RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 KIF20BQ96Q89 1820 aa16.33■□□□□ 0.2
NUDCD3-211ENST00000497978 BTAF1O14981 1849 aa16.32■□□□□ 0.2
NUDCD3-211ENST00000497978 CASZ1Q86V15 1759 aa16.32■□□□□ 0.2
NUDCD3-211ENST00000497978 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
NUDCD3-211ENST00000497978 RGPD2P0DJD1 1756 aa16.31■□□□□ 0.2
NUDCD3-211ENST00000497978 KIF24Q5T7B8 1368 aa16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 ZBTB7AO95365 584 aa16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 NBPF6Q5VWK0 638 aa16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 SYTL4Q96C24 671 aaPredicted RBP16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 CARD14Q9BXL6 1004 aa16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 PDGFDQ9GZP0 370 aaPredicted RBP16.3■□□□□ 0.2
NUDCD3-211ENST00000497978 NSD3Q9BZ95 1437 aa16.29■□□□□ 0.2
NUDCD3-211ENST00000497978 INSRP06213 1382 aa16.29■□□□□ 0.2
NUDCD3-211ENST00000497978 FLT4P35916 1363 aa16.29■□□□□ 0.2
NUDCD3-211ENST00000497978 MYOM1P52179 1685 aa16.29■□□□□ 0.2
NUDCD3-211ENST00000497978 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
NUDCD3-211ENST00000497978 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
NUDCD3-211ENST00000497978 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
NUDCD3-211ENST00000497978 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
NUDCD3-211ENST00000497978 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
NUDCD3-211ENST00000497978 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
NUDCD3-211ENST00000497978 MEGF6O75095 1541 aa16.28■□□□□ 0.2
NUDCD3-211ENST00000497978 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
NUDCD3-211ENST00000497978 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
NUDCD3-211ENST00000497978 MTFR1LQ9H019 292 aa16.27■□□□□ 0.2
NUDCD3-211ENST00000497978 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
NUDCD3-211ENST00000497978 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
NUDCD3-211ENST00000497978 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
NUDCD3-211ENST00000497978 LRRC4BQ9NT99 713 aa16.25■□□□□ 0.19
NUDCD3-211ENST00000497978 PAPPAQ13219 1627 aa16.25■□□□□ 0.19
NUDCD3-211ENST00000497978 DOT1LQ8TEK3 1739 aa16.25■□□□□ 0.19
NUDCD3-211ENST00000497978 PTGER2P43116 358 aa16.24■□□□□ 0.19
NUDCD3-211ENST00000497978 EMILIN1Q9Y6C2 1016 aa16.24■□□□□ 0.19
NUDCD3-211ENST00000497978 SHANK3Q9BYB0 1731 aa16.24■□□□□ 0.19
NUDCD3-211ENST00000497978 PCDH11XQ9BZA7 1347 aa16.23■□□□□ 0.19
NUDCD3-211ENST00000497978 PCDH11YQ9BZA8 1340 aa16.23■□□□□ 0.19
NUDCD3-211ENST00000497978 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
NUDCD3-211ENST00000497978 AKT1S1Q96B36 256 aa16.22■□□□□ 0.19
NUDCD3-211ENST00000497978 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
NUDCD3-211ENST00000497978 TFCP2L1Q9NZI6 479 aa16.21■□□□□ 0.19
NUDCD3-211ENST00000497978 NSD2O96028 1365 aa16.21■□□□□ 0.19
NUDCD3-211ENST00000497978 HSPA5P11021 654 aaKnown RBP16.2■□□□□ 0.18
NUDCD3-211ENST00000497978 HMGB2P26583 209 aaKnown RBP16.2■□□□□ 0.18
NUDCD3-211ENST00000497978 SLC16A10Q8TF71 515 aa16.2■□□□□ 0.18
NUDCD3-211ENST00000497978 CCNL1Q9UK58 526 aaPredicted RBP16.2■□□□□ 0.18
NUDCD3-211ENST00000497978 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 YY1P25490 414 aa16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 KCNQ4P56696 695 aa16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 ARXQ96QS3 562 aa16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 LY75O60449 1722 aa16.19■□□□□ 0.18
NUDCD3-211ENST00000497978 SYT17Q9BSW7 474 aa16.18■□□□□ 0.18
NUDCD3-211ENST00000497978 SPG7Q9UQ90 795 aa16.18■□□□□ 0.18
NUDCD3-211ENST00000497978 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
NUDCD3-211ENST00000497978 QSER1Q2KHR3 1735 aa16.17■□□□□ 0.18
NUDCD3-211ENST00000497978 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
NUDCD3-211ENST00000497978 PNPLA7Q6ZV29 1317 aa16.17■□□□□ 0.18
NUDCD3-211ENST00000497978 CYP27B1O15528 508 aa16.16■□□□□ 0.18
NUDCD3-211ENST00000497978 POLD1P28340 1107 aa16.16■□□□□ 0.18
NUDCD3-211ENST00000497978 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
NUDCD3-211ENST00000497978 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
NUDCD3-211ENST00000497978 PANK3Q9H999 370 aa16.16■□□□□ 0.18
NUDCD3-211ENST00000497978 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
NUDCD3-211ENST00000497978 EYA1Q99502 592 aa16.15■□□□□ 0.18
NUDCD3-211ENST00000497978 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
NUDCD3-211ENST00000497978 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
NUDCD3-211ENST00000497978 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
NUDCD3-211ENST00000497978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.172e-10■■□□□ 14.1
NUDCD3-211ENST00000497978 PALLDQ8WX93 1383 aa16.13■□□□□ 0.17
NUDCD3-211ENST00000497978 EIF4A2Q14240 407 aaKnown RBP16.12■□□□□ 0.17
NUDCD3-211ENST00000497978 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
NUDCD3-211ENST00000497978 TUBGCP6Q96RT7 1819 aa16.12■□□□□ 0.17
NUDCD3-211ENST00000497978 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
NUDCD3-211ENST00000497978 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
NUDCD3-211ENST00000497978 ITGB4P16144 1822 aa16.1■□□□□ 0.17
NUDCD3-211ENST00000497978 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
NUDCD3-211ENST00000497978 IFNL2Q8IZJ0 200 aa16.1■□□□□ 0.17
NUDCD3-211ENST00000497978 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
NUDCD3-211ENST00000497978 KNSTRNQ9Y448 316 aa16.1■□□□□ 0.17
NUDCD3-211ENST00000497978 C5P01031 1676 aa16.1■□□□□ 0.17
NUDCD3-211ENST00000497978 TOGARAM1Q9Y4F4 1720 aa16.09■□□□□ 0.17
NUDCD3-211ENST00000497978 COL23A1Q86Y22 540 aaPredicted RBP16.09■□□□□ 0.17
NUDCD3-211ENST00000497978 PIGBQ92521 554 aa16.09■□□□□ 0.17
NUDCD3-211ENST00000497978 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
NUDCD3-211ENST00000497978 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
NUDCD3-211ENST00000497978 PHKG2P15735 406 aa16.08■□□□□ 0.16
NUDCD3-211ENST00000497978 COL24A1Q17RW2 1714 aa16.08■□□□□ 0.16
NUDCD3-211ENST00000497978 AK7Q96M32 723 aa16.07■□□□□ 0.16
NUDCD3-211ENST00000497978 IGSF1Q8N6C5 1336 aa16.07■□□□□ 0.16
NUDCD3-211ENST00000497978 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
NUDCD3-211ENST00000497978 GPR162Q16538 588 aa16.06■□□□□ 0.16
NUDCD3-211ENST00000497978 HSP90AB1P08238 724 aaKnown RBP16.05■□□□□ 0.16
NUDCD3-211ENST00000497978 PLEKHO1Q53GL0 409 aaPredicted RBP16.05■□□□□ 0.16
NUDCD3-211ENST00000497978 LOC102724428A0A0B4J2F2 783 aa16.04■□□□□ 0.16
NUDCD3-211ENST00000497978 SIK1P57059 783 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms