RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 MSH5O43196 834 aa13.75□□□□□ -0.21
SCNM1-206ENST00000497147 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
SCNM1-206ENST00000497147 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
SCNM1-206ENST00000497147 APLP1P51693 650 aa13.75□□□□□ -0.21
SCNM1-206ENST00000497147 COL13A1Q5TAT6 717 aaPredicted RBP13.75□□□□□ -0.21
SCNM1-206ENST00000497147 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
SCNM1-206ENST00000497147 ANKRD24Q8TF21 1146 aa13.74□□□□□ -0.21
SCNM1-206ENST00000497147 SYTL4Q96C24 671 aaPredicted RBP13.74□□□□□ -0.21
SCNM1-206ENST00000497147 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
SCNM1-206ENST00000497147 WWC3Q9ULE0 1092 aa13.73□□□□□ -0.21
SCNM1-206ENST00000497147 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
SCNM1-206ENST00000497147 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
SCNM1-206ENST00000497147 EVC2Q86UK5 1308 aa13.71□□□□□ -0.21
SCNM1-206ENST00000497147 LY75O60449 1722 aa13.71□□□□□ -0.21
SCNM1-206ENST00000497147 CAPN15O75808 1086 aa13.71□□□□□ -0.21
SCNM1-206ENST00000497147 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.22
SCNM1-206ENST00000497147 USP47Q96K76 1375 aa13.71□□□□□ -0.22
SCNM1-206ENST00000497147 USP31Q70CQ4 1352 aa13.7□□□□□ -0.22
SCNM1-206ENST00000497147 IGSF1Q8N6C5 1336 aa13.69□□□□□ -0.22
SCNM1-206ENST00000497147 NME9Q86XW9 330 aa13.69□□□□□ -0.22
SCNM1-206ENST00000497147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCNM1-206ENST00000497147 DOT1LQ8TEK3 1739 aa13.67□□□□□ -0.22
SCNM1-206ENST00000497147 TOMM70O94826 608 aa13.67□□□□□ -0.22
SCNM1-206ENST00000497147 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCNM1-206ENST00000497147 HTRA3P83110 453 aa13.67□□□□□ -0.22
SCNM1-206ENST00000497147 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
SCNM1-206ENST00000497147 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
SCNM1-206ENST00000497147 LTN1O94822 1766 aa13.66□□□□□ -0.22
SCNM1-206ENST00000497147 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
SCNM1-206ENST00000497147 JMYQ8N9B5 988 aa13.65□□□□□ -0.22
SCNM1-206ENST00000497147 SBNO2Q9Y2G9 1366 aa13.65□□□□□ -0.22
SCNM1-206ENST00000497147 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
SCNM1-206ENST00000497147 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
SCNM1-206ENST00000497147 PRELPP51888 382 aa13.64□□□□□ -0.23
SCNM1-206ENST00000497147 KLRG1Q96E93 195 aa13.64□□□□□ -0.23
SCNM1-206ENST00000497147 LTV1Q96GA3 475 aaPredicted RBP13.64□□□□□ -0.23
SCNM1-206ENST00000497147 NMRK2Q9NPI5 230 aa13.64□□□□□ -0.23
SCNM1-206ENST00000497147 CD163L1Q9NR16 1453 aa13.63□□□□□ -0.23
SCNM1-206ENST00000497147 TNS4Q8IZW8 715 aa13.63□□□□□ -0.23
SCNM1-206ENST00000497147 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
SCNM1-206ENST00000497147 ZCRB1Q8TBF4 217 aaKnown RBP13.63□□□□□ -0.23
SCNM1-206ENST00000497147 IP6K1Q92551 441 aa13.63□□□□□ -0.23
SCNM1-206ENST00000497147 MON2Q7Z3U7 1717 aa13.63□□□□□ -0.23
SCNM1-206ENST00000497147 CICQ96RK0 1608 aaPredicted RBP13.63□□□□□ -0.23
SCNM1-206ENST00000497147 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
SCNM1-206ENST00000497147 MEGF6O75095 1541 aa13.62□□□□□ -0.23
SCNM1-206ENST00000497147 C5P01031 1676 aa13.62□□□□□ -0.23
SCNM1-206ENST00000497147 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
SCNM1-206ENST00000497147 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
SCNM1-206ENST00000497147 TMF1P82094 1093 aa13.6□□□□□ -0.23
SCNM1-206ENST00000497147 TOGARAM1Q9Y4F4 1720 aa13.59□□□□□ -0.23
SCNM1-206ENST00000497147 RBM46Q8TBY0 533 aaKnown RBP13.59□□□□□ -0.23
SCNM1-206ENST00000497147 TESK2Q96S53 571 aa13.59□□□□□ -0.23
SCNM1-206ENST00000497147 PALLDQ8WX93 1383 aa13.58□□□□□ -0.23
SCNM1-206ENST00000497147 PHF14O94880 888 aa13.58□□□□□ -0.24
SCNM1-206ENST00000497147 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
SCNM1-206ENST00000497147 C4BP0C0L5 1744 aa13.57□□□□□ -0.24
SCNM1-206ENST00000497147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
SCNM1-206ENST00000497147 FBLN1P23142 703 aa13.57□□□□□ -0.24
SCNM1-206ENST00000497147 AK7Q96M32 723 aa13.57□□□□□ -0.24
SCNM1-206ENST00000497147 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
SCNM1-206ENST00000497147 PXDNLA1KZ92 1463 aa13.56□□□□□ -0.24
SCNM1-206ENST00000497147 HOXC9P31274 260 aa13.56□□□□□ -0.24
SCNM1-206ENST00000497147 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
SCNM1-206ENST00000497147 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
SCNM1-206ENST00000497147 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
SCNM1-206ENST00000497147 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
SCNM1-206ENST00000497147 MPRIPQ6WCQ1 1025 aa13.55□□□□□ -0.24
SCNM1-206ENST00000497147 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
SCNM1-206ENST00000497147 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
SCNM1-206ENST00000497147 BCS1LQ9Y276 419 aa13.55□□□□□ -0.24
SCNM1-206ENST00000497147 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
SCNM1-206ENST00000497147 KIAA1551Q9HCM1 1747 aa13.54□□□□□ -0.24
SCNM1-206ENST00000497147 RGPD2P0DJD1 1756 aa13.54□□□□□ -0.24
SCNM1-206ENST00000497147 FSTL1Q12841 308 aa13.54□□□□□ -0.24
SCNM1-206ENST00000497147 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
SCNM1-206ENST00000497147 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
SCNM1-206ENST00000497147 POLR3GLQ9BT43 218 aa13.54□□□□□ -0.24
SCNM1-206ENST00000497147 UBR3Q6ZT12 1888 aa13.54□□□□□ -0.24
SCNM1-206ENST00000497147 SSFA2P28290 1259 aa13.53□□□□□ -0.24
SCNM1-206ENST00000497147 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
SCNM1-206ENST00000497147 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
SCNM1-206ENST00000497147 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
SCNM1-206ENST00000497147 MMP10P09238 476 aa13.52□□□□□ -0.25
SCNM1-206ENST00000497147 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
SCNM1-206ENST00000497147 C9orf131Q5VYM1 1079 aa13.52□□□□□ -0.25
SCNM1-206ENST00000497147 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
SCNM1-206ENST00000497147 A0A1W2PP64 1363 aa13.52□□□□□ -0.25
SCNM1-206ENST00000497147 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
SCNM1-206ENST00000497147 CYP27B1O15528 508 aa13.51□□□□□ -0.25
SCNM1-206ENST00000497147 AMPHP49418 695 aa13.51□□□□□ -0.25
SCNM1-206ENST00000497147 TGFB2P61812 414 aa13.51□□□□□ -0.25
SCNM1-206ENST00000497147 PIGBQ92521 554 aa13.51□□□□□ -0.25
SCNM1-206ENST00000497147 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
SCNM1-206ENST00000497147 KCPQ6ZWJ8 1503 aa13.5□□□□□ -0.25
SCNM1-206ENST00000497147 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
SCNM1-206ENST00000497147 SLC34A2O95436 690 aa13.5□□□□□ -0.25
SCNM1-206ENST00000497147 DPEP1P16444 411 aa13.5□□□□□ -0.25
SCNM1-206ENST00000497147 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
SCNM1-206ENST00000497147 RRAGCQ9HB90 399 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms