RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM39B-209ENST00000498613 PEAK1Q9H792 1746 aa16.98■□□□□ 0.31
TMEM39B-209ENST00000498613 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
TMEM39B-209ENST00000498613 DEFB132Q7Z7B7 95 aa16.97■□□□□ 0.31
TMEM39B-209ENST00000498613 DDX54Q8TDD1 881 aaKnown RBP16.97■□□□□ 0.31
TMEM39B-209ENST00000498613 FCHSD2O94868 740 aa16.96■□□□□ 0.31
TMEM39B-209ENST00000498613 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
TMEM39B-209ENST00000498613 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
TMEM39B-209ENST00000498613 HMOX1P09601 288 aa16.95■□□□□ 0.3
TMEM39B-209ENST00000498613 PCDH11XQ9BZA7 1347 aa16.94■□□□□ 0.3
TMEM39B-209ENST00000498613 PCDH11YQ9BZA8 1340 aa16.94■□□□□ 0.3
TMEM39B-209ENST00000498613 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
TMEM39B-209ENST00000498613 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
TMEM39B-209ENST00000498613 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
TMEM39B-209ENST00000498613 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
TMEM39B-209ENST00000498613 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
TMEM39B-209ENST00000498613 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
TMEM39B-209ENST00000498613 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
TMEM39B-209ENST00000498613 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
TMEM39B-209ENST00000498613 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
TMEM39B-209ENST00000498613 KDRP35968 1356 aa16.89■□□□□ 0.3
TMEM39B-209ENST00000498613 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
TMEM39B-209ENST00000498613 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
TMEM39B-209ENST00000498613 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
TMEM39B-209ENST00000498613 RGPD2P0DJD1 1756 aa16.88■□□□□ 0.29
TMEM39B-209ENST00000498613 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
TMEM39B-209ENST00000498613 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
TMEM39B-209ENST00000498613 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
TMEM39B-209ENST00000498613 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
TMEM39B-209ENST00000498613 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
TMEM39B-209ENST00000498613 PARP4Q9UKK3 1724 aaKnown RBP16.87■□□□□ 0.29
TMEM39B-209ENST00000498613 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
TMEM39B-209ENST00000498613 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
TMEM39B-209ENST00000498613 MEGF6O75095 1541 aa16.86■□□□□ 0.29
TMEM39B-209ENST00000498613 TRIM37O94972 964 aa16.85■□□□□ 0.29
TMEM39B-209ENST00000498613 PHKG2P15735 406 aa16.85■□□□□ 0.29
TMEM39B-209ENST00000498613 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
TMEM39B-209ENST00000498613 RTF1Q92541 710 aaKnown RBP16.85■□□□□ 0.29
TMEM39B-209ENST00000498613 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
TMEM39B-209ENST00000498613 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
TMEM39B-209ENST00000498613 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
TMEM39B-209ENST00000498613 RGPD1P0DJD0 1748 aa16.84■□□□□ 0.29
TMEM39B-209ENST00000498613 CYP27B1O15528 508 aa16.84■□□□□ 0.29
TMEM39B-209ENST00000498613 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
TMEM39B-209ENST00000498613 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
TMEM39B-209ENST00000498613 KAT6BQ8WYB5 2073 aa16.84■□□□□ 0.29
TMEM39B-209ENST00000498613 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
TMEM39B-209ENST00000498613 CCER2I3L3R5 266 aa16.83■□□□□ 0.28
TMEM39B-209ENST00000498613 BAG6P46379 1132 aa16.83■□□□□ 0.28
TMEM39B-209ENST00000498613 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
TMEM39B-209ENST00000498613 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
TMEM39B-209ENST00000498613 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
TMEM39B-209ENST00000498613 BCL9O00512 1426 aa16.82■□□□□ 0.28
TMEM39B-209ENST00000498613 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
TMEM39B-209ENST00000498613 APBA3O96018 575 aa16.82■□□□□ 0.28
TMEM39B-209ENST00000498613 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
TMEM39B-209ENST00000498613 ACSBG1Q96GR2 724 aa16.82■□□□□ 0.28
TMEM39B-209ENST00000498613 ERVV-2B6SEH9 535 aa16.81■□□□□ 0.28
TMEM39B-209ENST00000498613 PRIM1P49642 420 aaKnown RBP16.81■□□□□ 0.28
TMEM39B-209ENST00000498613 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
TMEM39B-209ENST00000498613 CABP4P57796 275 aa16.8■□□□□ 0.28
TMEM39B-209ENST00000498613 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
TMEM39B-209ENST00000498613 PHACTR3Q96KR7 559 aa16.8■□□□□ 0.28
TMEM39B-209ENST00000498613 TMOD3Q9NYL9 352 aa16.8■□□□□ 0.28
TMEM39B-209ENST00000498613 LRRC37A3O60309 1634 aa16.8■□□□□ 0.28
TMEM39B-209ENST00000498613 WNK3Q9BYP7 1800 aa16.8■□□□□ 0.28
TMEM39B-209ENST00000498613 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
TMEM39B-209ENST00000498613 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
TMEM39B-209ENST00000498613 FAM9BQ8IZU0 186 aa16.78■□□□□ 0.28
TMEM39B-209ENST00000498613 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
TMEM39B-209ENST00000498613 TEFQ10587 303 aa16.77■□□□□ 0.28
TMEM39B-209ENST00000498613 NFE2L2Q16236 605 aa16.77■□□□□ 0.28
TMEM39B-209ENST00000498613 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.28
TMEM39B-209ENST00000498613 PLSCR1O15162 318 aa16.76■□□□□ 0.27
TMEM39B-209ENST00000498613 KCNQ2O43526 872 aa16.76■□□□□ 0.27
TMEM39B-209ENST00000498613 RIPK4P57078 832 aa16.76■□□□□ 0.27
TMEM39B-209ENST00000498613 CCDC184Q52MB2 194 aa16.76■□□□□ 0.27
TMEM39B-209ENST00000498613 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
TMEM39B-209ENST00000498613 RNMTO43148 476 aaKnown RBP16.75■□□□□ 0.27
TMEM39B-209ENST00000498613 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
TMEM39B-209ENST00000498613 MIER1Q8N108 512 aa16.75■□□□□ 0.27
TMEM39B-209ENST00000498613 MAP3K5Q99683 1374 aa16.75■□□□□ 0.27
TMEM39B-209ENST00000498613 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
TMEM39B-209ENST00000498613 NFATC2IPQ8NCF5 419 aa16.74■□□□□ 0.27
TMEM39B-209ENST00000498613 TMPOP42166 694 aaKnown RBP16.73■□□□□ 0.27
TMEM39B-209ENST00000498613 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
TMEM39B-209ENST00000498613 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
TMEM39B-209ENST00000498613 R3HDM1Q15032 1099 aaKnown RBP16.72■□□□□ 0.27
TMEM39B-209ENST00000498613 PIGBQ92521 554 aa16.72■□□□□ 0.27
TMEM39B-209ENST00000498613 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
TMEM39B-209ENST00000498613 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
TMEM39B-209ENST00000498613 NGEFQ8N5V2 710 aa16.71■□□□□ 0.27
TMEM39B-209ENST00000498613 APAF1O14727 1248 aa16.7■□□□□ 0.26
TMEM39B-209ENST00000498613 NBPF14Q5TI25 921 aa16.7■□□□□ 0.26
TMEM39B-209ENST00000498613 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
TMEM39B-209ENST00000498613 IL17REQ8NFR9 667 aa16.7■□□□□ 0.26
TMEM39B-209ENST00000498613 RREB1Q92766 1687 aa16.69■□□□□ 0.26
TMEM39B-209ENST00000498613 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
TMEM39B-209ENST00000498613 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
TMEM39B-209ENST00000498613 BTBD11A6QL63 1104 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms