RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-208ENST00000497382 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
VIT-208ENST00000497382 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
VIT-208ENST00000497382 EXOC5O00471 708 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 CFAP65Q6ZU64 1925 aaKnown RBP11.73□□□□□ -0.53
VIT-208ENST00000497382 UGGT1Q9NYU2 1555 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 IGSF5Q9NSI5 407 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 STRCP1A6NGW2 1772 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 PAX7P23759 505 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 LRCH2Q5VUJ6 765 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 VTI1AQ96AJ9 217 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 UBA5Q9GZZ9 404 aa11.73□□□□□ -0.53
VIT-208ENST00000497382 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
VIT-208ENST00000497382 ZRANB2O95218 330 aaKnown RBP eCLIP11.72□□□□□ -0.53
VIT-208ENST00000497382 LIG1P18858 919 aa11.72□□□□□ -0.53
VIT-208ENST00000497382 GGT6Q6P531 493 aa11.72□□□□□ -0.53
VIT-208ENST00000497382 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
VIT-208ENST00000497382 NAT1P18440 290 aa11.72□□□□□ -0.53
VIT-208ENST00000497382 ZNF771Q7L3S4 317 aaPredicted RBP11.72□□□□□ -0.53
VIT-208ENST00000497382 TMX4Q9H1E5 349 aaPredicted RBP11.72□□□□□ -0.53
VIT-208ENST00000497382 CTDP1Q9Y5B0 961 aaPredicted RBP11.72□□□□□ -0.53
VIT-208ENST00000497382 MFSD4BQ5TF39 518 aa11.71□□□□□ -0.53
VIT-208ENST00000497382 RPAINQ86UA6 219 aa11.71□□□□□ -0.53
VIT-208ENST00000497382 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
VIT-208ENST00000497382 MIA2Q96PC5 1412 aa11.71□□□□□ -0.53
VIT-208ENST00000497382 FYCO1Q9BQS8 1478 aa11.71□□□□□ -0.53
VIT-208ENST00000497382 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.54
VIT-208ENST00000497382 DHX29Q7Z478 1369 aaKnown RBP11.71□□□□□ -0.54
VIT-208ENST00000497382 MCCD1P59942 119 aaPredicted RBP11.71□□□□□ -0.54
VIT-208ENST00000497382 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.54
VIT-208ENST00000497382 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
VIT-208ENST00000497382 BIRC2Q13490 618 aa11.7□□□□□ -0.54
VIT-208ENST00000497382 SLC26A8Q96RN1 970 aa11.7□□□□□ -0.54
VIT-208ENST00000497382 NUCKS1Q9H1E3 243 aaKnown RBP11.7□□□□□ -0.54
VIT-208ENST00000497382 CALCOCO1Q9P1Z2 691 aa11.7□□□□□ -0.54
VIT-208ENST00000497382 KLHL42Q9P2K6 505 aa11.7□□□□□ -0.54
VIT-208ENST00000497382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.7□□□□□ -0.54
VIT-208ENST00000497382 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
VIT-208ENST00000497382 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
VIT-208ENST00000497382 TPM3P06753 285 aa11.69□□□□□ -0.54
VIT-208ENST00000497382 STK10O94804 968 aaKnown RBP11.69□□□□□ -0.54
VIT-208ENST00000497382 NOP2P46087 812 aaKnown RBP11.69□□□□□ -0.54
VIT-208ENST00000497382 CD151P48509 253 aa11.69□□□□□ -0.54
VIT-208ENST00000497382 MAGEC2Q9UBF1 373 aaPredicted RBP11.69□□□□□ -0.54
VIT-208ENST00000497382 SMAPO00193 183 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 KANK4Q5T7N3 995 aaPredicted RBP11.68□□□□□ -0.54
VIT-208ENST00000497382 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 NEFHP12036 1026 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 GUCY2CP25092 1073 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 APLP1P51693 650 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
VIT-208ENST00000497382 CBX1P83916 185 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 C11orf91Q3C1V1 193 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 ICE2Q659A1 982 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 ARPC5LQ9BPX5 153 aa11.68□□□□□ -0.54
VIT-208ENST00000497382 PES1O00541 588 aaKnown RBP11.67□□□□□ -0.54
VIT-208ENST00000497382 NAP1L1P55209 391 aaKnown RBP11.67□□□□□ -0.54
VIT-208ENST00000497382 ZBED9Q6R2W3 1325 aa11.67□□□□□ -0.54
VIT-208ENST00000497382 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
VIT-208ENST00000497382 PMM1Q92871 262 aa11.67□□□□□ -0.54
VIT-208ENST00000497382 METTL14Q9HCE5 456 aaKnown RBP11.67□□□□□ -0.54
VIT-208ENST00000497382 PUF60Q9UHX1 559 aaKnown RBP11.67□□□□□ -0.54
VIT-208ENST00000497382 KCNA1Q09470 495 aa11.66□□□□□ -0.54
VIT-208ENST00000497382 MAF1Q9H063 256 aa11.66□□□□□ -0.54
VIT-208ENST00000497382 ZNF777Q9ULD5 760 aaPredicted RBP11.66□□□□□ -0.54
VIT-208ENST00000497382 XIRP1Q702N8 1843 aaKnown RBP11.66□□□□□ -0.54
VIT-208ENST00000497382 UQCRHLA0A096LP55 91 aa11.66□□□□□ -0.54
VIT-208ENST00000497382 UQCRHP07919 91 aa11.66□□□□□ -0.54
VIT-208ENST00000497382 MICALL1Q8N3F8 863 aa11.66□□□□□ -0.54
VIT-208ENST00000497382 IRF2BPLQ9H1B7 796 aa11.66□□□□□ -0.54
VIT-208ENST00000497382 RANBP17Q9H2T7 1088 aaKnown RBP11.66□□□□□ -0.54
VIT-208ENST00000497382 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
VIT-208ENST00000497382 ERBB4Q15303 1308 aa11.65□□□□□ -0.54
VIT-208ENST00000497382 DNAJC21Q5F1R6 531 aaKnown RBP11.65□□□□□ -0.54
VIT-208ENST00000497382 POTEAQ6S8J7 498 aa11.65□□□□□ -0.54
VIT-208ENST00000497382 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
VIT-208ENST00000497382 SUFUQ9UMX1 484 aa11.65□□□□□ -0.54
VIT-208ENST00000497382 PAXBP1Q9Y5B6 917 aa11.65□□□□□ -0.54
VIT-208ENST00000497382 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.54
VIT-208ENST00000497382 BDNFP23560 247 aa11.65□□□□□ -0.54
VIT-208ENST00000497382 SYNPO2Q9UMS6 1093 aa11.65□□□□□ -0.54
VIT-208ENST00000497382 FSD2A1L4K1 749 aa11.64□□□□□ -0.55
VIT-208ENST00000497382 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
VIT-208ENST00000497382 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
VIT-208ENST00000497382 TTC30BQ8N4P2 665 aa11.64□□□□□ -0.55
VIT-208ENST00000497382 NOL10Q9BSC4 688 aaKnown RBP11.64□□□□□ -0.55
VIT-208ENST00000497382 MBD5Q9P267 1494 aa11.64□□□□□ -0.55
VIT-208ENST00000497382 SPOCK3Q9BQ16 436 aa11.64□□□□□ -0.55
VIT-208ENST00000497382 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
VIT-208ENST00000497382 SCAF11Q99590 1463 aaKnown RBP11.64□□□□□ -0.55
VIT-208ENST00000497382 FAM200BP0CF97 657 aa11.63□□□□□ -0.55
VIT-208ENST00000497382 ABCD1P33897 745 aa11.63□□□□□ -0.55
VIT-208ENST00000497382 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
VIT-208ENST00000497382 ERCC4Q92889 916 aaPredicted RBP11.63□□□□□ -0.55
VIT-208ENST00000497382 PHF8Q9UPP1 1060 aa11.63□□□□□ -0.55
VIT-208ENST00000497382 GABPB1Q06547 395 aaPredicted RBP11.63□□□□□ -0.55
VIT-208ENST00000497382 SLIT1O75093 1534 aa11.63□□□□□ -0.55
VIT-208ENST00000497382 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
VIT-208ENST00000497382 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
VIT-208ENST00000497382 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms