184 aaPredicted RBP21.69■■□□□ 1.06
LMNA-217ENST00000498722 DOT1LQ8TEK3 1739 aa21.69■■□□□ 1.06
LMNA-217ENST00000498722 NCAPD2Q15021 1401 aa21.67■■□□□ 1.06
LMNA-217ENST00000498722 BAG6P46379 1132 aa21.67■■□□□ 1.06
LMNA-217ENST00000498722 DEFB132Q7Z7B7 95 aa21.67■■□□□ 1.06
LMNA-217ENST00000498722 IGSF1Q8N6C5 1336 aa21.67■■□□□ 1.06
LMNA-217ENST00000498722 NHSQ6T4R5 1651 aa21.67■■□□□ 1.06
LMNA-217ENST00000498722 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
LMNA-217ENST00000498722 PPP2R1AP30153 589 aa21.65■■□□□ 1.06
LMNA-217ENST00000498722 IL13P35225 146 aa21.65■■□□□ 1.06
LMNA-217ENST00000498722 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
LMNA-217ENST00000498722 APBA3O96018 575 aa21.64■■□□□ 1.05
LMNA-217ENST00000498722 ACSBG1Q96GR2 724 aa21.64■■□□□ 1.05
LMNA-217ENST00000498722 YTHDC1Q96MU7 727 aaKnown RBP21.64■■□□□ 1.05
LMNA-217ENST00000498722 BTAF1O14981 1849 aa21.64■■□□□ 1.05
LMNA-217ENST00000498722 PCDH11XQ9BZA7 1347 aa21.64■■□□□ 1.05
LMNA-217ENST00000498722 PCDH11YQ9BZA8 1340 aa21.64■■□□□ 1.05
LMNA-217ENST00000498722 SPG7Q9UQ90 795 aa21.63■■□□□ 1.05
LMNA-217ENST00000498722 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
LMNA-217ENST00000498722 COL3A1P02461 1466 aaPredicted RBP21.63■■□□□ 1.05
LMNA-217ENST00000498722 SULT6B1Q6IMI4 303 aa21.62■■□□□ 1.05
LMNA-217ENST00000498722 AEBP1Q8IUX7 1158 aa21.62■■□□□ 1.05
LMNA-217ENST00000498722 BCL9O00512 1426 aa21.62■■□□□ 1.05
LMNA-217ENST00000498722 ITGB4P16144 1822 aa21.61■■□□□ 1.05
LMNA-217ENST00000498722 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
LMNA-217ENST00000498722 EN1Q05925 392 aaPredicted RBP21.61■■□□□ 1.05
LMNA-217ENST00000498722 VIRMAQ69YN4 1812 aaKnown RBP21.61■■□□□ 1.05
LMNA-217ENST00000498722 HMOX1P09601 288 aa21.59■■□□□ 1.05
LMNA-217ENST00000498722 SYTL4Q96C24 671 aaPredicted RBP21.59■■□□□ 1.05
LMNA-217ENST00000498722 BCL11BQ9C0K0 894 aaPredicted RBP21.59■■□□□ 1.05
LMNA-217ENST00000498722 RGPD3A6NKT7 1758 aaPredicted RBP21.59■■□□□ 1.05
LMNA-217ENST00000498722 RGPD4Q7Z3J3 1758 aa21.59■■□□□ 1.05
LMNA-217ENST00000498722 KCNQ2O43526 872 aa21.58■■□□□ 1.05
LMNA-217ENST00000498722 RALBP1Q15311 655 aa21.58■■□□□ 1.05
LMNA-217ENST00000498722 PTF1AQ7RTS3 328 aa21.58■■□□□ 1.05
LMNA-217ENST00000498722 TOGARAM1Q9Y4F4 1720 aa21.57■■□□□ 1.04
LMNA-217ENST00000498722 RREB1Q92766 1687 aa21.57■■□□□ 1.04
LMNA-217ENST00000498722 CYP27B1O15528 508 aa21.56■■□□□ 1.04
LMNA-217ENST00000498722 KDRP35968 1356 aa21.56■■□□□ 1.04
LMNA-217ENST00000498722 EZH2Q15910 746 aaKnown RBP21.55■■□□□ 1.04
LMNA-217ENST00000498722 PLEKHO1Q53GL0 409 aaPredicted RBP21.55■■□□□ 1.04
LMNA-217ENST00000498722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.55■■□□□ 1.04
LMNA-217ENST00000498722 NUDCQ9Y266 331 aa21.55■■□□□ 1.04
LMNA-217ENST00000498722 NUP188Q5SRE5 1749 aa21.55■■□□□ 1.04
LMNA-217ENST00000498722 ZNF530Q6P9A1 599 aaPredicted RBP21.54■■□□□ 1.04
LMNA-217ENST00000498722 PLEKHG2Q9H7P9 1386 aa21.53■■□□□ 1.04
LMNA-217ENST00000498722 PRIM1P49642 420 aaKnown RBP21.53■■□□□ 1.04
LMNA-217ENST00000498722 AMOTQ4VCS5 1084 aa21.53■■□□□ 1.04
LMNA-217ENST00000498722 IFNL2Q8IZJ0 200 aa21.53■■□□□ 1.04
LMNA-217ENST00000498722 CAMKK2Q96RR4 588 aa21.52■■□□□ 1.03
LMNA-217ENST00000498722 MYBBP1AQ9BQG0 1328 aaKnown RBP21.51■■□□□ 1.03
LMNA-217ENST00000498722 U2AF1L5P0DN76 240 aaPredicted RBP21.51■■□□□ 1.03
LMNA-217ENST00000498722 PHKG2P15735 406 aa21.51■■□□□ 1.03
LMNA-217ENST00000498722 U2AF1Q01081 240 aaKnown RBP eCLIP21.51■■□□□ 1.03
LMNA-217ENST00000498722 C1orf141Q5JVX7 400 aa21.51■■□□□ 1.03
LMNA-217ENST00000498722 SCN11AQ9UI33 1791 aa21.5■■□□□ 1.03
LMNA-217ENST00000498722 MRS2Q9HD23 443 aa21.5■■□□□ 1.03
LMNA-217ENST00000498722 PLSCR1O15162 318 aa21.49■■□□□ 1.03
LMNA-217ENST00000498722 MPRIPQ6WCQ1 1025 aa21.48■■□□□ 1.03
LMNA-217ENST00000498722 LY75O60449 1722 aa21.47■■□□□ 1.03
LMNA-217ENST00000498722 HSP90AB1P08238 724 aaKnown RBP21.46■■□□□ 1.03
LMNA-217ENST00000498722 NKX1-1Q15270 411 aaPredicted RBP21.46■■□□□ 1.03
LMNA-217ENST00000498722 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
LMNA-217ENST00000498722 DCAF5Q96JK2 942 aa21.44■■□□□ 1.02
LMNA-217ENST00000498722 TMOD3Q9NYL9 352 aa21.44■■□□□ 1.02
LMNA-217ENST00000498722 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
LMNA-217ENST00000498722 RSPH6AQ9H0K4 717 aa21.43■■□□□ 1.02
LMNA-217ENST00000498722 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
LMNA-217ENST00000498722 MTHFSDQ2M296 383 aaKnown RBP21.42■■□□□ 1.02
LMNA-217ENST00000498722 KDM6AO15550 1401 aaPredicted RBP21.41■■□□□ 1.02
LMNA-217ENST00000498722 CCDC184Q52MB2 194 aa21.41■■□□□ 1.02
LMNA-217ENST00000498722 AKAP4Q5JQC9 854 aa21.41■■□□□ 1.02
LMNA-217ENST00000498722 NBPF14Q5TI25 921 aa21.41■■□□□ 1.02
LMNA-217ENST00000498722 PSDA5PKW4 1024 aaPredicted RBP21.4■■□□□ 1.02
LMNA-217ENST00000498722 FCHSD2O94868 740 aa21.4■■□□□ 1.02
LMNA-217ENST00000498722 NEFMP07197 916 aa21.4■■□□□ 1.02
LMNA-217ENST00000498722 TAF1LQ8IZX4 1826 aa21.39■■□□□ 1.01
LMNA-217ENST00000498722 PROM2Q8N271 834 aa21.39■■□□□ 1.01
LMNA-217ENST00000498722 GAS2L2Q8NHY3 880 aa21.39■■□□□ 1.01
LMNA-217ENST00000498722 PIGBQ92521 554 aa21.39■■□□□ 1.01
LMNA-217ENST00000498722 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
LMNA-217ENST00000498722 CABP4P57796 275 aa21.38■■□□□ 1.01
LMNA-217ENST00000498722 C5P01031 1676 aa21.38■■□□□ 1.01
LMNA-217ENST00000498722 R3HDM1Q15032 1099 aaKnown RBP21.37■■□□□ 1.01
LMNA-217ENST00000498722 PHACTR3Q96KR7 559 aa21.37■■□□□ 1.01
LMNA-217ENST00000498722 PALLDQ8WX93 1383 aa21.37■■□□□ 1.01
LMNA-217ENST00000498722 WDR43Q15061 677 aaKnown RBP eCLIP21.36■■□□□ 1.01
LMNA-217ENST00000498722 SMARCC1Q92922 1105 aaPredicted RBP21.36■■□□□ 1.01
LMNA-217ENST00000498722 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
LMNA-217ENST00000498722 KCNQ4P56696 695 aa21.35■■□□□ 1.01
LMNA-217ENST00000498722 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
LMNA-217ENST00000498722 ADAMTS7Q9UKP4 1686 aa21.34■■□□□ 1.01
LMNA-217ENST00000498722 GNAT3A8MTJ3 354 aa21.34■■□□□ 1.01
LMNA-217ENST00000498722 SLC27A3Q5K4L6 730 aa21.34■■□□□ 1.01
LMNA-217ENST00000498722 FAM9BQ8IZU0 186 aa21.34■■□□□ 1.01
LMNA-217ENST00000498722 PNNQ9H307 717 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms