RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 KCNQ2O43526 872 aa20.02■□□□□ 0.8
HPS1-214ENST00000498219 DDX10Q13206 875 aaKnown RBP20.02■□□□□ 0.8
HPS1-214ENST00000498219 ZCRB1Q8TBF4 217 aaKnown RBP20.02■□□□□ 0.8
HPS1-214ENST00000498219 CAMKK2Q96RR4 588 aa20.02■□□□□ 0.8
HPS1-214ENST00000498219 BCL9O00512 1426 aa20.01■□□□□ 0.79
HPS1-214ENST00000498219 NHSQ6T4R5 1651 aa20■□□□□ 0.79
HPS1-214ENST00000498219 BCL11BQ9C0K0 894 aaPredicted RBP20■□□□□ 0.79
HPS1-214ENST00000498219 NCAPD2Q15021 1401 aa20■□□□□ 0.79
HPS1-214ENST00000498219 DOT1LQ8TEK3 1739 aa19.99■□□□□ 0.79
HPS1-214ENST00000498219 ZNF316A6NFI3 1004 aaPredicted RBP19.99■□□□□ 0.79
HPS1-214ENST00000498219 NPC1L1Q9UHC9 1359 aa19.98■□□□□ 0.79
HPS1-214ENST00000498219 RREB1Q92766 1687 aa19.98■□□□□ 0.79
HPS1-214ENST00000498219 BTAF1O14981 1849 aa19.98■□□□□ 0.79
HPS1-214ENST00000498219 MTHFSP49914 203 aa19.98■□□□□ 0.79
HPS1-214ENST00000498219 NUP188Q5SRE5 1749 aa19.97■□□□□ 0.79
HPS1-214ENST00000498219 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
HPS1-214ENST00000498219 PSDA5PKW4 1024 aaPredicted RBP19.95■□□□□ 0.78
HPS1-214ENST00000498219 IGSF1Q8N6C5 1336 aa19.95■□□□□ 0.78
HPS1-214ENST00000498219 IL13P35225 146 aa19.94■□□□□ 0.78
HPS1-214ENST00000498219 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
HPS1-214ENST00000498219 RGPD3A6NKT7 1758 aaPredicted RBP19.93■□□□□ 0.78
HPS1-214ENST00000498219 RGPD4Q7Z3J3 1758 aa19.93■□□□□ 0.78
HPS1-214ENST00000498219 CYP27B1O15528 508 aa19.93■□□□□ 0.78
HPS1-214ENST00000498219 SYTL4Q96C24 671 aaPredicted RBP19.93■□□□□ 0.78
HPS1-214ENST00000498219 PCDH11XQ9BZA7 1347 aa19.92■□□□□ 0.78
HPS1-214ENST00000498219 PCDH11YQ9BZA8 1340 aa19.92■□□□□ 0.78
HPS1-214ENST00000498219 PARD3Q8TEW0 1356 aa19.92■□□□□ 0.78
HPS1-214ENST00000498219 TOGARAM1Q9Y4F4 1720 aa19.91■□□□□ 0.78
HPS1-214ENST00000498219 PLSCR1O15162 318 aa19.91■□□□□ 0.78
HPS1-214ENST00000498219 PRIM1P49642 420 aaKnown RBP19.91■□□□□ 0.78
HPS1-214ENST00000498219 SULT6B1Q6IMI4 303 aa19.9■□□□□ 0.78
HPS1-214ENST00000498219 PROM2Q8N271 834 aa19.9■□□□□ 0.78
HPS1-214ENST00000498219 ITGB4P16144 1822 aa19.89■□□□□ 0.77
HPS1-214ENST00000498219 R3HDM1Q15032 1099 aaKnown RBP19.89■□□□□ 0.77
HPS1-214ENST00000498219 SPG7Q9UQ90 795 aa19.89■□□□□ 0.77
HPS1-214ENST00000498219 COL3A1P02461 1466 aaPredicted RBP19.88■□□□□ 0.77
HPS1-214ENST00000498219 DIAPH1O60610 1272 aaKnown RBP19.87■□□□□ 0.77
HPS1-214ENST00000498219 HMOX1P09601 288 aa19.87■□□□□ 0.77
HPS1-214ENST00000498219 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
HPS1-214ENST00000498219 TXNRD1Q16881 649 aa19.87■□□□□ 0.77
HPS1-214ENST00000498219 PHKG2P15735 406 aa19.85■□□□□ 0.77
HPS1-214ENST00000498219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.85■□□□□ 0.77
HPS1-214ENST00000498219 ANO8Q9HCE9 1232 aaPredicted RBP19.84■□□□□ 0.77
HPS1-214ENST00000498219 KDRP35968 1356 aa19.83■□□□□ 0.77
HPS1-214ENST00000498219 U2SURPO15042 1029 aaKnown RBP19.83■□□□□ 0.77
HPS1-214ENST00000498219 PLEKHO1Q53GL0 409 aaPredicted RBP19.83■□□□□ 0.77
HPS1-214ENST00000498219 NBPF14Q5TI25 921 aa19.83■□□□□ 0.77
HPS1-214ENST00000498219 MPRIPQ6WCQ1 1025 aa19.83■□□□□ 0.77
HPS1-214ENST00000498219 IFNL2Q8IZJ0 200 aa19.83■□□□□ 0.77
HPS1-214ENST00000498219 KCNQ4P56696 695 aa19.82■□□□□ 0.76
HPS1-214ENST00000498219 NKX1-1Q15270 411 aaPredicted RBP19.82■□□□□ 0.76
HPS1-214ENST00000498219 ZNF530Q6P9A1 599 aaPredicted RBP19.82■□□□□ 0.76
HPS1-214ENST00000498219 LY75O60449 1722 aa19.82■□□□□ 0.76
HPS1-214ENST00000498219 LRRC4BQ9NT99 713 aa19.8■□□□□ 0.76
HPS1-214ENST00000498219 CFAP53Q96M91 514 aa19.79■□□□□ 0.76
HPS1-214ENST00000498219 PAPPAQ13219 1627 aa19.78■□□□□ 0.76
HPS1-214ENST00000498219 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
HPS1-214ENST00000498219 PIGBQ92521 554 aa19.78■□□□□ 0.76
HPS1-214ENST00000498219 VIRMAQ69YN4 1812 aaKnown RBP19.78■□□□□ 0.76
HPS1-214ENST00000498219 PLEKHG2Q9H7P9 1386 aa19.77■□□□□ 0.76
HPS1-214ENST00000498219 KDM6AO15550 1401 aaPredicted RBP19.76■□□□□ 0.75
HPS1-214ENST00000498219 C1orf141Q5JVX7 400 aa19.76■□□□□ 0.75
HPS1-214ENST00000498219 STK32BQ9NY57 414 aa19.76■□□□□ 0.75
HPS1-214ENST00000498219 PDGFDQ9GZP0 370 aaPredicted RBP19.75■□□□□ 0.75
HPS1-214ENST00000498219 TMOD3Q9NYL9 352 aa19.75■□□□□ 0.75
HPS1-214ENST00000498219 ZNF827Q17R98 1081 aa19.74■□□□□ 0.75
HPS1-214ENST00000498219 MTHFSDQ2M296 383 aaKnown RBP19.74■□□□□ 0.75
HPS1-214ENST00000498219 CCNL1Q9UK58 526 aaPredicted RBP19.74■□□□□ 0.75
HPS1-214ENST00000498219 SCN11AQ9UI33 1791 aa19.74■□□□□ 0.75
HPS1-214ENST00000498219 PALLDQ8WX93 1383 aa19.73■□□□□ 0.75
HPS1-214ENST00000498219 SLC15A2Q16348 729 aa19.73■□□□□ 0.75
HPS1-214ENST00000498219 DCAF5Q96JK2 942 aa19.73■□□□□ 0.75
HPS1-214ENST00000498219 TUBGCP6Q96RT7 1819 aa19.73■□□□□ 0.75
HPS1-214ENST00000498219 CASZ1Q86V15 1759 aa19.72■□□□□ 0.75
HPS1-214ENST00000498219 HSP90AB1P08238 724 aaKnown RBP19.72■□□□□ 0.75
HPS1-214ENST00000498219 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
HPS1-214ENST00000498219 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.75
HPS1-214ENST00000498219 RALBP1Q15311 655 aa19.72■□□□□ 0.75
HPS1-214ENST00000498219 SLC27A3Q5K4L6 730 aa19.72■□□□□ 0.75
HPS1-214ENST00000498219 ASAP1Q9ULH1 1129 aa19.72■□□□□ 0.75
HPS1-214ENST00000498219 TAF1LQ8IZX4 1826 aa19.72■□□□□ 0.75
HPS1-214ENST00000498219 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
HPS1-214ENST00000498219 C5P01031 1676 aa19.71■□□□□ 0.75
HPS1-214ENST00000498219 ERVV-2B6SEH9 535 aa19.7■□□□□ 0.74
HPS1-214ENST00000498219 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
HPS1-214ENST00000498219 AKAP4Q5JQC9 854 aa19.7■□□□□ 0.74
HPS1-214ENST00000498219 RSPH6AQ9H0K4 717 aa19.7■□□□□ 0.74
HPS1-214ENST00000498219 PRKRIP1Q9H875 184 aaPredicted RBP19.7■□□□□ 0.74
HPS1-214ENST00000498219 LGR6Q9HBX8 967 aa19.7■□□□□ 0.74
HPS1-214ENST00000498219 LRP5O75197 1615 aa19.69■□□□□ 0.74
HPS1-214ENST00000498219 CABP4P57796 275 aa19.69■□□□□ 0.74
HPS1-214ENST00000498219 SMARCC1Q92922 1105 aaPredicted RBP19.69■□□□□ 0.74
HPS1-214ENST00000498219 AKT1S1Q96B36 256 aa19.69■□□□□ 0.74
HPS1-214ENST00000498219 PHACTR3Q96KR7 559 aa19.69■□□□□ 0.74
HPS1-214ENST00000498219 ATG3Q9NT62 314 aa19.69■□□□□ 0.74
HPS1-214ENST00000498219 NFATC2IPQ8NCF5 419 aa19.67■□□□□ 0.74
HPS1-214ENST00000498219 MYBBP1AQ9BQG0 1328 aaKnown RBP19.67■□□□□ 0.74
HPS1-214ENST00000498219 RNMTO43148 476 aaKnown RBP19.66■□□□□ 0.74
HPS1-214ENST00000498219 ZBTB7AO95365 584 aa19.66■□□□□ 0.74
HPS1-214ENST00000498219 QSER1Q2KHR3 1735 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms