RNA–Protein interactions for RNA: ENST00000497802.1

PLXNA3-209, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-209ENST00000497802 FLT4P35916 1363 aa20.21■□□□□ 0.83
PLXNA3-209ENST00000497802 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
PLXNA3-209ENST00000497802 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
PLXNA3-209ENST00000497802 PANK3Q9H999 370 aa20.21■□□□□ 0.83
PLXNA3-209ENST00000497802 KAT6BQ8WYB5 2073 aa20.2■□□□□ 0.82
PLXNA3-209ENST00000497802 ZBTB7AO95365 584 aa20.2■□□□□ 0.82
PLXNA3-209ENST00000497802 LRRC4BQ9NT99 713 aa20.2■□□□□ 0.82
PLXNA3-209ENST00000497802 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
PLXNA3-209ENST00000497802 DOT1LQ8TEK3 1739 aa20.19■□□□□ 0.82
PLXNA3-209ENST00000497802 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
PLXNA3-209ENST00000497802 CASZ1Q86V15 1759 aa20.18■□□□□ 0.82
PLXNA3-209ENST00000497802 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
PLXNA3-209ENST00000497802 STK32BQ9NY57 414 aa20.18■□□□□ 0.82
PLXNA3-209ENST00000497802 POLKQ9UBT6 870 aa20.18■□□□□ 0.82
PLXNA3-209ENST00000497802 NSD2O96028 1365 aa20.18■□□□□ 0.82
PLXNA3-209ENST00000497802 SLC15A2Q16348 729 aa20.17■□□□□ 0.82
PLXNA3-209ENST00000497802 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
PLXNA3-209ENST00000497802 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
PLXNA3-209ENST00000497802 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
PLXNA3-209ENST00000497802 TATP17735 454 aaPredicted RBP20.15■□□□□ 0.82
PLXNA3-209ENST00000497802 PAPPAQ13219 1627 aa20.15■□□□□ 0.82
PLXNA3-209ENST00000497802 KIF24Q5T7B8 1368 aa20.13■□□□□ 0.81
PLXNA3-209ENST00000497802 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
PLXNA3-209ENST00000497802 EYA1Q99502 592 aa20.13■□□□□ 0.81
PLXNA3-209ENST00000497802 PPP1R1BQ9UD71 204 aaPredicted RBP20.13■□□□□ 0.81
PLXNA3-209ENST00000497802 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
PLXNA3-209ENST00000497802 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
PLXNA3-209ENST00000497802 CYP27B1O15528 508 aa20.12■□□□□ 0.81
PLXNA3-209ENST00000497802 PTGER2P43116 358 aa20.1■□□□□ 0.81
PLXNA3-209ENST00000497802 EIF4A2Q14240 407 aaKnown RBP20.1■□□□□ 0.81
PLXNA3-209ENST00000497802 KIF7Q2M1P5 1343 aa20.09■□□□□ 0.81
PLXNA3-209ENST00000497802 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
PLXNA3-209ENST00000497802 AKT1S1Q96B36 256 aa20.08■□□□□ 0.81
PLXNA3-209ENST00000497802 PCDH11XQ9BZA7 1347 aa20.07■□□□□ 0.8
PLXNA3-209ENST00000497802 PCDH11YQ9BZA8 1340 aa20.07■□□□□ 0.8
PLXNA3-209ENST00000497802 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
PLXNA3-209ENST00000497802 MPRIPQ6WCQ1 1025 aa20.06■□□□□ 0.8
PLXNA3-209ENST00000497802 MORC1Q86VD1 984 aa20.05■□□□□ 0.8
PLXNA3-209ENST00000497802 CCNL1Q9UK58 526 aaPredicted RBP20.05■□□□□ 0.8
PLXNA3-209ENST00000497802 PKD1L3Q7Z443 1732 aa20.05■□□□□ 0.8
PLXNA3-209ENST00000497802 SLC27A3Q5K4L6 730 aa20.04■□□□□ 0.8
PLXNA3-209ENST00000497802 LY75O60449 1722 aa20.04■□□□□ 0.8
PLXNA3-209ENST00000497802 PNPLA7Q6ZV29 1317 aa20.03■□□□□ 0.8
PLXNA3-209ENST00000497802 SGIP1Q9BQI5 828 aa20.03■□□□□ 0.8
PLXNA3-209ENST00000497802 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
PLXNA3-209ENST00000497802 MTFR1LQ9H019 292 aa20.02■□□□□ 0.8
PLXNA3-209ENST00000497802 TUBGCP6Q96RT7 1819 aa20.02■□□□□ 0.79
PLXNA3-209ENST00000497802 AMER1Q5JTC6 1135 aaPredicted RBP20.01■□□□□ 0.79
PLXNA3-209ENST00000497802 AEBP1Q8IUX7 1158 aa20.01■□□□□ 0.79
PLXNA3-209ENST00000497802 PIGBQ92521 554 aa20.01■□□□□ 0.79
PLXNA3-209ENST00000497802 KNSTRNQ9Y448 316 aa20.01■□□□□ 0.79
PLXNA3-209ENST00000497802 PALLDQ8WX93 1383 aa20■□□□□ 0.79
PLXNA3-209ENST00000497802 SMIM5Q71RC9 77 aa20■□□□□ 0.79
PLXNA3-209ENST00000497802 TFCP2L1Q9NZI6 479 aa20■□□□□ 0.79
PLXNA3-209ENST00000497802 SPG7Q9UQ90 795 aa20■□□□□ 0.79
PLXNA3-209ENST00000497802 IGSF1Q8N6C5 1336 aa20■□□□□ 0.79
PLXNA3-209ENST00000497802 FHDC1Q9C0D6 1143 aaPredicted RBP19.99■□□□□ 0.79
PLXNA3-209ENST00000497802 ITGB4P16144 1822 aa19.98■□□□□ 0.79
PLXNA3-209ENST00000497802 PHKG2P15735 406 aa19.98■□□□□ 0.79
PLXNA3-209ENST00000497802 NKX1-1Q15270 411 aaPredicted RBP19.98■□□□□ 0.79
PLXNA3-209ENST00000497802 AMIGO3Q86WK7 504 aa19.97■□□□□ 0.79
PLXNA3-209ENST00000497802 CC2D1BQ5T0F9 858 aaKnown RBP19.96■□□□□ 0.79
PLXNA3-209ENST00000497802 COL23A1Q86Y22 540 aaPredicted RBP19.96■□□□□ 0.79
PLXNA3-209ENST00000497802 PER1O15534 1290 aaPredicted RBP19.95■□□□□ 0.78
PLXNA3-209ENST00000497802 MSH5O43196 834 aa19.95■□□□□ 0.78
PLXNA3-209ENST00000497802 ARXQ96QS3 562 aa19.95■□□□□ 0.78
PLXNA3-209ENST00000497802 SYT17Q9BSW7 474 aa19.95■□□□□ 0.78
PLXNA3-209ENST00000497802 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
PLXNA3-209ENST00000497802 IFNL2Q8IZJ0 200 aa19.94■□□□□ 0.78
PLXNA3-209ENST00000497802 ASAP1Q9ULH1 1129 aa19.94■□□□□ 0.78
PLXNA3-209ENST00000497802 IL13P35225 146 aa19.93■□□□□ 0.78
PLXNA3-209ENST00000497802 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
PLXNA3-209ENST00000497802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.93■□□□□ 0.78
PLXNA3-209ENST00000497802 C5P01031 1676 aa19.93■□□□□ 0.78
PLXNA3-209ENST00000497802 SULT6B1Q6IMI4 303 aa19.92■□□□□ 0.78
PLXNA3-209ENST00000497802 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
PLXNA3-209ENST00000497802 QSER1Q2KHR3 1735 aa19.92■□□□□ 0.78
PLXNA3-209ENST00000497802 MTHFSP49914 203 aa19.91■□□□□ 0.78
PLXNA3-209ENST00000497802 ZNF530Q6P9A1 599 aaPredicted RBP19.91■□□□□ 0.78
PLXNA3-209ENST00000497802 ITPK1Q13572 414 aa19.9■□□□□ 0.78
PLXNA3-209ENST00000497802 LINC00116Q8NCU8 138 aa19.9■□□□□ 0.78
PLXNA3-209ENST00000497802 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
PLXNA3-209ENST00000497802 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.77
PLXNA3-209ENST00000497802 PHF14O94880 888 aa19.89■□□□□ 0.77
PLXNA3-209ENST00000497802 TAF1LQ8IZX4 1826 aa19.89■□□□□ 0.77
PLXNA3-209ENST00000497802 SMARCC1Q92922 1105 aaPredicted RBP19.89■□□□□ 0.77
PLXNA3-209ENST00000497802 LOC102724428A0A0B4J2F2 783 aa19.88■□□□□ 0.77
PLXNA3-209ENST00000497802 SIK1P57059 783 aa19.88■□□□□ 0.77
PLXNA3-209ENST00000497802 PLEKHO1Q53GL0 409 aaPredicted RBP19.88■□□□□ 0.77
PLXNA3-209ENST00000497802 C4BP0C0L5 1744 aa19.88■□□□□ 0.77
PLXNA3-209ENST00000497802 HMOX1P09601 288 aa19.87■□□□□ 0.77
PLXNA3-209ENST00000497802 SLC16A10Q8TF71 515 aa19.87■□□□□ 0.77
PLXNA3-209ENST00000497802 SLC4A9Q96Q91 983 aa19.87■□□□□ 0.77
PLXNA3-209ENST00000497802 YY1P25490 414 aa19.86■□□□□ 0.77
PLXNA3-209ENST00000497802 NLGN2Q8NFZ4 835 aa19.86■□□□□ 0.77
PLXNA3-209ENST00000497802 COL24A1Q17RW2 1714 aa19.85■□□□□ 0.77
PLXNA3-209ENST00000497802 POLD1P28340 1107 aa19.85■□□□□ 0.77
PLXNA3-209ENST00000497802 AK7Q96M32 723 aa19.85■□□□□ 0.77
PLXNA3-209ENST00000497802 UTRNP46939 3433 aa19.85■□□□□ 0.77
PLXNA3-209ENST00000497802 ATP6V1AP38606 617 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms