RNA–Protein interactions for RNA: ENST00000497697.5

SMTN-220, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-220ENST00000497697 ANO8Q9HCE9 1232 aaPredicted RBP28.84■■■□□ 2.21
SMTN-220ENST00000497697 MAP2P11137 1827 aaKnown RBP28.84■■■□□ 2.21
SMTN-220ENST00000497697 SHANK3Q9BYB0 1731 aa28.83■■■□□ 2.21
SMTN-220ENST00000497697 TNNT2P45379 298 aaPredicted RBP28.83■■■□□ 2.21
SMTN-220ENST00000497697 TXNRD1Q16881 649 aa28.83■■■□□ 2.21
SMTN-220ENST00000497697 KAT6BQ8WYB5 2073 aa28.82■■■□□ 2.2
SMTN-220ENST00000497697 KIF7Q2M1P5 1343 aa28.82■■■□□ 2.2
SMTN-220ENST00000497697 WASHC2AQ641Q2 1341 aa28.82■■■□□ 2.2
SMTN-220ENST00000497697 RAPGEF4Q8WZA2 1011 aa28.81■■■□□ 2.2
SMTN-220ENST00000497697 BTAF1O14981 1849 aa28.8■■■□□ 2.2
SMTN-220ENST00000497697 TATP17735 454 aaPredicted RBP28.79■■■□□ 2.2
SMTN-220ENST00000497697 NSD2O96028 1365 aa28.75■■■□□ 2.19
SMTN-220ENST00000497697 PRIM1P49642 420 aaKnown RBP28.75■■■□□ 2.19
SMTN-220ENST00000497697 NCAPD2Q15021 1401 aa28.75■■■□□ 2.19
SMTN-220ENST00000497697 EYA1Q99502 592 aa28.74■■■□□ 2.19
SMTN-220ENST00000497697 DOT1LQ8TEK3 1739 aa28.73■■■□□ 2.19
SMTN-220ENST00000497697 SYTL4Q96C24 671 aaPredicted RBP28.73■■■□□ 2.19
SMTN-220ENST00000497697 KNSTRNQ9Y448 316 aa28.73■■■□□ 2.19
SMTN-220ENST00000497697 EIF4A2Q14240 407 aaKnown RBP28.71■■■□□ 2.19
SMTN-220ENST00000497697 MORC1Q86VD1 984 aa28.71■■■□□ 2.19
SMTN-220ENST00000497697 PDGFDQ9GZP0 370 aaPredicted RBP28.71■■■□□ 2.19
SMTN-220ENST00000497697 LRRC4BQ9NT99 713 aa28.69■■■□□ 2.18
SMTN-220ENST00000497697 STK32BQ9NY57 414 aa28.69■■■□□ 2.18
SMTN-220ENST00000497697 PCDH11XQ9BZA7 1347 aa28.69■■■□□ 2.18
SMTN-220ENST00000497697 PCDH11YQ9BZA8 1340 aa28.69■■■□□ 2.18
SMTN-220ENST00000497697 CYP27B1O15528 508 aa28.68■■■□□ 2.18
SMTN-220ENST00000497697 SLC15A2Q16348 729 aa28.68■■■□□ 2.18
SMTN-220ENST00000497697 AMER1Q5JTC6 1135 aaPredicted RBP28.68■■■□□ 2.18
SMTN-220ENST00000497697 CASZ1Q86V15 1759 aa28.66■■■□□ 2.18
SMTN-220ENST00000497697 PAPPAQ13219 1627 aa28.65■■■□□ 2.18
SMTN-220ENST00000497697 PKD1L3Q7Z443 1732 aa28.65■■■□□ 2.18
SMTN-220ENST00000497697 PER1O15534 1290 aaPredicted RBP28.64■■■□□ 2.18
SMTN-220ENST00000497697 SPON1Q9HCB6 807 aa28.64■■■□□ 2.18
SMTN-220ENST00000497697 KCNQ4P56696 695 aa28.62■■■□□ 2.17
SMTN-220ENST00000497697 ZNF827Q17R98 1081 aa28.61■■■□□ 2.17
SMTN-220ENST00000497697 IGSF1Q8N6C5 1336 aa28.61■■■□□ 2.17
SMTN-220ENST00000497697 SLC27A3Q5K4L6 730 aa28.6■■■□□ 2.17
SMTN-220ENST00000497697 SPG7Q9UQ90 795 aa28.6■■■□□ 2.17
SMTN-220ENST00000497697 ZBTB7AO95365 584 aa28.59■■■□□ 2.17
SMTN-220ENST00000497697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.58■■■□□ 2.17
SMTN-220ENST00000497697 LY75O60449 1722 aa28.57■■■□□ 2.16
SMTN-220ENST00000497697 TOGARAM1Q9Y4F4 1720 aa28.57■■■□□ 2.16
SMTN-220ENST00000497697 NKX1-1Q15270 411 aaPredicted RBP28.57■■■□□ 2.16
SMTN-220ENST00000497697 AKT1S1Q96B36 256 aa28.57■■■□□ 2.16
SMTN-220ENST00000497697 MPRIPQ6WCQ1 1025 aa28.55■■■□□ 2.16
SMTN-220ENST00000497697 CC2D1BQ5T0F9 858 aaKnown RBP28.54■■■□□ 2.16
SMTN-220ENST00000497697 ATF5Q9Y2D1 282 aaPredicted RBP28.54■■■□□ 2.16
SMTN-220ENST00000497697 PHKG2P15735 406 aa28.53■■■□□ 2.16
SMTN-220ENST00000497697 CCNL1Q9UK58 526 aaPredicted RBP28.53■■■□□ 2.16
SMTN-220ENST00000497697 ITGB4P16144 1822 aa28.53■■■□□ 2.16
SMTN-220ENST00000497697 IL13P35225 146 aa28.51■■■□□ 2.15
SMTN-220ENST00000497697 PTGER2P43116 358 aa28.51■■■□□ 2.15
SMTN-220ENST00000497697 AEBP1Q8IUX7 1158 aa28.51■■■□□ 2.15
SMTN-220ENST00000497697 IFNL2Q8IZJ0 200 aa28.51■■■□□ 2.15
SMTN-220ENST00000497697 PPP1R1BQ9UD71 204 aaPredicted RBP28.51■■■□□ 2.15
SMTN-220ENST00000497697 MTHFSP49914 203 aa28.5■■■□□ 2.15
SMTN-220ENST00000497697 PIGBQ92521 554 aa28.5■■■□□ 2.15
SMTN-220ENST00000497697 PALLDQ8WX93 1383 aa28.49■■■□□ 2.15
SMTN-220ENST00000497697 PLEKHG2Q9H7P9 1386 aa28.49■■■□□ 2.15
SMTN-220ENST00000497697 MTFR1LQ9H019 292 aa28.48■■■□□ 2.15
SMTN-220ENST00000497697 CNGB1Q14028 1251 aaPredicted RBP28.47■■■□□ 2.15
SMTN-220ENST00000497697 PNPLA7Q6ZV29 1317 aa28.46■■■□□ 2.15
SMTN-220ENST00000497697 SULT6B1Q6IMI4 303 aa28.46■■■□□ 2.15
SMTN-220ENST00000497697 NPC1L1Q9UHC9 1359 aa28.46■■■□□ 2.15
SMTN-220ENST00000497697 PLEKHO1Q53GL0 409 aaPredicted RBP28.45■■■□□ 2.14
SMTN-220ENST00000497697 SGIP1Q9BQI5 828 aa28.45■■■□□ 2.14
SMTN-220ENST00000497697 TFCP2L1Q9NZI6 479 aa28.45■■■□□ 2.14
SMTN-220ENST00000497697 TUBGCP6Q96RT7 1819 aa28.45■■■□□ 2.14
SMTN-220ENST00000497697 QSER1Q2KHR3 1735 aa28.43■■■□□ 2.14
SMTN-220ENST00000497697 SMARCC1Q92922 1105 aaPredicted RBP28.43■■■□□ 2.14
SMTN-220ENST00000497697 TMOD3Q9NYL9 352 aa28.43■■■□□ 2.14
SMTN-220ENST00000497697 KDRP35968 1356 aa28.42■■■□□ 2.14
SMTN-220ENST00000497697 ZNF530Q6P9A1 599 aaPredicted RBP28.42■■■□□ 2.14
SMTN-220ENST00000497697 AMOTQ4VCS5 1084 aa28.41■■■□□ 2.14
SMTN-220ENST00000497697 ASAP1Q9ULH1 1129 aa28.4■■■□□ 2.14
SMTN-220ENST00000497697 C5P01031 1676 aa28.39■■■□□ 2.14
SMTN-220ENST00000497697 TAF1LQ8IZX4 1826 aa28.38■■■□□ 2.13
SMTN-220ENST00000497697 KDM6AO15550 1401 aaPredicted RBP28.37■■■□□ 2.13
SMTN-220ENST00000497697 SLC16A10Q8TF71 515 aa28.37■■■□□ 2.13
SMTN-220ENST00000497697 DCAF5Q96JK2 942 aa28.37■■■□□ 2.13
SMTN-220ENST00000497697 HSP90AB1P08238 724 aaKnown RBP28.36■■■□□ 2.13
SMTN-220ENST00000497697 ATG3Q9NT62 314 aa28.36■■■□□ 2.13
SMTN-220ENST00000497697 LOC102724428A0A0B4J2F2 783 aa28.35■■■□□ 2.13
SMTN-220ENST00000497697 ERVV-2B6SEH9 535 aa28.35■■■□□ 2.13
SMTN-220ENST00000497697 DIAPH1O60610 1272 aaKnown RBP28.35■■■□□ 2.13
SMTN-220ENST00000497697 HMOX1P09601 288 aa28.35■■■□□ 2.13
SMTN-220ENST00000497697 SIK1P57059 783 aa28.35■■■□□ 2.13
SMTN-220ENST00000497697 COL23A1Q86Y22 540 aaPredicted RBP28.35■■■□□ 2.13
SMTN-220ENST00000497697 C1orf141Q5JVX7 400 aa28.33■■■□□ 2.13
SMTN-220ENST00000497697 FHDC1Q9C0D6 1143 aaPredicted RBP28.33■■■□□ 2.13
SMTN-220ENST00000497697 COL3A1P02461 1466 aaPredicted RBP28.33■■■□□ 2.13
SMTN-220ENST00000497697 ARXQ96QS3 562 aa28.32■■■□□ 2.12
SMTN-220ENST00000497697 C4BP0C0L5 1744 aa28.32■■■□□ 2.12
SMTN-220ENST00000497697 AMIGO3Q86WK7 504 aa28.31■■■□□ 2.12
SMTN-220ENST00000497697 LINC00116Q8NCU8 138 aa28.31■■■□□ 2.12
SMTN-220ENST00000497697 COL24A1Q17RW2 1714 aa28.3■■■□□ 2.12
SMTN-220ENST00000497697 MSH5O43196 834 aa28.3■■■□□ 2.12
SMTN-220ENST00000497697 ITPK1Q13572 414 aa28.3■■■□□ 2.12
SMTN-220ENST00000497697 HMGB2P26583 209 aaKnown RBP28.29■■■□□ 2.12
SMTN-220ENST00000497697 CABP4P57796 275 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms