RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 RGPD2P0DJD1 1756 aa30.64■■■□□ 2.49
CLIC4-204ENST00000497755 SLC24A1O60721 1099 aa30.63■■■□□ 2.49
CLIC4-204ENST00000497755 TFCP2L1Q9NZI6 479 aa30.63■■■□□ 2.49
CLIC4-204ENST00000497755 QSER1Q2KHR3 1735 aa30.62■■■□□ 2.49
CLIC4-204ENST00000497755 NSD2O96028 1365 aa30.62■■■□□ 2.49
CLIC4-204ENST00000497755 POLD1P28340 1107 aa30.6■■■□□ 2.49
CLIC4-204ENST00000497755 NBPF6Q5VWK0 638 aa30.6■■■□□ 2.49
CLIC4-204ENST00000497755 NBPF4Q96M43 638 aa30.6■■■□□ 2.49
CLIC4-204ENST00000497755 COL24A1Q17RW2 1714 aa30.59■■■□□ 2.49
CLIC4-204ENST00000497755 MEGF6O75095 1541 aa30.59■■■□□ 2.49
CLIC4-204ENST00000497755 RRS1Q15050 365 aaKnown RBP30.59■■■□□ 2.49
CLIC4-204ENST00000497755 GPR162Q16538 588 aa30.59■■■□□ 2.49
CLIC4-204ENST00000497755 SHANK3Q9BYB0 1731 aa30.59■■■□□ 2.49
CLIC4-204ENST00000497755 FYB1O15117 783 aa30.58■■■□□ 2.49
CLIC4-204ENST00000497755 DOT1LQ8TEK3 1739 aa30.58■■■□□ 2.49
CLIC4-204ENST00000497755 LY75O60449 1722 aa30.57■■■□□ 2.48
CLIC4-204ENST00000497755 TUBGCP6Q96RT7 1819 aa30.57■■■□□ 2.48
CLIC4-204ENST00000497755 KLHL34Q8N239 644 aa30.56■■■□□ 2.48
CLIC4-204ENST00000497755 GGNBP2Q9H3C7 697 aa30.55■■■□□ 2.48
CLIC4-204ENST00000497755 CCNL1Q9UK58 526 aaPredicted RBP30.55■■■□□ 2.48
CLIC4-204ENST00000497755 RTL1A6NKG5 1358 aa30.54■■■□□ 2.48
CLIC4-204ENST00000497755 USHBP1Q8N6Y0 703 aa30.54■■■□□ 2.48
CLIC4-204ENST00000497755 CGNL1Q0VF96 1302 aa30.52■■■□□ 2.48
CLIC4-204ENST00000497755 COL23A1Q86Y22 540 aaPredicted RBP30.5■■■□□ 2.47
CLIC4-204ENST00000497755 NLGN2Q8NFZ4 835 aa30.5■■■□□ 2.47
CLIC4-204ENST00000497755 RAPGEF4Q8WZA2 1011 aa30.5■■■□□ 2.47
CLIC4-204ENST00000497755 USP47Q96K76 1375 aa30.49■■■□□ 2.47
CLIC4-204ENST00000497755 C1QTNF8P60827 252 aa30.48■■■□□ 2.47
CLIC4-204ENST00000497755 TMF1P82094 1093 aa30.48■■■□□ 2.47
CLIC4-204ENST00000497755 HSP90AB2PQ58FF8 381 aa30.48■■■□□ 2.47
CLIC4-204ENST00000497755 PELP1Q8IZL8 1130 aaKnown RBP30.47■■■□□ 2.47
CLIC4-204ENST00000497755 MSH5O43196 834 aa30.46■■■□□ 2.47
CLIC4-204ENST00000497755 TATP17735 454 aaPredicted RBP30.46■■■□□ 2.47
CLIC4-204ENST00000497755 INSRP06213 1382 aa30.44■■■□□ 2.46
CLIC4-204ENST00000497755 SMG6Q86US8 1419 aaKnown RBP30.44■■■□□ 2.46
CLIC4-204ENST00000497755 SENP3-EIF4A1A0A087X0R7 540 aa30.4■■■□□ 2.46
CLIC4-204ENST00000497755 PCDH11XQ9BZA7 1347 aa30.4■■■□□ 2.46
CLIC4-204ENST00000497755 PCDH11YQ9BZA8 1340 aa30.4■■■□□ 2.46
CLIC4-204ENST00000497755 CYP27B1O15528 508 aa30.39■■■□□ 2.46
CLIC4-204ENST00000497755 YBX3P16989 372 aaKnown RBP eCLIP30.39■■■□□ 2.46
CLIC4-204ENST00000497755 MSL1Q68DK7 614 aa30.39■■■□□ 2.46
CLIC4-204ENST00000497755 CARD14Q9BXL6 1004 aa30.39■■■□□ 2.46
CLIC4-204ENST00000497755 FLT4P35916 1363 aa30.39■■■□□ 2.45
CLIC4-204ENST00000497755 MPRIPQ6WCQ1 1025 aa30.38■■■□□ 2.45
CLIC4-204ENST00000497755 KIF24Q5T7B8 1368 aa30.38■■■□□ 2.45
CLIC4-204ENST00000497755 GRIN3BO60391 1043 aa30.36■■■□□ 2.45
CLIC4-204ENST00000497755 CDCA8Q53HL2 280 aa30.36■■■□□ 2.45
CLIC4-204ENST00000497755 PALLDQ8WX93 1383 aa30.36■■■□□ 2.45
CLIC4-204ENST00000497755 C5P01031 1676 aa30.35■■■□□ 2.45
CLIC4-204ENST00000497755 KIF20BQ96Q89 1820 aa30.34■■■□□ 2.45
CLIC4-204ENST00000497755 HMGB2P26583 209 aaKnown RBP30.34■■■□□ 2.45
CLIC4-204ENST00000497755 FLAD1Q8NFF5 587 aa30.34■■■□□ 2.45
CLIC4-204ENST00000497755 EMILIN1Q9Y6C2 1016 aa30.34■■■□□ 2.45
CLIC4-204ENST00000497755 TAF1LQ8IZX4 1826 aa30.33■■■□□ 2.45
CLIC4-204ENST00000497755 GIGYF1O75420 1035 aaPredicted RBP30.32■■■□□ 2.44
CLIC4-204ENST00000497755 CD2APQ9Y5K6 639 aa30.31■■■□□ 2.44
CLIC4-204ENST00000497755 SMARCC1Q92922 1105 aaPredicted RBP30.3■■■□□ 2.44
CLIC4-204ENST00000497755 ITGB4P16144 1822 aa30.3■■■□□ 2.44
CLIC4-204ENST00000497755 AMIGO3Q86WK7 504 aa30.29■■■□□ 2.44
CLIC4-204ENST00000497755 PIGBQ92521 554 aa30.29■■■□□ 2.44
CLIC4-204ENST00000497755 NKX1-1Q15270 411 aaPredicted RBP30.28■■■□□ 2.44
CLIC4-204ENST00000497755 TOGARAM1Q9Y4F4 1720 aa30.27■■■□□ 2.44
CLIC4-204ENST00000497755 PPM1GO15355 546 aaPredicted RBP30.26■■■□□ 2.43
CLIC4-204ENST00000497755 NSD3Q9BZ95 1437 aa30.26■■■□□ 2.43
CLIC4-204ENST00000497755 NCAPD2Q15021 1401 aa30.25■■■□□ 2.43
CLIC4-204ENST00000497755 SMIM5Q71RC9 77 aa30.25■■■□□ 2.43
CLIC4-204ENST00000497755 AK7Q96M32 723 aa30.25■■■□□ 2.43
CLIC4-204ENST00000497755 C4BP0C0L5 1744 aa30.25■■■□□ 2.43
CLIC4-204ENST00000497755 PKD1L3Q7Z443 1732 aa30.25■■■□□ 2.43
CLIC4-204ENST00000497755 SPG7Q9UQ90 795 aa30.24■■■□□ 2.43
CLIC4-204ENST00000497755 WASHC2AQ641Q2 1341 aa30.23■■■□□ 2.43
CLIC4-204ENST00000497755 EYA1Q99502 592 aa30.22■■■□□ 2.43
CLIC4-204ENST00000497755 CEP350Q5VT06 3117 aa30.22■■■□□ 2.43
CLIC4-204ENST00000497755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.2■■■□□ 2.43
CLIC4-204ENST00000497755 PHF14O94880 888 aa30.2■■■□□ 2.43
CLIC4-204ENST00000497755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.2■■■□□ 2.43
CLIC4-204ENST00000497755 UBR3Q6ZT12 1888 aa30.19■■■□□ 2.42
CLIC4-204ENST00000497755 LOC102724428A0A0B4J2F2 783 aa30.19■■■□□ 2.42
CLIC4-204ENST00000497755 SIK1P57059 783 aa30.19■■■□□ 2.42
CLIC4-204ENST00000497755 MAP2P11137 1827 aaKnown RBP30.19■■■□□ 2.42
CLIC4-204ENST00000497755 LINC00116Q8NCU8 138 aa30.18■■■□□ 2.42
CLIC4-204ENST00000497755 POLKQ9UBT6 870 aa30.17■■■□□ 2.42
CLIC4-204ENST00000497755 ASAP1Q9ULH1 1129 aa30.17■■■□□ 2.42
CLIC4-204ENST00000497755 SSFA2P28290 1259 aa30.16■■■□□ 2.42
CLIC4-204ENST00000497755 ANKRD26Q9UPS8 1709 aa30.16■■■□□ 2.42
CLIC4-204ENST00000497755 ATP10DQ9P241 1426 aa30.15■■■□□ 2.42
CLIC4-204ENST00000497755 TMOD3Q9NYL9 352 aa30.15■■■□□ 2.42
CLIC4-204ENST00000497755 PHKG2P15735 406 aa30.14■■■□□ 2.42
CLIC4-204ENST00000497755 ITPK1Q13572 414 aa30.14■■■□□ 2.42
CLIC4-204ENST00000497755 TRIM26Q12899 539 aaPredicted RBP30.13■■■□□ 2.41
CLIC4-204ENST00000497755 IFNL2Q8IZJ0 200 aa30.13■■■□□ 2.41
CLIC4-204ENST00000497755 IGSF1Q8N6C5 1336 aa30.12■■■□□ 2.41
CLIC4-204ENST00000497755 ATP6V1AP38606 617 aa30.11■■■□□ 2.41
CLIC4-204ENST00000497755 ATG3Q9NT62 314 aa30.11■■■□□ 2.41
CLIC4-204ENST00000497755 WWC3Q9ULE0 1092 aa30.1■■■□□ 2.41
CLIC4-204ENST00000497755 EIF4A2Q14240 407 aaKnown RBP30.09■■■□□ 2.41
CLIC4-204ENST00000497755 ADCY9O60503 1353 aa30.08■■■□□ 2.41
CLIC4-204ENST00000497755 GNPATO15228 680 aa30.08■■■□□ 2.41
CLIC4-204ENST00000497755 GPBP1L1Q9HC44 474 aaPredicted RBP30.08■■■□□ 2.41
CLIC4-204ENST00000497755 TIMELESSQ9UNS1 1208 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms