RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 ARXQ96QS3 562 aa19.01■□□□□ 0.63
SPTAN1-209ENST00000497216 SLC16A10Q8TF71 515 aa19■□□□□ 0.63
SPTAN1-209ENST00000497216 NSD2O96028 1365 aa19■□□□□ 0.63
SPTAN1-209ENST00000497216 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
SPTAN1-209ENST00000497216 CGNL1Q0VF96 1302 aa18.98■□□□□ 0.63
SPTAN1-209ENST00000497216 USP47Q96K76 1375 aa18.97■□□□□ 0.63
SPTAN1-209ENST00000497216 FYB1O15117 783 aa18.97■□□□□ 0.63
SPTAN1-209ENST00000497216 FBLN1P23142 703 aa18.97■□□□□ 0.63
SPTAN1-209ENST00000497216 TAF1LQ8IZX4 1826 aa18.97■□□□□ 0.63
SPTAN1-209ENST00000497216 KIF24Q5T7B8 1368 aa18.96■□□□□ 0.63
SPTAN1-209ENST00000497216 C5P01031 1676 aa18.96■□□□□ 0.63
SPTAN1-209ENST00000497216 PRIM1P49642 420 aaKnown RBP18.96■□□□□ 0.63
SPTAN1-209ENST00000497216 TMF1P82094 1093 aa18.96■□□□□ 0.63
SPTAN1-209ENST00000497216 ANKRD26Q9UPS8 1709 aa18.96■□□□□ 0.63
SPTAN1-209ENST00000497216 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
SPTAN1-209ENST00000497216 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
SPTAN1-209ENST00000497216 PKD1L3Q7Z443 1732 aa18.94■□□□□ 0.62
SPTAN1-209ENST00000497216 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
SPTAN1-209ENST00000497216 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
SPTAN1-209ENST00000497216 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
SPTAN1-209ENST00000497216 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
SPTAN1-209ENST00000497216 ITGB4P16144 1822 aa18.94■□□□□ 0.62
SPTAN1-209ENST00000497216 INSRP06213 1382 aa18.93■□□□□ 0.62
SPTAN1-209ENST00000497216 ZNF784Q8NCA9 323 aaPredicted RBP18.93■□□□□ 0.62
SPTAN1-209ENST00000497216 GGNBP2Q9H3C7 697 aa18.93■□□□□ 0.62
SPTAN1-209ENST00000497216 TOGARAM1Q9Y4F4 1720 aa18.92■□□□□ 0.62
SPTAN1-209ENST00000497216 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
SPTAN1-209ENST00000497216 FLT4P35916 1363 aa18.92■□□□□ 0.62
SPTAN1-209ENST00000497216 POLD1P28340 1107 aa18.91■□□□□ 0.62
SPTAN1-209ENST00000497216 TFCP2L1Q9NZI6 479 aa18.91■□□□□ 0.62
SPTAN1-209ENST00000497216 RAPGEF4Q8WZA2 1011 aa18.9■□□□□ 0.62
SPTAN1-209ENST00000497216 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
SPTAN1-209ENST00000497216 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
SPTAN1-209ENST00000497216 UTRNP46939 3433 aa18.9■□□□□ 0.62
SPTAN1-209ENST00000497216 KCNQ4P56696 695 aa18.89■□□□□ 0.61
SPTAN1-209ENST00000497216 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
SPTAN1-209ENST00000497216 TATP17735 454 aaPredicted RBP18.88■□□□□ 0.61
SPTAN1-209ENST00000497216 USHBP1Q8N6Y0 703 aa18.88■□□□□ 0.61
SPTAN1-209ENST00000497216 PCDH11XQ9BZA7 1347 aa18.88■□□□□ 0.61
SPTAN1-209ENST00000497216 PCDH11YQ9BZA8 1340 aa18.88■□□□□ 0.61
SPTAN1-209ENST00000497216 HSP90AB2PQ58FF8 381 aa18.87■□□□□ 0.61
SPTAN1-209ENST00000497216 HMGB2P26583 209 aaKnown RBP18.86■□□□□ 0.61
SPTAN1-209ENST00000497216 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
SPTAN1-209ENST00000497216 C4BP0C0L5 1744 aa18.85■□□□□ 0.61
SPTAN1-209ENST00000497216 NSD3Q9BZ95 1437 aa18.84■□□□□ 0.61
SPTAN1-209ENST00000497216 GPR162Q16538 588 aa18.84■□□□□ 0.61
SPTAN1-209ENST00000497216 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
SPTAN1-209ENST00000497216 CYP27B1O15528 508 aa18.83■□□□□ 0.6
SPTAN1-209ENST00000497216 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
SPTAN1-209ENST00000497216 COL23A1Q86Y22 540 aaPredicted RBP18.83■□□□□ 0.6
SPTAN1-209ENST00000497216 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
SPTAN1-209ENST00000497216 KLHL34Q8N239 644 aa18.81■□□□□ 0.6
SPTAN1-209ENST00000497216 NLGN2Q8NFZ4 835 aa18.81■□□□□ 0.6
SPTAN1-209ENST00000497216 TIMELESSQ9UNS1 1208 aa18.81■□□□□ 0.6
SPTAN1-209ENST00000497216 EMILIN1Q9Y6C2 1016 aa18.81■□□□□ 0.6
SPTAN1-209ENST00000497216 FLAD1Q8NFF5 587 aa18.8■□□□□ 0.6
SPTAN1-209ENST00000497216 NKX1-1Q15270 411 aaPredicted RBP18.79■□□□□ 0.6
SPTAN1-209ENST00000497216 SMARCC1Q92922 1105 aaPredicted RBP18.79■□□□□ 0.6
SPTAN1-209ENST00000497216 WASHC2AQ641Q2 1341 aa18.78■□□□□ 0.6
SPTAN1-209ENST00000497216 PLEKHG2Q9H7P9 1386 aa18.78■□□□□ 0.6
SPTAN1-209ENST00000497216 MSH5O43196 834 aa18.77■□□□□ 0.6
SPTAN1-209ENST00000497216 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
SPTAN1-209ENST00000497216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.77■□□□□ 0.6
SPTAN1-209ENST00000497216 ZNF831Q5JPB2 1677 aa18.76■□□□□ 0.59
SPTAN1-209ENST00000497216 GRIN3BO60391 1043 aa18.75■□□□□ 0.59
SPTAN1-209ENST00000497216 C1QTNF8P60827 252 aa18.75■□□□□ 0.59
SPTAN1-209ENST00000497216 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
SPTAN1-209ENST00000497216 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
SPTAN1-209ENST00000497216 CD2APQ9Y5K6 639 aa18.75■□□□□ 0.59
SPTAN1-209ENST00000497216 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
SPTAN1-209ENST00000497216 YBX3P16989 372 aaKnown RBP eCLIP18.74■□□□□ 0.59
SPTAN1-209ENST00000497216 MSL1Q68DK7 614 aa18.74■□□□□ 0.59
SPTAN1-209ENST00000497216 PIGBQ92521 554 aa18.74■□□□□ 0.59
SPTAN1-209ENST00000497216 GOLGB1Q14789 3259 aaKnown RBP18.74■□□□□ 0.59
SPTAN1-209ENST00000497216 EYA1Q99502 592 aa18.73■□□□□ 0.59
SPTAN1-209ENST00000497216 AK7Q96M32 723 aa18.72■□□□□ 0.59
SPTAN1-209ENST00000497216 POLKQ9UBT6 870 aa18.72■□□□□ 0.59
SPTAN1-209ENST00000497216 PPM1GO15355 546 aaPredicted RBP18.71■□□□□ 0.59
SPTAN1-209ENST00000497216 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
SPTAN1-209ENST00000497216 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
SPTAN1-209ENST00000497216 COL5A3P25940 1745 aaPredicted RBP18.69■□□□□ 0.58
SPTAN1-209ENST00000497216 LOC102724428A0A0B4J2F2 783 aa18.69■□□□□ 0.58
SPTAN1-209ENST00000497216 SSFA2P28290 1259 aa18.69■□□□□ 0.58
SPTAN1-209ENST00000497216 SIK1P57059 783 aa18.69■□□□□ 0.58
SPTAN1-209ENST00000497216 TMOD3Q9NYL9 352 aa18.69■□□□□ 0.58
SPTAN1-209ENST00000497216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
SPTAN1-209ENST00000497216 GIGYF1O75420 1035 aaPredicted RBP18.68■□□□□ 0.58
SPTAN1-209ENST00000497216 PHKG2P15735 406 aa18.68■□□□□ 0.58
SPTAN1-209ENST00000497216 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
SPTAN1-209ENST00000497216 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
SPTAN1-209ENST00000497216 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
SPTAN1-209ENST00000497216 LINC00116Q8NCU8 138 aa18.67■□□□□ 0.58
SPTAN1-209ENST00000497216 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
SPTAN1-209ENST00000497216 KDRP35968 1356 aa18.66■□□□□ 0.58
SPTAN1-209ENST00000497216 KIAA1551Q9HCM1 1747 aa18.66■□□□□ 0.58
SPTAN1-209ENST00000497216 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
SPTAN1-209ENST00000497216 ADCY9O60503 1353 aa18.65■□□□□ 0.58
SPTAN1-209ENST00000497216 CICQ96RK0 1608 aaPredicted RBP18.64■□□□□ 0.57
SPTAN1-209ENST00000497216 PHF14O94880 888 aa18.64■□□□□ 0.57
SPTAN1-209ENST00000497216 ITPK1Q13572 414 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms