RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 GGNBP2Q9H3C7 697 aa24.59■■□□□ 1.53
SMIM19-206ENST00000498447 PRIM1P49642 420 aaKnown RBP24.58■■□□□ 1.53
SMIM19-206ENST00000498447 AKT1S1Q96B36 256 aa24.58■■□□□ 1.53
SMIM19-206ENST00000498447 QSER1Q2KHR3 1735 aa24.58■■□□□ 1.52
SMIM19-206ENST00000498447 NSD2O96028 1365 aa24.57■■□□□ 1.52
SMIM19-206ENST00000498447 ARXQ96QS3 562 aa24.57■■□□□ 1.52
SMIM19-206ENST00000498447 KIF20BQ96Q89 1820 aa24.56■■□□□ 1.52
SMIM19-206ENST00000498447 SMG6Q86US8 1419 aaKnown RBP24.55■■□□□ 1.52
SMIM19-206ENST00000498447 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
SMIM19-206ENST00000498447 NBPF6Q5VWK0 638 aa24.55■■□□□ 1.52
SMIM19-206ENST00000498447 NBPF4Q96M43 638 aa24.55■■□□□ 1.52
SMIM19-206ENST00000498447 LY75O60449 1722 aa24.55■■□□□ 1.52
SMIM19-206ENST00000498447 KCNQ4P56696 695 aa24.53■■□□□ 1.52
SMIM19-206ENST00000498447 USHBP1Q8N6Y0 703 aa24.53■■□□□ 1.52
SMIM19-206ENST00000498447 TUBGCP6Q96RT7 1819 aa24.53■■□□□ 1.52
SMIM19-206ENST00000498447 PNPLA7Q6ZV29 1317 aa24.53■■□□□ 1.52
SMIM19-206ENST00000498447 MAP3K5Q99683 1374 aa24.53■■□□□ 1.52
SMIM19-206ENST00000498447 CDCA8Q53HL2 280 aa24.52■■□□□ 1.52
SMIM19-206ENST00000498447 SLC16A10Q8TF71 515 aa24.52■■□□□ 1.52
SMIM19-206ENST00000498447 CGNL1Q0VF96 1302 aa24.52■■□□□ 1.52
SMIM19-206ENST00000498447 RAPGEF4Q8WZA2 1011 aa24.51■■□□□ 1.51
SMIM19-206ENST00000498447 INSRP06213 1382 aa24.51■■□□□ 1.51
SMIM19-206ENST00000498447 TFCP2L1Q9NZI6 479 aa24.5■■□□□ 1.51
SMIM19-206ENST00000498447 FLT4P35916 1363 aa24.5■■□□□ 1.51
SMIM19-206ENST00000498447 COL24A1Q17RW2 1714 aa24.49■■□□□ 1.51
SMIM19-206ENST00000498447 HSP90AB2PQ58FF8 381 aa24.49■■□□□ 1.51
SMIM19-206ENST00000498447 TATP17735 454 aaPredicted RBP24.48■■□□□ 1.51
SMIM19-206ENST00000498447 KIF24Q5T7B8 1368 aa24.48■■□□□ 1.51
SMIM19-206ENST00000498447 CCNL1Q9UK58 526 aaPredicted RBP24.47■■□□□ 1.51
SMIM19-206ENST00000498447 POLD1P28340 1107 aa24.46■■□□□ 1.51
SMIM19-206ENST00000498447 CARD14Q9BXL6 1004 aa24.46■■□□□ 1.51
SMIM19-206ENST00000498447 NSD3Q9BZ95 1437 aa24.45■■□□□ 1.51
SMIM19-206ENST00000498447 CHD4Q14839 1912 aa24.45■■□□□ 1.5
SMIM19-206ENST00000498447 PCDH11XQ9BZA7 1347 aa24.44■■□□□ 1.5
SMIM19-206ENST00000498447 PCDH11YQ9BZA8 1340 aa24.44■■□□□ 1.5
SMIM19-206ENST00000498447 KLHL34Q8N239 644 aa24.43■■□□□ 1.5
SMIM19-206ENST00000498447 ZNF784Q8NCA9 323 aaPredicted RBP24.43■■□□□ 1.5
SMIM19-206ENST00000498447 EMILIN1Q9Y6C2 1016 aa24.42■■□□□ 1.5
SMIM19-206ENST00000498447 GOLGB1Q14789 3259 aaKnown RBP24.41■■□□□ 1.5
SMIM19-206ENST00000498447 C5P01031 1676 aa24.4■■□□□ 1.5
SMIM19-206ENST00000498447 PKD1L3Q7Z443 1732 aa24.39■■□□□ 1.5
SMIM19-206ENST00000498447 ANKRD26Q9UPS8 1709 aa24.39■■□□□ 1.5
SMIM19-206ENST00000498447 TOGARAM1Q9Y4F4 1720 aa24.38■■□□□ 1.49
SMIM19-206ENST00000498447 CYP27B1O15528 508 aa24.38■■□□□ 1.49
SMIM19-206ENST00000498447 GPR162Q16538 588 aa24.38■■□□□ 1.49
SMIM19-206ENST00000498447 COL23A1Q86Y22 540 aaPredicted RBP24.38■■□□□ 1.49
SMIM19-206ENST00000498447 TIMELESSQ9UNS1 1208 aa24.38■■□□□ 1.49
SMIM19-206ENST00000498447 NCAPD2Q15021 1401 aa24.37■■□□□ 1.49
SMIM19-206ENST00000498447 MSH5O43196 834 aa24.37■■□□□ 1.49
SMIM19-206ENST00000498447 PALLDQ8WX93 1383 aa24.37■■□□□ 1.49
SMIM19-206ENST00000498447 MPRIPQ6WCQ1 1025 aa24.36■■□□□ 1.49
SMIM19-206ENST00000498447 PPM1GO15355 546 aaPredicted RBP24.35■■□□□ 1.49
SMIM19-206ENST00000498447 NLGN2Q8NFZ4 835 aa24.35■■□□□ 1.49
SMIM19-206ENST00000498447 ITGB4P16144 1822 aa24.35■■□□□ 1.49
SMIM19-206ENST00000498447 TAF1LQ8IZX4 1826 aa24.35■■□□□ 1.49
SMIM19-206ENST00000498447 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.48
SMIM19-206ENST00000498447 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
SMIM19-206ENST00000498447 MAP2P11137 1827 aaKnown RBP24.32■■□□□ 1.48
SMIM19-206ENST00000498447 HMGB2P26583 209 aaKnown RBP24.31■■□□□ 1.48
SMIM19-206ENST00000498447 MSL1Q68DK7 614 aa24.31■■□□□ 1.48
SMIM19-206ENST00000498447 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
SMIM19-206ENST00000498447 SPG7Q9UQ90 795 aa24.3■■□□□ 1.48
SMIM19-206ENST00000498447 CLSPNQ9HAW4 1339 aa24.3■■□□□ 1.48
SMIM19-206ENST00000498447 C4BP0C0L5 1744 aa24.3■■□□□ 1.48
SMIM19-206ENST00000498447 NKX1-1Q15270 411 aaPredicted RBP24.29■■□□□ 1.48
SMIM19-206ENST00000498447 EYA1Q99502 592 aa24.29■■□□□ 1.48
SMIM19-206ENST00000498447 FLAD1Q8NFF5 587 aa24.28■■□□□ 1.48
SMIM19-206ENST00000498447 PIGBQ92521 554 aa24.28■■□□□ 1.48
SMIM19-206ENST00000498447 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
SMIM19-206ENST00000498447 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
SMIM19-206ENST00000498447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMIM19-206ENST00000498447 AK7Q96M32 723 aa24.25■■□□□ 1.47
SMIM19-206ENST00000498447 PCGF6Q9BYE7 350 aa24.24■■□□□ 1.47
SMIM19-206ENST00000498447 UBR3Q6ZT12 1888 aa24.24■■□□□ 1.47
SMIM19-206ENST00000498447 YBX3P16989 372 aaKnown RBP eCLIP24.23■■□□□ 1.47
SMIM19-206ENST00000498447 AMIGO3Q86WK7 504 aa24.23■■□□□ 1.47
SMIM19-206ENST00000498447 TNNT2P45379 298 aaPredicted RBP24.22■■□□□ 1.47
SMIM19-206ENST00000498447 EIF4A2Q14240 407 aaKnown RBP24.22■■□□□ 1.47
SMIM19-206ENST00000498447 TMOD3Q9NYL9 352 aa24.22■■□□□ 1.47
SMIM19-206ENST00000498447 LOC102724428A0A0B4J2F2 783 aa24.21■■□□□ 1.47
SMIM19-206ENST00000498447 GRIN3BO60391 1043 aa24.21■■□□□ 1.47
SMIM19-206ENST00000498447 PHKG2P15735 406 aa24.21■■□□□ 1.47
SMIM19-206ENST00000498447 SIK1P57059 783 aa24.21■■□□□ 1.47
SMIM19-206ENST00000498447 IFNL2Q8IZJ0 200 aa24.21■■□□□ 1.47
SMIM19-206ENST00000498447 PHF14O94880 888 aa24.2■■□□□ 1.46
SMIM19-206ENST00000498447 CD2APQ9Y5K6 639 aa24.2■■□□□ 1.46
SMIM19-206ENST00000498447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.19■■□□□ 1.46
SMIM19-206ENST00000498447 C1QTNF8P60827 252 aa24.19■■□□□ 1.46
SMIM19-206ENST00000498447 SMIM5Q71RC9 77 aa24.19■■□□□ 1.46
SMIM19-206ENST00000498447 LINC00116Q8NCU8 138 aa24.19■■□□□ 1.46
SMIM19-206ENST00000498447 PLEKHG2Q9H7P9 1386 aa24.18■■□□□ 1.46
SMIM19-206ENST00000498447 ASAP1Q9ULH1 1129 aa24.18■■□□□ 1.46
SMIM19-206ENST00000498447 SSFA2P28290 1259 aa24.17■■□□□ 1.46
SMIM19-206ENST00000498447 EIF4G2P78344 907 aaKnown RBP eCLIP24.17■■□□□ 1.46
SMIM19-206ENST00000498447 IGSF1Q8N6C5 1336 aa24.16■■□□□ 1.46
SMIM19-206ENST00000498447 HSPA5P11021 654 aaKnown RBP24.16■■□□□ 1.46
SMIM19-206ENST00000498447 ITPK1Q13572 414 aa24.15■■□□□ 1.46
SMIM19-206ENST00000498447 ATP6V1AP38606 617 aa24.14■■□□□ 1.45
SMIM19-206ENST00000498447 PANK3Q9H999 370 aa24.14■■□□□ 1.45
SMIM19-206ENST00000498447 ATG3Q9NT62 314 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms