RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
SF1-219ENST00000496969 ZCRB1Q8TBF4 217 aaKnown RBP11.53□□□□□ -0.56
SF1-219ENST00000496969 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
SF1-219ENST00000496969 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
SF1-219ENST00000496969 TNNT2P45379 298 aaPredicted RBP11.52□□□□□ -0.57
SF1-219ENST00000496969 KIF7Q2M1P5 1343 aa11.52□□□□□ -0.57
SF1-219ENST00000496969 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
SF1-219ENST00000496969 PCDH11XQ9BZA7 1347 aa11.52□□□□□ -0.57
SF1-219ENST00000496969 PCDH11YQ9BZA8 1340 aa11.52□□□□□ -0.57
SF1-219ENST00000496969 KCNQ2O43526 872 aa11.51□□□□□ -0.57
SF1-219ENST00000496969 TXNRD1Q16881 649 aa11.51□□□□□ -0.57
SF1-219ENST00000496969 PTF1AQ7RTS3 328 aa11.51□□□□□ -0.57
SF1-219ENST00000496969 MORC1Q86VD1 984 aa11.51□□□□□ -0.57
SF1-219ENST00000496969 SYTL4Q96C24 671 aaPredicted RBP11.51□□□□□ -0.57
SF1-219ENST00000496969 STK32BQ9NY57 414 aa11.5□□□□□ -0.57
SF1-219ENST00000496969 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
SF1-219ENST00000496969 NCAPD2Q15021 1401 aa11.49□□□□□ -0.57
SF1-219ENST00000496969 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
SF1-219ENST00000496969 LY75O60449 1722 aa11.49□□□□□ -0.57
SF1-219ENST00000496969 CASZ1Q86V15 1759 aa11.49□□□□□ -0.57
SF1-219ENST00000496969 SPG7Q9UQ90 795 aa11.48□□□□□ -0.57
SF1-219ENST00000496969 KAT6BQ8WYB5 2073 aa11.48□□□□□ -0.57
SF1-219ENST00000496969 PLEKHG2Q9H7P9 1386 aa11.47□□□□□ -0.57
SF1-219ENST00000496969 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
SF1-219ENST00000496969 TOGARAM1Q9Y4F4 1720 aa11.46□□□□□ -0.57
SF1-219ENST00000496969 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
SF1-219ENST00000496969 EIF4A2Q14240 407 aaKnown RBP11.46□□□□□ -0.57
SF1-219ENST00000496969 EYA1Q99502 592 aa11.46□□□□□ -0.57
SF1-219ENST00000496969 QSER1Q2KHR3 1735 aa11.46□□□□□ -0.58
SF1-219ENST00000496969 ITGB4P16144 1822 aa11.45□□□□□ -0.58
SF1-219ENST00000496969 SLC15A2Q16348 729 aa11.45□□□□□ -0.58
SF1-219ENST00000496969 SLC27A3Q5K4L6 730 aa11.45□□□□□ -0.58
SF1-219ENST00000496969 PROM2Q8N271 834 aa11.45□□□□□ -0.58
SF1-219ENST00000496969 SPON1Q9HCB6 807 aa11.45□□□□□ -0.58
SF1-219ENST00000496969 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
SF1-219ENST00000496969 IGSF1Q8N6C5 1336 aa11.44□□□□□ -0.58
SF1-219ENST00000496969 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
SF1-219ENST00000496969 C5P01031 1676 aa11.43□□□□□ -0.58
SF1-219ENST00000496969 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
SF1-219ENST00000496969 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
SF1-219ENST00000496969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.582e-10■■□□□ 12.1
SF1-219ENST00000496969 CYP27B1O15528 508 aa11.42□□□□□ -0.58
SF1-219ENST00000496969 IFNL2Q8IZJ0 200 aa11.42□□□□□ -0.58
SF1-219ENST00000496969 CCNL1Q9UK58 526 aaPredicted RBP11.42□□□□□ -0.58
SF1-219ENST00000496969 MPRIPQ6WCQ1 1025 aa11.41□□□□□ -0.58
SF1-219ENST00000496969 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
SF1-219ENST00000496969 PALLDQ8WX93 1383 aa11.41□□□□□ -0.58
SF1-219ENST00000496969 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
SF1-219ENST00000496969 ZBTB7AO95365 584 aa11.4□□□□□ -0.58
SF1-219ENST00000496969 HSP90AB1P08238 724 aaKnown RBP11.4□□□□□ -0.58
SF1-219ENST00000496969 PHKG2P15735 406 aa11.4□□□□□ -0.58
SF1-219ENST00000496969 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
SF1-219ENST00000496969 AMOTQ4VCS5 1084 aa11.4□□□□□ -0.58
SF1-219ENST00000496969 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
SF1-219ENST00000496969 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
SF1-219ENST00000496969 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
SF1-219ENST00000496969 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.58
SF1-219ENST00000496969 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
SF1-219ENST00000496969 ZNF827Q17R98 1081 aa11.39□□□□□ -0.59
SF1-219ENST00000496969 MTFR1LQ9H019 292 aa11.39□□□□□ -0.59
SF1-219ENST00000496969 TAF1LQ8IZX4 1826 aa11.39□□□□□ -0.59
SF1-219ENST00000496969 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
SF1-219ENST00000496969 MTHFSP49914 203 aa11.38□□□□□ -0.59
SF1-219ENST00000496969 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
SF1-219ENST00000496969 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
SF1-219ENST00000496969 TFCP2L1Q9NZI6 479 aa11.38□□□□□ -0.59
SF1-219ENST00000496969 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
SF1-219ENST00000496969 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
SF1-219ENST00000496969 DIAPH1O60610 1272 aaKnown RBP11.37□□□□□ -0.59
SF1-219ENST00000496969 IL13P35225 146 aa11.37□□□□□ -0.59
SF1-219ENST00000496969 ZNF530Q6P9A1 599 aaPredicted RBP11.37□□□□□ -0.59
SF1-219ENST00000496969 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
SF1-219ENST00000496969 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
SF1-219ENST00000496969 KDRP35968 1356 aa11.37□□□□□ -0.59
SF1-219ENST00000496969 KCNQ4P56696 695 aa11.36□□□□□ -0.59
SF1-219ENST00000496969 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
SF1-219ENST00000496969 DCAF5Q96JK2 942 aa11.36□□□□□ -0.59
SF1-219ENST00000496969 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
SF1-219ENST00000496969 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
SF1-219ENST00000496969 MSH5O43196 834 aa11.35□□□□□ -0.59
SF1-219ENST00000496969 POLD1P28340 1107 aa11.35□□□□□ -0.59
SF1-219ENST00000496969 SLC16A10Q8TF71 515 aa11.35□□□□□ -0.59
SF1-219ENST00000496969 PIGBQ92521 554 aa11.35□□□□□ -0.59
SF1-219ENST00000496969 AK7Q96M32 723 aa11.35□□□□□ -0.59
SF1-219ENST00000496969 SCN11AQ9UI33 1791 aa11.35□□□□□ -0.59
SF1-219ENST00000496969 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
SF1-219ENST00000496969 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
SF1-219ENST00000496969 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
SF1-219ENST00000496969 ERVV-2B6SEH9 535 aa11.34□□□□□ -0.59
SF1-219ENST00000496969 CABP4P57796 275 aa11.34□□□□□ -0.59
SF1-219ENST00000496969 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
SF1-219ENST00000496969 KDM6AO15550 1401 aaPredicted RBP11.34□□□□□ -0.59
SF1-219ENST00000496969 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
SF1-219ENST00000496969 U2SURPO15042 1029 aaKnown RBP11.33□□□□□ -0.6
SF1-219ENST00000496969 HMOX1P09601 288 aa11.33□□□□□ -0.6
SF1-219ENST00000496969 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
SF1-219ENST00000496969 SRCAPQ6ZRS2 3230 aa11.32□□□□□ -0.6
SF1-219ENST00000496969 UBR3Q6ZT12 1888 aa11.32□□□□□ -0.6
SF1-219ENST00000496969 LOC102724428A0A0B4J2F2 783 aa11.32□□□□□ -0.6
SF1-219ENST00000496969 PTGER2P43116 358 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms