RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 MYT1Q01538 1121 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 LMOD3Q0VAK6 560 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 SPATA31A5Q5VU36 1347 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 SPATA31A7Q8IWB4 1347 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 NEFLP07196 543 aa11.52□□□□□ -0.57
TUBA4A-210ENST00000498660 AEBP1Q8IUX7 1158 aa11.52□□□□□ -0.57
TUBA4A-210ENST00000498660 WDR63Q8IWG1 891 aa11.52□□□□□ -0.57
TUBA4A-210ENST00000498660 LTV1Q96GA3 475 aaPredicted RBP11.52□□□□□ -0.57
TUBA4A-210ENST00000498660 EYA1Q99502 592 aa11.52□□□□□ -0.57
TUBA4A-210ENST00000498660 KIAA0232Q92628 1395 aa11.52□□□□□ -0.57
TUBA4A-210ENST00000498660 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
TUBA4A-210ENST00000498660 PSDA5PKW4 1024 aaPredicted RBP11.51□□□□□ -0.57
TUBA4A-210ENST00000498660 ZC3H6P61129 1189 aaKnown RBP11.51□□□□□ -0.57
TUBA4A-210ENST00000498660 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
TUBA4A-210ENST00000498660 RIPK4P57078 832 aa11.5□□□□□ -0.57
TUBA4A-210ENST00000498660 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
TUBA4A-210ENST00000498660 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
TUBA4A-210ENST00000498660 SLFN5Q08AF3 891 aa11.5□□□□□ -0.57
TUBA4A-210ENST00000498660 CDCA7LQ96GN5 454 aa11.5□□□□□ -0.57
TUBA4A-210ENST00000498660 GTF3C3Q9Y5Q9 886 aa11.5□□□□□ -0.57
TUBA4A-210ENST00000498660 ERBB3P21860 1342 aa11.5□□□□□ -0.57
TUBA4A-210ENST00000498660 PARP4Q9UKK3 1724 aaKnown RBP11.49□□□□□ -0.57
TUBA4A-210ENST00000498660 PHACTR3Q96KR7 559 aa11.49□□□□□ -0.57
TUBA4A-210ENST00000498660 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
TUBA4A-210ENST00000498660 PRDM11Q9NQV5 511 aa11.49□□□□□ -0.57
TUBA4A-210ENST00000498660 IL16Q14005 1332 aa11.49□□□□□ -0.57
TUBA4A-210ENST00000498660 PLEKHG2Q9H7P9 1386 aa11.49□□□□□ -0.57
TUBA4A-210ENST00000498660 DISP2A7MBM2 1401 aa11.49□□□□□ -0.57
TUBA4A-210ENST00000498660 FAM182BQ5T319 152 aa11.48□□□□□ -0.57
TUBA4A-210ENST00000498660 DUSP27Q5VZP5 1158 aa11.48□□□□□ -0.57
TUBA4A-210ENST00000498660 GAS2L2Q8NHY3 880 aa11.48□□□□□ -0.57
TUBA4A-210ENST00000498660 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
TUBA4A-210ENST00000498660 COL5A2P05997 1499 aaPredicted RBP11.48□□□□□ -0.57
TUBA4A-210ENST00000498660 THSD7AQ9UPZ6 1657 aa11.48□□□□□ -0.57
TUBA4A-210ENST00000498660 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
TUBA4A-210ENST00000498660 SPATA31A1Q5TZJ5 1347 aa11.47□□□□□ -0.57
TUBA4A-210ENST00000498660 TRMT2AQ8IZ69 625 aaKnown RBP11.47□□□□□ -0.57
TUBA4A-210ENST00000498660 SUPT16HQ9Y5B9 1047 aaKnown RBP11.47□□□□□ -0.57
TUBA4A-210ENST00000498660 CSB-PGBD3P0DP91 1061 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 R3HDM1Q15032 1099 aaKnown RBP11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 NBPF6Q5VWK0 638 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 NBPF4Q96M43 638 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 CAMKK2Q96RR4 588 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
TUBA4A-210ENST00000498660 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.58
TUBA4A-210ENST00000498660 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
TUBA4A-210ENST00000498660 WNK3Q9BYP7 1800 aa11.45□□□□□ -0.58
TUBA4A-210ENST00000498660 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
TUBA4A-210ENST00000498660 EZH2Q15910 746 aaKnown RBP11.45□□□□□ -0.58
TUBA4A-210ENST00000498660 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
TUBA4A-210ENST00000498660 TNS1Q9HBL0 1735 aaKnown RBP11.44□□□□□ -0.58
TUBA4A-210ENST00000498660 FANCIQ9NVI1 1328 aa11.44□□□□□ -0.58
TUBA4A-210ENST00000498660 MTHFSDQ2M296 383 aaKnown RBP11.44□□□□□ -0.58
TUBA4A-210ENST00000498660 RTF1Q92541 710 aaKnown RBP11.44□□□□□ -0.58
TUBA4A-210ENST00000498660 STRN4Q9NRL3 753 aa11.44□□□□□ -0.58
TUBA4A-210ENST00000498660 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 HTATSF1O43719 755 aaKnown RBP11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 TRIM37O94972 964 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 GNAI1P63096 354 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 IFT57Q9NWB7 429 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 OVOS2A0A0G2JMS6 1433 aa11.43□□□□□ -0.58
TUBA4A-210ENST00000498660 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
TUBA4A-210ENST00000498660 MEGF6O75095 1541 aa11.42□□□□□ -0.58
TUBA4A-210ENST00000498660 APBA3O96018 575 aa11.42□□□□□ -0.58
TUBA4A-210ENST00000498660 ADAMTS7Q9UKP4 1686 aa11.42□□□□□ -0.58
TUBA4A-210ENST00000498660 GNAT3A8MTJ3 354 aa11.41□□□□□ -0.58
TUBA4A-210ENST00000498660 CT47B1P0C2W7 299 aaPredicted RBP11.41□□□□□ -0.58
TUBA4A-210ENST00000498660 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
TUBA4A-210ENST00000498660 EVA1CP58658 441 aa11.41□□□□□ -0.58
TUBA4A-210ENST00000498660 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
TUBA4A-210ENST00000498660 RAPGEF4Q8WZA2 1011 aa11.41□□□□□ -0.58
TUBA4A-210ENST00000498660 CRB1P82279 1406 aa11.41□□□□□ -0.58
TUBA4A-210ENST00000498660 TATP17735 454 aaPredicted RBP11.4□□□□□ -0.58
TUBA4A-210ENST00000498660 FKBP8Q14318 412 aa11.4□□□□□ -0.58
TUBA4A-210ENST00000498660 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.58
TUBA4A-210ENST00000498660 TSR2Q969E8 191 aaKnown RBP11.4□□□□□ -0.58
TUBA4A-210ENST00000498660 THUMPD2Q9BTF0 503 aaKnown RBP11.4□□□□□ -0.58
TUBA4A-210ENST00000498660 USP35Q9P2H5 1018 aa11.4□□□□□ -0.58
TUBA4A-210ENST00000498660 SIPA1L3O60292 1781 aaPredicted RBP11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 SCN11AQ9UI33 1791 aa11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 C1orf141Q5JVX7 400 aa11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 MCM10Q7L590 875 aa11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 SHANK3Q9BYB0 1731 aa11.39□□□□□ -0.59
TUBA4A-210ENST00000498660 LAS1LQ9Y4W2 734 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms