RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
SNX13-212ENST00000498463 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
SNX13-212ENST00000498463 FAM177A1Q8N128 213 aaPredicted RBP12.76□□□□□ -0.37
SNX13-212ENST00000498463 ZNF687Q8N1G0 1237 aa12.76□□□□□ -0.37
SNX13-212ENST00000498463 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
SNX13-212ENST00000498463 CAPN12Q6ZSI9 719 aa12.75□□□□□ -0.37
SNX13-212ENST00000498463 RGL4Q8IZJ4 473 aa12.75□□□□□ -0.37
SNX13-212ENST00000498463 TSNAXIP1Q2TAA8 658 aa12.74□□□□□ -0.37
SNX13-212ENST00000498463 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
SNX13-212ENST00000498463 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
SNX13-212ENST00000498463 TSEN2Q8NCE0 465 aaKnown RBP12.74□□□□□ -0.37
SNX13-212ENST00000498463 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
SNX13-212ENST00000498463 BCL11AQ9H165 835 aa12.74□□□□□ -0.37
SNX13-212ENST00000498463 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
SNX13-212ENST00000498463 EAPPQ56P03 285 aaPredicted RBP12.73□□□□□ -0.37
SNX13-212ENST00000498463 USP4Q13107 963 aa12.72□□□□□ -0.37
SNX13-212ENST00000498463 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
SNX13-212ENST00000498463 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
SNX13-212ENST00000498463 M0R2N6 131 aa12.71□□□□□ -0.37
SNX13-212ENST00000498463 SLC10A4Q96EP9 437 aa12.71□□□□□ -0.37
SNX13-212ENST00000498463 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
SNX13-212ENST00000498463 HELQQ8TDG4 1101 aa12.7□□□□□ -0.38
SNX13-212ENST00000498463 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
SNX13-212ENST00000498463 NBPF20Q3BBV1 942 aa12.69□□□□□ -0.38
SNX13-212ENST00000498463 BPHLQ86WA6 291 aaPredicted RBP12.69□□□□□ -0.38
SNX13-212ENST00000498463 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
SNX13-212ENST00000498463 ESPNB1AK53 854 aa12.68□□□□□ -0.38
SNX13-212ENST00000498463 HRO43593 1189 aa12.68□□□□□ -0.38
SNX13-212ENST00000498463 P4HBP07237 508 aaKnown RBP12.68□□□□□ -0.38
SNX13-212ENST00000498463 EMP3P54852 163 aa12.68□□□□□ -0.38
SNX13-212ENST00000498463 COPS2P61201 443 aa12.68□□□□□ -0.38
SNX13-212ENST00000498463 AGERQ15109 404 aa12.68□□□□□ -0.38
SNX13-212ENST00000498463 COL26A1Q96A83 441 aa12.68□□□□□ -0.38
SNX13-212ENST00000498463 NAALADL2Q58DX5 795 aa12.67□□□□□ -0.38
SNX13-212ENST00000498463 C4orf48Q5BLP8 95 aa12.67□□□□□ -0.38
SNX13-212ENST00000498463 TLL1O43897 1013 aa12.66□□□□□ -0.38
SNX13-212ENST00000498463 CDK11BP21127 795 aaKnown RBP12.66□□□□□ -0.38
SNX13-212ENST00000498463 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
SNX13-212ENST00000498463 NAA30Q147X3 362 aaPredicted RBP12.66□□□□□ -0.38
SNX13-212ENST00000498463 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
SNX13-212ENST00000498463 FOXJ1Q92949 421 aa12.66□□□□□ -0.38
SNX13-212ENST00000498463 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
SNX13-212ENST00000498463 CDK11AQ9UQ88 783 aaPredicted RBP12.66□□□□□ -0.38
SNX13-212ENST00000498463 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
SNX13-212ENST00000498463 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
SNX13-212ENST00000498463 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNX13-212ENST00000498463 BAP1Q92560 729 aa12.65□□□□□ -0.38
SNX13-212ENST00000498463 RBCK1Q9BYM8 510 aa12.65□□□□□ -0.38
SNX13-212ENST00000498463 BACH2Q9BYV9 841 aa12.65□□□□□ -0.38
SNX13-212ENST00000498463 FAM13AO94988 1023 aa12.64□□□□□ -0.39
SNX13-212ENST00000498463 ADH1BP00325 375 aa12.64□□□□□ -0.39
SNX13-212ENST00000498463 NPR3P17342 541 aa12.64□□□□□ -0.39
SNX13-212ENST00000498463 LSM11P83369 360 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX13-212ENST00000498463 LINC01559Q495D7 138 aa12.64□□□□□ -0.39
SNX13-212ENST00000498463 ZNF358Q9NW07 568 aa12.64□□□□□ -0.39
SNX13-212ENST00000498463 IGFBP4P22692 258 aa12.63□□□□□ -0.39
SNX13-212ENST00000498463 ERCC5P28715 1186 aaPredicted RBP12.63□□□□□ -0.39
SNX13-212ENST00000498463 SF3A1Q15459 793 aaKnown RBP12.63□□□□□ -0.39
SNX13-212ENST00000498463 ZNF511Q8NB15 262 aa12.63□□□□□ -0.39
SNX13-212ENST00000498463 UBXN4Q92575 508 aa12.63□□□□□ -0.39
SNX13-212ENST00000498463 C1QTNF2Q9BXJ5 285 aa12.63□□□□□ -0.39
SNX13-212ENST00000498463 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
SNX13-212ENST00000498463 FOXO3O43524 673 aa12.62□□□□□ -0.39
SNX13-212ENST00000498463 MYCP01106 439 aaPredicted RBP12.62□□□□□ -0.39
SNX13-212ENST00000498463 WNT2BQ93097 391 aa12.62□□□□□ -0.39
SNX13-212ENST00000498463 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
SNX13-212ENST00000498463 SCAMP3O14828 347 aaKnown RBP12.61□□□□□ -0.39
SNX13-212ENST00000498463 HDLBPQ00341 1268 aaKnown RBP12.61□□□□□ -0.39
SNX13-212ENST00000498463 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
SNX13-212ENST00000498463 TREHO43280 583 aa12.6□□□□□ -0.39
SNX13-212ENST00000498463 NDUFB5O43674 189 aa12.6□□□□□ -0.39
SNX13-212ENST00000498463 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNX13-212ENST00000498463 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
SNX13-212ENST00000498463 PPP1R1BQ9UD71 204 aaPredicted RBP12.6□□□□□ -0.39
SNX13-212ENST00000498463 MPSTP25325 297 aa12.59□□□□□ -0.39
SNX13-212ENST00000498463 CDV3Q9UKY7 258 aaKnown RBP12.59□□□□□ -0.39
SNX13-212ENST00000498463 SCTRP47872 440 aa12.58□□□□□ -0.4
SNX13-212ENST00000498463 TRMT44Q8IYL2 757 aaKnown RBP12.58□□□□□ -0.4
SNX13-212ENST00000498463 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
SNX13-212ENST00000498463 ZPR1O75312 459 aa12.57□□□□□ -0.4
SNX13-212ENST00000498463 RAB15P59190 212 aa12.57□□□□□ -0.4
SNX13-212ENST00000498463 LDLRAD1Q5T700 205 aa12.57□□□□□ -0.4
SNX13-212ENST00000498463 SCG3Q8WXD2 468 aaKnown RBP12.57□□□□□ -0.4
SNX13-212ENST00000498463 ST18O60284 1047 aa12.56□□□□□ -0.4
SNX13-212ENST00000498463 C9orf131Q5VYM1 1079 aa12.56□□□□□ -0.4
SNX13-212ENST00000498463 BRPF3Q9ULD4 1205 aa12.56□□□□□ -0.4
SNX13-212ENST00000498463 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
SNX13-212ENST00000498463 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
SNX13-212ENST00000498463 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
SNX13-212ENST00000498463 LDHBP07195 334 aaKnown RBP12.53□□□□□ -0.4
SNX13-212ENST00000498463 SCNN1DP51172 638 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 DSC3Q14574 896 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 PIK3R5Q8WYR1 880 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 OTUD5Q96G74 571 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 FAM161BQ96MY7 647 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 KCTD15Q96SI1 283 aaPredicted RBP12.53□□□□□ -0.4
SNX13-212ENST00000498463 SAP130Q9H0E3 1048 aa12.53□□□□□ -0.4
SNX13-212ENST00000498463 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms