RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 CDK15Q96Q40 435 aa10.19□□□□□ -0.78
MSH5-219ENST00000497269 RUSC2Q8N2Y8 1516 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 FAM187AA6NFU0 413 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 NR3C2P08235 984 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 GRM5P41594 1212 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 NNTQ13423 1086 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 CCDC82Q8N4S0 544 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 TOR4AQ9NXH8 423 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 CDV3Q9UKY7 258 aaKnown RBP10.18□□□□□ -0.78
MSH5-219ENST00000497269 MAP4K5Q9Y4K4 846 aa10.18□□□□□ -0.78
MSH5-219ENST00000497269 SKIP12755 728 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 PRR20EP86478 221 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 PRR20CP86479 221 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 PRR20DP86480 221 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 PRR20BP86481 221 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 PRR20AP86496 221 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 UCN2Q96RP3 112 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 TMPRSS4Q9NRS4 437 aa10.17□□□□□ -0.78
MSH5-219ENST00000497269 KIF27Q86VH2 1401 aa10.16□□□□□ -0.78
MSH5-219ENST00000497269 SMPD1P17405 629 aa10.16□□□□□ -0.78
MSH5-219ENST00000497269 MCCD1P59942 119 aaPredicted RBP10.16□□□□□ -0.78
MSH5-219ENST00000497269 TSGA10IPQ3SY00 556 aa10.16□□□□□ -0.78
MSH5-219ENST00000497269 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
MSH5-219ENST00000497269 CCDC97Q96F63 343 aaPredicted RBP10.16□□□□□ -0.78
MSH5-219ENST00000497269 PCDHB11Q9Y5F2 797 aa10.16□□□□□ -0.78
MSH5-219ENST00000497269 TSPOAP1O95153 1857 aa10.16□□□□□ -0.78
MSH5-219ENST00000497269 DEPDC4Q8N2C3 294 aa10.15□□□□□ -0.78
MSH5-219ENST00000497269 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.79
MSH5-219ENST00000497269 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
MSH5-219ENST00000497269 ERVH48-1M5A8F1 160 aa10.14□□□□□ -0.79
MSH5-219ENST00000497269 RFX1P22670 979 aa10.14□□□□□ -0.79
MSH5-219ENST00000497269 OXLD1Q5BKU9 147 aa10.14□□□□□ -0.79
MSH5-219ENST00000497269 CCDC116Q8IYX3 515 aa10.14□□□□□ -0.79
MSH5-219ENST00000497269 HPS1Q92902 700 aa10.14□□□□□ -0.79
MSH5-219ENST00000497269 CCDC85AQ96PX6 553 aaPredicted RBP10.14□□□□□ -0.79
MSH5-219ENST00000497269 KIAA0586Q9BVV6 1533 aa10.13□□□□□ -0.79
MSH5-219ENST00000497269 ESPNB1AK53 854 aa10.13□□□□□ -0.79
MSH5-219ENST00000497269 NR5A1Q13285 461 aa10.13□□□□□ -0.79
MSH5-219ENST00000497269 MPNDQ8N594 471 aa10.13□□□□□ -0.79
MSH5-219ENST00000497269 CDCA7Q9BWT1 371 aaPredicted RBP10.13□□□□□ -0.79
MSH5-219ENST00000497269 TFIP11Q9UBB9 837 aaKnown RBP10.13□□□□□ -0.79
MSH5-219ENST00000497269 DOLKQ9UPQ8 538 aa10.13□□□□□ -0.79
MSH5-219ENST00000497269 PTPRGP23470 1445 aa10.13□□□□□ -0.79
MSH5-219ENST00000497269 ABCC10Q5T3U5 1492 aa10.12□□□□□ -0.79
MSH5-219ENST00000497269 PPP1R26Q5T8A7 1209 aaPredicted RBP10.12□□□□□ -0.79
MSH5-219ENST00000497269 RNF20Q5VTR2 975 aa10.12□□□□□ -0.79
MSH5-219ENST00000497269 PLPP7Q8NBV4 271 aa10.12□□□□□ -0.79
MSH5-219ENST00000497269 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
MSH5-219ENST00000497269 CYLDQ9NQC7 956 aa10.12□□□□□ -0.79
MSH5-219ENST00000497269 PALM3A6NDB9 673 aaPredicted RBP10.11□□□□□ -0.79
MSH5-219ENST00000497269 WDR4P57081 412 aaKnown RBP10.11□□□□□ -0.79
MSH5-219ENST00000497269 PHTF2Q8N3S3 785 aa10.11□□□□□ -0.79
MSH5-219ENST00000497269 PPP1R12CQ9BZL4 782 aa10.11□□□□□ -0.79
MSH5-219ENST00000497269 LMOD1P29536 600 aaPredicted RBP10.1□□□□□ -0.79
MSH5-219ENST00000497269 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
MSH5-219ENST00000497269 ZNF784Q8NCA9 323 aaPredicted RBP10.1□□□□□ -0.79
MSH5-219ENST00000497269 ITPKCQ96DU7 683 aa10.1□□□□□ -0.79
MSH5-219ENST00000497269 ZFAND3Q9H8U3 227 aa10.1□□□□□ -0.79
MSH5-219ENST00000497269 CUL7Q14999 1698 aa10.09□□□□□ -0.79
MSH5-219ENST00000497269 USP17L5A8MUK1 530 aa10.09□□□□□ -0.79
MSH5-219ENST00000497269 ATP9BO43861 1147 aa10.09□□□□□ -0.79
MSH5-219ENST00000497269 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
MSH5-219ENST00000497269 DHX9Q08211 1270 aaKnown RBP10.09□□□□□ -0.79
MSH5-219ENST00000497269 CDCA8Q53HL2 280 aa10.09□□□□□ -0.79
MSH5-219ENST00000497269 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
MSH5-219ENST00000497269 NRG2O14511 850 aaPredicted RBP10.08□□□□□ -0.8
MSH5-219ENST00000497269 SCTRP47872 440 aa10.08□□□□□ -0.8
MSH5-219ENST00000497269 NCOA4Q13772 614 aa10.08□□□□□ -0.8
MSH5-219ENST00000497269 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
MSH5-219ENST00000497269 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
MSH5-219ENST00000497269 TNIKQ9UKE5 1360 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 USP17L3A6NCW0 530 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 USP17L4A6NCW7 530 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 CBLBQ13191 982 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 USP17L1Q7RTZ2 530 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 ESF1Q9H501 851 aaKnown RBP10.07□□□□□ -0.8
MSH5-219ENST00000497269 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 MAFBQ9Y5Q3 323 aaPredicted RBP10.07□□□□□ -0.8
MSH5-219ENST00000497269 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
MSH5-219ENST00000497269 TIMP2P16035 220 aa10.06□□□□□ -0.8
MSH5-219ENST00000497269 CFAP70Q5T0N1 1121 aa10.06□□□□□ -0.8
MSH5-219ENST00000497269 TRAF7Q6Q0C0 670 aa10.06□□□□□ -0.8
MSH5-219ENST00000497269 MAPKBP1O60336 1514 aa10.06□□□□□ -0.8
MSH5-219ENST00000497269 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
MSH5-219ENST00000497269 KDM6BO15054 1643 aa10.05□□□□□ -0.8
MSH5-219ENST00000497269 MYT1Q01538 1121 aa10.05□□□□□ -0.8
MSH5-219ENST00000497269 CAPN5O15484 640 aaPredicted RBP10.04□□□□□ -0.8
MSH5-219ENST00000497269 EML3Q32P44 896 aa10.04□□□□□ -0.8
MSH5-219ENST00000497269 ASXL2Q76L83 1435 aa10.04□□□□□ -0.8
MSH5-219ENST00000497269 IQGAP2Q13576 1575 aa10.04□□□□□ -0.8
MSH5-219ENST00000497269 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
MSH5-219ENST00000497269 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
MSH5-219ENST00000497269 RANGAP1P46060 587 aaPredicted RBP10.03□□□□□ -0.8
MSH5-219ENST00000497269 MAP7D1Q3KQU3 841 aa10.03□□□□□ -0.8
MSH5-219ENST00000497269 CC2D2BQ6DHV5 1058 aa10.03□□□□□ -0.8
MSH5-219ENST00000497269 AGBL1Q96MI9 1066 aa10.03□□□□□ -0.8
MSH5-219ENST00000497269 ST8SIA5O15466 376 aa10.02□□□□□ -0.81
MSH5-219ENST00000497269 LILRA1O75019 489 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms