RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 QSER1Q2KHR3 1735 aa25.1■■□□□ 1.61
ELL3-208ENST00000497700 GGNBP2Q9H3C7 697 aa25.1■■□□□ 1.61
ELL3-208ENST00000497700 LY75O60449 1722 aa25.09■■□□□ 1.61
ELL3-208ENST00000497700 PRIM1P49642 420 aaKnown RBP25.09■■□□□ 1.61
ELL3-208ENST00000497700 USHBP1Q8N6Y0 703 aa25.09■■□□□ 1.61
ELL3-208ENST00000497700 AKT1S1Q96B36 256 aa25.09■■□□□ 1.61
ELL3-208ENST00000497700 ARXQ96QS3 562 aa25.09■■□□□ 1.61
ELL3-208ENST00000497700 NSD2O96028 1365 aa25.08■■□□□ 1.61
ELL3-208ENST00000497700 KIF20BQ96Q89 1820 aa25.08■■□□□ 1.61
ELL3-208ENST00000497700 UTRNP46939 3433 aa25.06■■□□□ 1.6
ELL3-208ENST00000497700 NBPF6Q5VWK0 638 aa25.06■■□□□ 1.6
ELL3-208ENST00000497700 NBPF4Q96M43 638 aa25.06■■□□□ 1.6
ELL3-208ENST00000497700 CHD4Q14839 1912 aa25.06■■□□□ 1.6
ELL3-208ENST00000497700 USP47Q96K76 1375 aa25.05■■□□□ 1.6
ELL3-208ENST00000497700 FYB1O15117 783 aa25.05■■□□□ 1.6
ELL3-208ENST00000497700 ZCRB1Q8TBF4 217 aaKnown RBP25.05■■□□□ 1.6
ELL3-208ENST00000497700 PNPLA7Q6ZV29 1317 aa25.05■■□□□ 1.6
ELL3-208ENST00000497700 KLHL34Q8N239 644 aa25.04■■□□□ 1.6
ELL3-208ENST00000497700 SLC27A3Q5K4L6 730 aa25.03■■□□□ 1.6
ELL3-208ENST00000497700 RTL1A6NKG5 1358 aa25.03■■□□□ 1.6
ELL3-208ENST00000497700 COL24A1Q17RW2 1714 aa25.03■■□□□ 1.6
ELL3-208ENST00000497700 TMF1P82094 1093 aa25.01■■□□□ 1.59
ELL3-208ENST00000497700 ZNF784Q8NCA9 323 aaPredicted RBP25■■□□□ 1.59
ELL3-208ENST00000497700 TFCP2L1Q9NZI6 479 aa25■■□□□ 1.59
ELL3-208ENST00000497700 MAP3K5Q99683 1374 aa24.99■■□□□ 1.59
ELL3-208ENST00000497700 HSP90AB2PQ58FF8 381 aa24.98■■□□□ 1.59
ELL3-208ENST00000497700 CCNL1Q9UK58 526 aaPredicted RBP24.97■■□□□ 1.59
ELL3-208ENST00000497700 SMG6Q86US8 1419 aaKnown RBP24.96■■□□□ 1.59
ELL3-208ENST00000497700 SLC24A1O60721 1099 aa24.96■■□□□ 1.59
ELL3-208ENST00000497700 TOGARAM1Q9Y4F4 1720 aa24.95■■□□□ 1.59
ELL3-208ENST00000497700 SLC16A10Q8TF71 515 aa24.95■■□□□ 1.58
ELL3-208ENST00000497700 RAPGEF4Q8WZA2 1011 aa24.95■■□□□ 1.58
ELL3-208ENST00000497700 C5P01031 1676 aa24.94■■□□□ 1.58
ELL3-208ENST00000497700 INSRP06213 1382 aa24.93■■□□□ 1.58
ELL3-208ENST00000497700 POLD1P28340 1107 aa24.93■■□□□ 1.58
ELL3-208ENST00000497700 NLGN2Q8NFZ4 835 aa24.93■■□□□ 1.58
ELL3-208ENST00000497700 CARD14Q9BXL6 1004 aa24.93■■□□□ 1.58
ELL3-208ENST00000497700 ITGB4P16144 1822 aa24.93■■□□□ 1.58
ELL3-208ENST00000497700 TAF1LQ8IZX4 1826 aa24.92■■□□□ 1.58
ELL3-208ENST00000497700 TATP17735 454 aaPredicted RBP24.92■■□□□ 1.58
ELL3-208ENST00000497700 GPR162Q16538 588 aa24.92■■□□□ 1.58
ELL3-208ENST00000497700 PELP1Q8IZL8 1130 aaKnown RBP24.92■■□□□ 1.58
ELL3-208ENST00000497700 EMILIN1Q9Y6C2 1016 aa24.92■■□□□ 1.58
ELL3-208ENST00000497700 NSD3Q9BZ95 1437 aa24.92■■□□□ 1.58
ELL3-208ENST00000497700 FLT4P35916 1363 aa24.92■■□□□ 1.58
ELL3-208ENST00000497700 MSH5O43196 834 aa24.91■■□□□ 1.58
ELL3-208ENST00000497700 MSL1Q68DK7 614 aa24.9■■□□□ 1.58
ELL3-208ENST00000497700 COL23A1Q86Y22 540 aaPredicted RBP24.9■■□□□ 1.58
ELL3-208ENST00000497700 CGNL1Q0VF96 1302 aa24.89■■□□□ 1.58
ELL3-208ENST00000497700 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.57
ELL3-208ENST00000497700 PCDH11XQ9BZA7 1347 aa24.88■■□□□ 1.57
ELL3-208ENST00000497700 PCDH11YQ9BZA8 1340 aa24.88■■□□□ 1.57
ELL3-208ENST00000497700 CYP27B1O15528 508 aa24.88■■□□□ 1.57
ELL3-208ENST00000497700 ANKRD26Q9UPS8 1709 aa24.87■■□□□ 1.57
ELL3-208ENST00000497700 GOLGB1Q14789 3259 aaKnown RBP24.87■■□□□ 1.57
ELL3-208ENST00000497700 MAP2P11137 1827 aaKnown RBP24.86■■□□□ 1.57
ELL3-208ENST00000497700 PALLDQ8WX93 1383 aa24.86■■□□□ 1.57
ELL3-208ENST00000497700 MPRIPQ6WCQ1 1025 aa24.86■■□□□ 1.57
ELL3-208ENST00000497700 PPM1GO15355 546 aaPredicted RBP24.85■■□□□ 1.57
ELL3-208ENST00000497700 CDCA8Q53HL2 280 aa24.84■■□□□ 1.57
ELL3-208ENST00000497700 KIF24Q5T7B8 1368 aa24.83■■□□□ 1.57
ELL3-208ENST00000497700 SMIM5Q71RC9 77 aa24.83■■□□□ 1.57
ELL3-208ENST00000497700 C4BP0C0L5 1744 aa24.83■■□□□ 1.57
ELL3-208ENST00000497700 AMIGO3Q86WK7 504 aa24.82■■□□□ 1.56
ELL3-208ENST00000497700 YBX3P16989 372 aaKnown RBP eCLIP24.81■■□□□ 1.56
ELL3-208ENST00000497700 NCAPD2Q15021 1401 aa24.8■■□□□ 1.56
ELL3-208ENST00000497700 UBR3Q6ZT12 1888 aa24.79■■□□□ 1.56
ELL3-208ENST00000497700 POLR3GLQ9BT43 218 aa24.79■■□□□ 1.56
ELL3-208ENST00000497700 PIGBQ92521 554 aa24.77■■□□□ 1.56
ELL3-208ENST00000497700 EYA1Q99502 592 aa24.76■■□□□ 1.55
ELL3-208ENST00000497700 PHF14O94880 888 aa24.75■■□□□ 1.55
ELL3-208ENST00000497700 C1QTNF8P60827 252 aa24.75■■□□□ 1.55
ELL3-208ENST00000497700 SENP3-EIF4A1A0A087X0R7 540 aa24.74■■□□□ 1.55
ELL3-208ENST00000497700 TNNT2P45379 298 aaPredicted RBP24.74■■□□□ 1.55
ELL3-208ENST00000497700 WASHC2AQ641Q2 1341 aa24.74■■□□□ 1.55
ELL3-208ENST00000497700 AK7Q96M32 723 aa24.73■■□□□ 1.55
ELL3-208ENST00000497700 POLKQ9UBT6 870 aa24.73■■□□□ 1.55
ELL3-208ENST00000497700 SMARCC1Q92922 1105 aaPredicted RBP24.72■■□□□ 1.55
ELL3-208ENST00000497700 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
ELL3-208ENST00000497700 NKX1-1Q15270 411 aaPredicted RBP24.71■■□□□ 1.55
ELL3-208ENST00000497700 LINC00116Q8NCU8 138 aa24.71■■□□□ 1.55
ELL3-208ENST00000497700 WWC3Q9ULE0 1092 aa24.71■■□□□ 1.55
ELL3-208ENST00000497700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.69■■□□□ 1.54
ELL3-208ENST00000497700 FLAD1Q8NFF5 587 aa24.69■■□□□ 1.54
ELL3-208ENST00000497700 ASAP1Q9ULH1 1129 aa24.69■■□□□ 1.54
ELL3-208ENST00000497700 LOC102724428A0A0B4J2F2 783 aa24.68■■□□□ 1.54
ELL3-208ENST00000497700 SIK1P57059 783 aa24.68■■□□□ 1.54
ELL3-208ENST00000497700 ITPK1Q13572 414 aa24.68■■□□□ 1.54
ELL3-208ENST00000497700 EIF4A2Q14240 407 aaKnown RBP24.68■■□□□ 1.54
ELL3-208ENST00000497700 TMOD3Q9NYL9 352 aa24.68■■□□□ 1.54
ELL3-208ENST00000497700 GIGYF1O75420 1035 aaPredicted RBP24.67■■□□□ 1.54
ELL3-208ENST00000497700 PHKG2P15735 406 aa24.67■■□□□ 1.54
ELL3-208ENST00000497700 GRIN3BO60391 1043 aa24.66■■□□□ 1.54
ELL3-208ENST00000497700 CD2APQ9Y5K6 639 aa24.66■■□□□ 1.54
ELL3-208ENST00000497700 IFNL2Q8IZJ0 200 aa24.64■■□□□ 1.54
ELL3-208ENST00000497700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.64■■□□□ 1.54
ELL3-208ENST00000497700 ZNF316A6NFI3 1004 aaPredicted RBP24.63■■□□□ 1.53
ELL3-208ENST00000497700 GNPATO15228 680 aa24.63■■□□□ 1.53
ELL3-208ENST00000497700 ATP10DQ9P241 1426 aa24.62■■□□□ 1.53
ELL3-208ENST00000497700 ATP6V1AP38606 617 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms