RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
LSAMP-206ENST00000498645 PTGER2P43116 358 aa15.34■□□□□ 0.05
LSAMP-206ENST00000498645 PRIM1P49642 420 aaKnown RBP15.34■□□□□ 0.05
LSAMP-206ENST00000498645 ZNF827Q17R98 1081 aa15.34■□□□□ 0.05
LSAMP-206ENST00000498645 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
LSAMP-206ENST00000498645 RAPGEF4Q8WZA2 1011 aa15.34■□□□□ 0.05
LSAMP-206ENST00000498645 LRRC4BQ9NT99 713 aa15.34■□□□□ 0.05
LSAMP-206ENST00000498645 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
LSAMP-206ENST00000498645 KCNQ4P56696 695 aa15.33■□□□□ 0.04
LSAMP-206ENST00000498645 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.04
LSAMP-206ENST00000498645 MTFR1LQ9H019 292 aa15.33■□□□□ 0.04
LSAMP-206ENST00000498645 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.04
LSAMP-206ENST00000498645 FLT4P35916 1363 aa15.33■□□□□ 0.04
LSAMP-206ENST00000498645 LY75O60449 1722 aa15.32■□□□□ 0.04
LSAMP-206ENST00000498645 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
LSAMP-206ENST00000498645 YY1P25490 414 aa15.32■□□□□ 0.04
LSAMP-206ENST00000498645 INSRP06213 1382 aa15.32■□□□□ 0.04
LSAMP-206ENST00000498645 TATP17735 454 aaPredicted RBP15.31■□□□□ 0.04
LSAMP-206ENST00000498645 SLC27A3Q5K4L6 730 aa15.31■□□□□ 0.04
LSAMP-206ENST00000498645 EMILIN1Q9Y6C2 1016 aa15.31■□□□□ 0.04
LSAMP-206ENST00000498645 MAP2P11137 1827 aaKnown RBP15.31■□□□□ 0.04
LSAMP-206ENST00000498645 NSD2O96028 1365 aa15.3■□□□□ 0.04
LSAMP-206ENST00000498645 QSER1Q2KHR3 1735 aa15.3■□□□□ 0.04
LSAMP-206ENST00000498645 FHDC1Q9C0D6 1143 aaPredicted RBP15.3■□□□□ 0.04
LSAMP-206ENST00000498645 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
LSAMP-206ENST00000498645 CGNL1Q0VF96 1302 aa15.29■□□□□ 0.04
LSAMP-206ENST00000498645 ANKRD26Q9UPS8 1709 aa15.29■□□□□ 0.04
LSAMP-206ENST00000498645 KIF24Q5T7B8 1368 aa15.28■□□□□ 0.04
LSAMP-206ENST00000498645 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
LSAMP-206ENST00000498645 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
LSAMP-206ENST00000498645 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
LSAMP-206ENST00000498645 TFCP2L1Q9NZI6 479 aa15.28■□□□□ 0.04
LSAMP-206ENST00000498645 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
LSAMP-206ENST00000498645 ARXQ96QS3 562 aa15.27■□□□□ 0.04
LSAMP-206ENST00000498645 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.04
LSAMP-206ENST00000498645 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.04
LSAMP-206ENST00000498645 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
LSAMP-206ENST00000498645 CCER1Q8TC90 406 aaPredicted RBP15.26■□□□□ 0.03
LSAMP-206ENST00000498645 SYT17Q9BSW7 474 aa15.26■□□□□ 0.03
LSAMP-206ENST00000498645 ITGB4P16144 1822 aa15.26■□□□□ 0.03
LSAMP-206ENST00000498645 PKD1L3Q7Z443 1732 aa15.26■□□□□ 0.03
LSAMP-206ENST00000498645 TOGARAM1Q9Y4F4 1720 aa15.26■□□□□ 0.03
LSAMP-206ENST00000498645 PNPLA7Q6ZV29 1317 aa15.25■□□□□ 0.03
LSAMP-206ENST00000498645 MSH5O43196 834 aa15.25■□□□□ 0.03
LSAMP-206ENST00000498645 C5P01031 1676 aa15.25■□□□□ 0.03
LSAMP-206ENST00000498645 MPRIPQ6WCQ1 1025 aa15.24■□□□□ 0.03
LSAMP-206ENST00000498645 HSPA5P11021 654 aaKnown RBP15.23■□□□□ 0.03
LSAMP-206ENST00000498645 POLD1P28340 1107 aa15.23■□□□□ 0.03
LSAMP-206ENST00000498645 EIF4G2P78344 907 aaKnown RBP eCLIP15.23■□□□□ 0.03
LSAMP-206ENST00000498645 TAF1LQ8IZX4 1826 aa15.22■□□□□ 0.03
LSAMP-206ENST00000498645 CYP27B1O15528 508 aa15.22■□□□□ 0.03
LSAMP-206ENST00000498645 SLC16A10Q8TF71 515 aa15.22■□□□□ 0.03
LSAMP-206ENST00000498645 PALLDQ8WX93 1383 aa15.22■□□□□ 0.03
LSAMP-206ENST00000498645 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
LSAMP-206ENST00000498645 POLKQ9UBT6 870 aa15.21■□□□□ 0.03
LSAMP-206ENST00000498645 COL24A1Q17RW2 1714 aa15.2■□□□□ 0.02
LSAMP-206ENST00000498645 CHD4Q14839 1912 aa15.2■□□□□ 0.02
LSAMP-206ENST00000498645 EYA1Q99502 592 aa15.2■□□□□ 0.02
LSAMP-206ENST00000498645 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
LSAMP-206ENST00000498645 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
LSAMP-206ENST00000498645 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
LSAMP-206ENST00000498645 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
LSAMP-206ENST00000498645 PANK3Q9H999 370 aa15.19■□□□□ 0.02
LSAMP-206ENST00000498645 UTRNP46939 3433 aa15.18■□□□□ 0.02
LSAMP-206ENST00000498645 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
LSAMP-206ENST00000498645 MAP3K5Q99683 1374 aa15.18■□□□□ 0.02
LSAMP-206ENST00000498645 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
LSAMP-206ENST00000498645 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
LSAMP-206ENST00000498645 GPR162Q16538 588 aa15.17■□□□□ 0.02
LSAMP-206ENST00000498645 PIGBQ92521 554 aa15.16■□□□□ 0.02
LSAMP-206ENST00000498645 SMARCC1Q92922 1105 aaPredicted RBP15.16■□□□□ 0.02
LSAMP-206ENST00000498645 NLGN2Q8NFZ4 835 aa15.15■□□□□ 0.02
LSAMP-206ENST00000498645 AK7Q96M32 723 aa15.15■□□□□ 0.02
LSAMP-206ENST00000498645 TMOD3Q9NYL9 352 aa15.15■□□□□ 0.02
LSAMP-206ENST00000498645 GOLGB1Q14789 3259 aaKnown RBP15.14■□□□□ 0.01
LSAMP-206ENST00000498645 PHF14O94880 888 aa15.14■□□□□ 0.01
LSAMP-206ENST00000498645 NKX1-1Q15270 411 aaPredicted RBP15.14■□□□□ 0.01
LSAMP-206ENST00000498645 UBR3Q6ZT12 1888 aa15.14■□□□□ 0.01
LSAMP-206ENST00000498645 PHKG2P15735 406 aa15.13■□□□□ 0.01
LSAMP-206ENST00000498645 MORC1Q86VD1 984 aa15.13■□□□□ 0.01
LSAMP-206ENST00000498645 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
LSAMP-206ENST00000498645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.01
LSAMP-206ENST00000498645 SMIM5Q71RC9 77 aa15.12■□□□□ 0.01
LSAMP-206ENST00000498645 LOC102724428A0A0B4J2F2 783 aa15.11■□□□□ 0.01
LSAMP-206ENST00000498645 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
LSAMP-206ENST00000498645 SIK1P57059 783 aa15.11■□□□□ 0.01
LSAMP-206ENST00000498645 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
LSAMP-206ENST00000498645 ZNF784Q8NCA9 323 aaPredicted RBP15.11■□□□□ 0.01
LSAMP-206ENST00000498645 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
LSAMP-206ENST00000498645 ASAP1Q9ULH1 1129 aa15.11■□□□□ 0.01
LSAMP-206ENST00000498645 IGSF1Q8N6C5 1336 aa15.11■□□□□ 0.01
LSAMP-206ENST00000498645 LINC00116Q8NCU8 138 aa15.1■□□□□ 0.01
LSAMP-206ENST00000498645 KNSTRNQ9Y448 316 aa15.1■□□□□ 0.01
LSAMP-206ENST00000498645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.09■□□□□ 0.01
LSAMP-206ENST00000498645 ATP6V1AP38606 617 aa15.08■□□□□ 0
LSAMP-206ENST00000498645 PLEKHO1Q53GL0 409 aaPredicted RBP15.08■□□□□ 0
LSAMP-206ENST00000498645 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0
LSAMP-206ENST00000498645 AEBP1Q8IUX7 1158 aa15.08■□□□□ 0
LSAMP-206ENST00000498645 ATG3Q9NT62 314 aa15.08■□□□□ 0
LSAMP-206ENST00000498645 GNPATO15228 680 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms