RNA–Protein interactions for RNA: ENST00000498094.1

TNXB-207, Transcript of tenascin XB, humanhuman

TSL 5

Gene TNXB, Length 792 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-207ENST00000498094 C5P01031 1676 aa20.4■□□□□ 0.86
TNXB-207ENST00000498094 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
TNXB-207ENST00000498094 ANKRD36BQ8N2N9 1353 aa20.4■□□□□ 0.86
TNXB-207ENST00000498094 NME9Q86XW9 330 aa20.39■□□□□ 0.85
TNXB-207ENST00000498094 RGPD2P0DJD1 1756 aa20.39■□□□□ 0.85
TNXB-207ENST00000498094 CCNL1Q9UK58 526 aaPredicted RBP20.38■□□□□ 0.85
TNXB-207ENST00000498094 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
TNXB-207ENST00000498094 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
TNXB-207ENST00000498094 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
TNXB-207ENST00000498094 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
TNXB-207ENST00000498094 WWC3Q9ULE0 1092 aa20.34■□□□□ 0.85
TNXB-207ENST00000498094 KIF3CO14782 793 aa20.33■□□□□ 0.85
TNXB-207ENST00000498094 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
TNXB-207ENST00000498094 TOGARAM1Q9Y4F4 1720 aa20.31■□□□□ 0.84
TNXB-207ENST00000498094 MEGF6O75095 1541 aa20.3■□□□□ 0.84
TNXB-207ENST00000498094 USP47Q96K76 1375 aa20.3■□□□□ 0.84
TNXB-207ENST00000498094 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
TNXB-207ENST00000498094 APLP1P51693 650 aa20.28■□□□□ 0.84
TNXB-207ENST00000498094 IP6K1Q92551 441 aa20.28■□□□□ 0.84
TNXB-207ENST00000498094 UBR3Q6ZT12 1888 aa20.27■□□□□ 0.84
TNXB-207ENST00000498094 C4BP0C0L5 1744 aa20.27■□□□□ 0.83
TNXB-207ENST00000498094 WDR90Q96KV7 1748 aa20.27■□□□□ 0.83
TNXB-207ENST00000498094 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.83
TNXB-207ENST00000498094 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
TNXB-207ENST00000498094 ZCRB1Q8TBF4 217 aaKnown RBP20.26■□□□□ 0.83
TNXB-207ENST00000498094 EDC4Q6P2E9 1401 aaKnown RBP20.26■□□□□ 0.83
TNXB-207ENST00000498094 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
TNXB-207ENST00000498094 L3MBTL2Q969R5 705 aa20.24■□□□□ 0.83
TNXB-207ENST00000498094 AMIGO3Q86WK7 504 aa20.23■□□□□ 0.83
TNXB-207ENST00000498094 TMC1Q8TDI8 760 aa20.23■□□□□ 0.83
TNXB-207ENST00000498094 ITGB4P16144 1822 aa20.23■□□□□ 0.83
TNXB-207ENST00000498094 FLAD1Q8NFF5 587 aa20.22■□□□□ 0.83
TNXB-207ENST00000498094 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
TNXB-207ENST00000498094 HDGFL2Q7Z4V5 671 aaPredicted RBP20.21■□□□□ 0.83
TNXB-207ENST00000498094 SLC12A5Q9H2X9 1139 aa20.21■□□□□ 0.83
TNXB-207ENST00000498094 KIAA1551Q9HCM1 1747 aa20.21■□□□□ 0.83
TNXB-207ENST00000498094 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
TNXB-207ENST00000498094 PALLDQ8WX93 1383 aa20.21■□□□□ 0.83
TNXB-207ENST00000498094 HOXC9P31274 260 aa20.2■□□□□ 0.82
TNXB-207ENST00000498094 N4BP2Q86UW6 1770 aaPredicted RBP20.2■□□□□ 0.82
TNXB-207ENST00000498094 MAP3K19Q56UN5 1328 aa20.2■□□□□ 0.82
TNXB-207ENST00000498094 COL13A1Q5TAT6 717 aaPredicted RBP20.19■□□□□ 0.82
TNXB-207ENST00000498094 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
TNXB-207ENST00000498094 CAPN15O75808 1086 aa20.18■□□□□ 0.82
TNXB-207ENST00000498094 TOMM70O94826 608 aa20.18■□□□□ 0.82
TNXB-207ENST00000498094 PHF14O94880 888 aa20.18■□□□□ 0.82
TNXB-207ENST00000498094 FBLN1P23142 703 aa20.18■□□□□ 0.82
TNXB-207ENST00000498094 AK7Q96M32 723 aa20.17■□□□□ 0.82
TNXB-207ENST00000498094 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
TNXB-207ENST00000498094 MAP2P11137 1827 aaKnown RBP20.16■□□□□ 0.82
TNXB-207ENST00000498094 AMPHP49418 695 aa20.15■□□□□ 0.82
TNXB-207ENST00000498094 HTRA3P83110 453 aa20.15■□□□□ 0.82
TNXB-207ENST00000498094 NMRK2Q9NPI5 230 aa20.15■□□□□ 0.82
TNXB-207ENST00000498094 PXDNLA1KZ92 1463 aa20.14■□□□□ 0.81
TNXB-207ENST00000498094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.14■□□□□ 0.81
TNXB-207ENST00000498094 NBPF6Q5VWK0 638 aa20.14■□□□□ 0.81
TNXB-207ENST00000498094 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
TNXB-207ENST00000498094 NBPF4Q96M43 638 aa20.14■□□□□ 0.81
TNXB-207ENST00000498094 TERF2IPQ9NYB0 399 aa20.13■□□□□ 0.81
TNXB-207ENST00000498094 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
TNXB-207ENST00000498094 NSD3Q9BZ95 1437 aa20.11■□□□□ 0.81
TNXB-207ENST00000498094 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
TNXB-207ENST00000498094 RAPGEF4Q8WZA2 1011 aa20.11■□□□□ 0.81
TNXB-207ENST00000498094 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
TNXB-207ENST00000498094 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
TNXB-207ENST00000498094 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
TNXB-207ENST00000498094 KLRG1Q96E93 195 aa20.1■□□□□ 0.81
TNXB-207ENST00000498094 COG3Q96JB2 828 aa20.1■□□□□ 0.81
TNXB-207ENST00000498094 PKD1L3Q7Z443 1732 aa20.1■□□□□ 0.81
TNXB-207ENST00000498094 RTL1A6NKG5 1358 aa20.09■□□□□ 0.81
TNXB-207ENST00000498094 SSFA2P28290 1259 aa20.09■□□□□ 0.81
TNXB-207ENST00000498094 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
TNXB-207ENST00000498094 TATP17735 454 aaPredicted RBP20.08■□□□□ 0.81
TNXB-207ENST00000498094 RBM46Q8TBY0 533 aaKnown RBP20.08■□□□□ 0.81
TNXB-207ENST00000498094 SIN3AQ96ST3 1273 aa20.08■□□□□ 0.81
TNXB-207ENST00000498094 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
TNXB-207ENST00000498094 PCNTO95613 3336 aa20.08■□□□□ 0.8
TNXB-207ENST00000498094 CYP27B1O15528 508 aa20.07■□□□□ 0.8
TNXB-207ENST00000498094 RRS1Q15050 365 aaKnown RBP20.07■□□□□ 0.8
TNXB-207ENST00000498094 TNS4Q8IZW8 715 aa20.07■□□□□ 0.8
TNXB-207ENST00000498094 LINC00116Q8NCU8 138 aa20.07■□□□□ 0.8
TNXB-207ENST00000498094 SMARCC1Q92922 1105 aaPredicted RBP20.07■□□□□ 0.8
TNXB-207ENST00000498094 MMP10P09238 476 aa20.06■□□□□ 0.8
TNXB-207ENST00000498094 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
TNXB-207ENST00000498094 ARFGEF1Q9Y6D6 1849 aa20.06■□□□□ 0.8
TNXB-207ENST00000498094 A0A0G2JLW4 131 aa20.05■□□□□ 0.8
TNXB-207ENST00000498094 PRELPP51888 382 aa20.05■□□□□ 0.8
TNXB-207ENST00000498094 ARHGAP27Q6ZUM4 889 aa20.05■□□□□ 0.8
TNXB-207ENST00000498094 C10orf71Q711Q0 1435 aa20.04■□□□□ 0.8
TNXB-207ENST00000498094 PIGBQ92521 554 aa20.04■□□□□ 0.8
TNXB-207ENST00000498094 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
TNXB-207ENST00000498094 GNPATO15228 680 aa20.03■□□□□ 0.8
TNXB-207ENST00000498094 SIK1P57059 783 aa20.03■□□□□ 0.8
TNXB-207ENST00000498094 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
TNXB-207ENST00000498094 CARD11Q9BXL7 1154 aa20.03■□□□□ 0.8
TNXB-207ENST00000498094 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.8
TNXB-207ENST00000498094 C4AP0C0L4 1744 aa20.02■□□□□ 0.8
TNXB-207ENST00000498094 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
TNXB-207ENST00000498094 TNRC6CQ9HCJ0 1690 aaKnown RBP20.01■□□□□ 0.79
TNXB-207ENST00000498094 TGFB2P61812 414 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms