RNA–Protein interactions for RNA: ENST00000497987.1

NUB1-211, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-211ENST00000497987 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
NUB1-211ENST00000497987 NLRP6P59044 892 aa12.65□□□□□ -0.38
NUB1-211ENST00000497987 MYT1Q01538 1121 aa12.65□□□□□ -0.38
NUB1-211ENST00000497987 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
NUB1-211ENST00000497987 COL14A1Q05707 1796 aaKnown RBP12.65□□□□□ -0.38
NUB1-211ENST00000497987 USP19O94966 1318 aa12.64□□□□□ -0.39
NUB1-211ENST00000497987 SPATA31A5Q5VU36 1347 aa12.64□□□□□ -0.39
NUB1-211ENST00000497987 SPATA31A7Q8IWB4 1347 aa12.64□□□□□ -0.39
NUB1-211ENST00000497987 USP6P35125 1406 aa12.63□□□□□ -0.39
NUB1-211ENST00000497987 EVA1CP58658 441 aa12.63□□□□□ -0.39
NUB1-211ENST00000497987 KRT27Q7Z3Y8 459 aa12.63□□□□□ -0.39
NUB1-211ENST00000497987 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
NUB1-211ENST00000497987 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
NUB1-211ENST00000497987 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
NUB1-211ENST00000497987 BRWD3Q6RI45 1802 aa12.62□□□□□ -0.39
NUB1-211ENST00000497987 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
NUB1-211ENST00000497987 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
NUB1-211ENST00000497987 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
NUB1-211ENST00000497987 TTC21BQ7Z4L5 1316 aa12.62□□□□□ -0.39
NUB1-211ENST00000497987 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
NUB1-211ENST00000497987 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
NUB1-211ENST00000497987 CPDO75976 1380 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 SBNO2Q9Y2G9 1366 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 EP400Q96L91 3159 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
NUB1-211ENST00000497987 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
NUB1-211ENST00000497987 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
NUB1-211ENST00000497987 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
NUB1-211ENST00000497987 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
NUB1-211ENST00000497987 CPSF1Q10570 1443 aaKnown RBP12.59□□□□□ -0.39
NUB1-211ENST00000497987 SOX12O15370 315 aa12.58□□□□□ -0.4
NUB1-211ENST00000497987 NRKQ7Z2Y5 1582 aa12.58□□□□□ -0.4
NUB1-211ENST00000497987 DEFB132Q7Z7B7 95 aa12.58□□□□□ -0.4
NUB1-211ENST00000497987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
NUB1-211ENST00000497987 TESK2Q96S53 571 aa12.58□□□□□ -0.4
NUB1-211ENST00000497987 TTC21AQ8NDW8 1320 aa12.57□□□□□ -0.4
NUB1-211ENST00000497987 BLMP54132 1417 aaPredicted RBP12.56□□□□□ -0.4
NUB1-211ENST00000497987 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
NUB1-211ENST00000497987 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
NUB1-211ENST00000497987 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
NUB1-211ENST00000497987 HDGFL2Q7Z4V5 671 aaPredicted RBP12.56□□□□□ -0.4
NUB1-211ENST00000497987 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
NUB1-211ENST00000497987 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
NUB1-211ENST00000497987 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
NUB1-211ENST00000497987 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
NUB1-211ENST00000497987 NME9Q86XW9 330 aa12.55□□□□□ -0.4
NUB1-211ENST00000497987 TCP11L2Q8N4U5 519 aa12.55□□□□□ -0.4
NUB1-211ENST00000497987 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
NUB1-211ENST00000497987 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
NUB1-211ENST00000497987 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
NUB1-211ENST00000497987 CD163L1Q9NR16 1453 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 SLIT3O75094 1523 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 G3V3G9 751 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
NUB1-211ENST00000497987 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 TERF2IPQ9NYB0 399 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 LMO7Q8WWI1 1683 aa12.54□□□□□ -0.4
NUB1-211ENST00000497987 MS4A4AQ96JQ5 239 aa12.53□□□□□ -0.4
NUB1-211ENST00000497987 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
NUB1-211ENST00000497987 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
NUB1-211ENST00000497987 SLC24A1O60721 1099 aa12.52□□□□□ -0.41
NUB1-211ENST00000497987 PDE3BQ13370 1112 aa12.52□□□□□ -0.41
NUB1-211ENST00000497987 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
NUB1-211ENST00000497987 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
NUB1-211ENST00000497987 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 ZNF710Q8N1W2 664 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 USP31Q70CQ4 1352 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 USP47Q96K76 1375 aa12.51□□□□□ -0.41
NUB1-211ENST00000497987 TRIM37O94972 964 aa12.5□□□□□ -0.41
NUB1-211ENST00000497987 BAG6P46379 1132 aa12.5□□□□□ -0.41
NUB1-211ENST00000497987 TMF1P82094 1093 aa12.5□□□□□ -0.41
NUB1-211ENST00000497987 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
NUB1-211ENST00000497987 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
NUB1-211ENST00000497987 CRB1P82279 1406 aa12.5□□□□□ -0.41
NUB1-211ENST00000497987 COL18A1P39060 1754 aa12.5□□□□□ -0.41
NUB1-211ENST00000497987 MON2Q7Z3U7 1717 aa12.49□□□□□ -0.41
NUB1-211ENST00000497987 EDC4Q6P2E9 1401 aaKnown RBP12.49□□□□□ -0.41
NUB1-211ENST00000497987 ERBB3P21860 1342 aa12.49□□□□□ -0.41
NUB1-211ENST00000497987 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
NUB1-211ENST00000497987 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
NUB1-211ENST00000497987 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
NUB1-211ENST00000497987 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
NUB1-211ENST00000497987 NFAT5O94916 1531 aa12.48□□□□□ -0.41
NUB1-211ENST00000497987 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
NUB1-211ENST00000497987 RGPD5Q99666 1765 aa12.47□□□□□ -0.41
NUB1-211ENST00000497987 PPP1R37O75864 691 aa12.46□□□□□ -0.41
NUB1-211ENST00000497987 APBA3O96018 575 aa12.46□□□□□ -0.41
NUB1-211ENST00000497987 FBLN1P23142 703 aa12.46□□□□□ -0.41
NUB1-211ENST00000497987 NINLQ9Y2I6 1382 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms