RNA–Protein interactions for RNA: ENST00000498559.5

AGAP3-225, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-225ENST00000498559 CGNL1Q0VF96 1302 aa24.92■■□□□ 1.58
AGAP3-225ENST00000498559 DDX54Q8TDD1 881 aaKnown RBP24.92■■□□□ 1.58
AGAP3-225ENST00000498559 ZCRB1Q8TBF4 217 aaKnown RBP24.91■■□□□ 1.58
AGAP3-225ENST00000498559 EMILIN1Q9Y6C2 1016 aa24.91■■□□□ 1.58
AGAP3-225ENST00000498559 NCAPD2Q15021 1401 aa24.9■■□□□ 1.58
AGAP3-225ENST00000498559 USHBP1Q8N6Y0 703 aa24.9■■□□□ 1.58
AGAP3-225ENST00000498559 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.58
AGAP3-225ENST00000498559 PPP1R1BQ9UD71 204 aaPredicted RBP24.89■■□□□ 1.58
AGAP3-225ENST00000498559 SLC15A2Q16348 729 aa24.88■■□□□ 1.57
AGAP3-225ENST00000498559 STK32BQ9NY57 414 aa24.88■■□□□ 1.57
AGAP3-225ENST00000498559 NSD2O96028 1365 aa24.88■■□□□ 1.57
AGAP3-225ENST00000498559 PDGFDQ9GZP0 370 aaPredicted RBP24.87■■□□□ 1.57
AGAP3-225ENST00000498559 RAPGEF4Q8WZA2 1011 aa24.86■■□□□ 1.57
AGAP3-225ENST00000498559 POLR3GLQ9BT43 218 aa24.86■■□□□ 1.57
AGAP3-225ENST00000498559 PKD1L3Q7Z443 1732 aa24.86■■□□□ 1.57
AGAP3-225ENST00000498559 LY75O60449 1722 aa24.85■■□□□ 1.57
AGAP3-225ENST00000498559 WASHC2AQ641Q2 1341 aa24.85■■□□□ 1.57
AGAP3-225ENST00000498559 YY1P25490 414 aa24.84■■□□□ 1.57
AGAP3-225ENST00000498559 TATP17735 454 aaPredicted RBP24.83■■□□□ 1.57
AGAP3-225ENST00000498559 PRIM1P49642 420 aaKnown RBP24.83■■□□□ 1.57
AGAP3-225ENST00000498559 LRRC4BQ9NT99 713 aa24.83■■□□□ 1.57
AGAP3-225ENST00000498559 POLKQ9UBT6 870 aa24.82■■□□□ 1.56
AGAP3-225ENST00000498559 QSER1Q2KHR3 1735 aa24.81■■□□□ 1.56
AGAP3-225ENST00000498559 PCDH11XQ9BZA7 1347 aa24.81■■□□□ 1.56
AGAP3-225ENST00000498559 PCDH11YQ9BZA8 1340 aa24.81■■□□□ 1.56
AGAP3-225ENST00000498559 DCAF8L1A6NGE4 600 aa24.8■■□□□ 1.56
AGAP3-225ENST00000498559 SLC27A3Q5K4L6 730 aa24.8■■□□□ 1.56
AGAP3-225ENST00000498559 PANK3Q9H999 370 aa24.8■■□□□ 1.56
AGAP3-225ENST00000498559 ZNF827Q17R98 1081 aa24.79■■□□□ 1.56
AGAP3-225ENST00000498559 SYTL4Q96C24 671 aaPredicted RBP24.79■■□□□ 1.56
AGAP3-225ENST00000498559 TOGARAM1Q9Y4F4 1720 aa24.78■■□□□ 1.56
AGAP3-225ENST00000498559 PPM1GO15355 546 aaPredicted RBP24.78■■□□□ 1.56
AGAP3-225ENST00000498559 ZBTB7AO95365 584 aa24.78■■□□□ 1.56
AGAP3-225ENST00000498559 PTGER2P43116 358 aa24.77■■□□□ 1.56
AGAP3-225ENST00000498559 CYP27B1O15528 508 aa24.76■■□□□ 1.55
AGAP3-225ENST00000498559 AKT1S1Q96B36 256 aa24.76■■□□□ 1.55
AGAP3-225ENST00000498559 TUBGCP6Q96RT7 1819 aa24.76■■□□□ 1.55
AGAP3-225ENST00000498559 EYA1Q99502 592 aa24.75■■□□□ 1.55
AGAP3-225ENST00000498559 MTFR1LQ9H019 292 aa24.74■■□□□ 1.55
AGAP3-225ENST00000498559 ITGB4P16144 1822 aa24.73■■□□□ 1.55
AGAP3-225ENST00000498559 SGIP1Q9BQI5 828 aa24.73■■□□□ 1.55
AGAP3-225ENST00000498559 PLEKHG2Q9H7P9 1386 aa24.72■■□□□ 1.55
AGAP3-225ENST00000498559 TNNT2P45379 298 aaPredicted RBP24.72■■□□□ 1.55
AGAP3-225ENST00000498559 ATF5Q9Y2D1 282 aaPredicted RBP24.72■■□□□ 1.55
AGAP3-225ENST00000498559 EIF4A2Q14240 407 aaKnown RBP24.71■■□□□ 1.55
AGAP3-225ENST00000498559 COL24A1Q17RW2 1714 aa24.71■■□□□ 1.55
AGAP3-225ENST00000498559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.7■■□□□ 1.54
AGAP3-225ENST00000498559 KIF7Q2M1P5 1343 aa24.69■■□□□ 1.54
AGAP3-225ENST00000498559 KCNQ4P56696 695 aa24.69■■□□□ 1.54
AGAP3-225ENST00000498559 NKX1-1Q15270 411 aaPredicted RBP24.69■■□□□ 1.54
AGAP3-225ENST00000498559 CCNL1Q9UK58 526 aaPredicted RBP24.68■■□□□ 1.54
AGAP3-225ENST00000498559 SPG7Q9UQ90 795 aa24.68■■□□□ 1.54
AGAP3-225ENST00000498559 CHD4Q14839 1912 aa24.68■■□□□ 1.54
AGAP3-225ENST00000498559 C5P01031 1676 aa24.68■■□□□ 1.54
AGAP3-225ENST00000498559 PNPLA7Q6ZV29 1317 aa24.67■■□□□ 1.54
AGAP3-225ENST00000498559 IGSF1Q8N6C5 1336 aa24.67■■□□□ 1.54
AGAP3-225ENST00000498559 TAF1LQ8IZX4 1826 aa24.66■■□□□ 1.54
AGAP3-225ENST00000498559 UTRNP46939 3433 aa24.65■■□□□ 1.54
AGAP3-225ENST00000498559 KNSTRNQ9Y448 316 aa24.65■■□□□ 1.54
AGAP3-225ENST00000498559 PALLDQ8WX93 1383 aa24.65■■□□□ 1.54
AGAP3-225ENST00000498559 MORC1Q86VD1 984 aa24.64■■□□□ 1.54
AGAP3-225ENST00000498559 SLC16A10Q8TF71 515 aa24.64■■□□□ 1.54
AGAP3-225ENST00000498559 AMER1Q5JTC6 1135 aaPredicted RBP24.63■■□□□ 1.53
AGAP3-225ENST00000498559 MPRIPQ6WCQ1 1025 aa24.63■■□□□ 1.53
AGAP3-225ENST00000498559 TFCP2L1Q9NZI6 479 aa24.63■■□□□ 1.53
AGAP3-225ENST00000498559 PHKG2P15735 406 aa24.61■■□□□ 1.53
AGAP3-225ENST00000498559 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
AGAP3-225ENST00000498559 IFNL2Q8IZJ0 200 aa24.6■■□□□ 1.53
AGAP3-225ENST00000498559 PIGBQ92521 554 aa24.6■■□□□ 1.53
AGAP3-225ENST00000498559 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
AGAP3-225ENST00000498559 FHDC1Q9C0D6 1143 aaPredicted RBP24.6■■□□□ 1.53
AGAP3-225ENST00000498559 SMARCC1Q92922 1105 aaPredicted RBP24.59■■□□□ 1.53
AGAP3-225ENST00000498559 ARXQ96QS3 562 aa24.59■■□□□ 1.53
AGAP3-225ENST00000498559 C4BP0C0L5 1744 aa24.58■■□□□ 1.52
AGAP3-225ENST00000498559 PER1O15534 1290 aaPredicted RBP24.56■■□□□ 1.52
AGAP3-225ENST00000498559 HMGB2P26583 209 aaKnown RBP24.56■■□□□ 1.52
AGAP3-225ENST00000498559 KDRP35968 1356 aa24.55■■□□□ 1.52
AGAP3-225ENST00000498559 TMOD3Q9NYL9 352 aa24.54■■□□□ 1.52
AGAP3-225ENST00000498559 UBR3Q6ZT12 1888 aa24.53■■□□□ 1.52
AGAP3-225ENST00000498559 COL23A1Q86Y22 540 aaPredicted RBP24.53■■□□□ 1.52
AGAP3-225ENST00000498559 AEBP1Q8IUX7 1158 aa24.53■■□□□ 1.52
AGAP3-225ENST00000498559 IL13P35225 146 aa24.52■■□□□ 1.52
AGAP3-225ENST00000498559 GOLGB1Q14789 3259 aaKnown RBP24.52■■□□□ 1.51
AGAP3-225ENST00000498559 POLD1P28340 1107 aa24.51■■□□□ 1.51
AGAP3-225ENST00000498559 ZNF784Q8NCA9 323 aaPredicted RBP24.51■■□□□ 1.51
AGAP3-225ENST00000498559 KDM6AO15550 1401 aaPredicted RBP24.51■■□□□ 1.51
AGAP3-225ENST00000498559 AMOTQ4VCS5 1084 aa24.5■■□□□ 1.51
AGAP3-225ENST00000498559 PLEKHO1Q53GL0 409 aaPredicted RBP24.5■■□□□ 1.51
AGAP3-225ENST00000498559 ASAP1Q9ULH1 1129 aa24.5■■□□□ 1.51
AGAP3-225ENST00000498559 NPC1L1Q9UHC9 1359 aa24.5■■□□□ 1.51
AGAP3-225ENST00000498559 ZNF831Q5JPB2 1677 aa24.5■■□□□ 1.51
AGAP3-225ENST00000498559 LOC102724428A0A0B4J2F2 783 aa24.49■■□□□ 1.51
AGAP3-225ENST00000498559 ERVV-2B6SEH9 535 aa24.49■■□□□ 1.51
AGAP3-225ENST00000498559 HSP90AB1P08238 724 aaKnown RBP24.49■■□□□ 1.51
AGAP3-225ENST00000498559 SIK1P57059 783 aa24.49■■□□□ 1.51
AGAP3-225ENST00000498559 FLAD1Q8NFF5 587 aa24.49■■□□□ 1.51
AGAP3-225ENST00000498559 DCAF5Q96JK2 942 aa24.49■■□□□ 1.51
AGAP3-225ENST00000498559 ZNF530Q6P9A1 599 aaPredicted RBP24.48■■□□□ 1.51
AGAP3-225ENST00000498559 SULT6B1Q6IMI4 303 aa24.47■■□□□ 1.51
AGAP3-225ENST00000498559 ATG3Q9NT62 314 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms