RNA–Protein interactions for RNA: ENST00000496381.5

CDK5RAP1-215, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 858 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-215ENST00000496381 RGPD1P0DJD0 1748 aa17.89■□□□□ 0.46
CDK5RAP1-215ENST00000496381 AMOTQ4VCS5 1084 aa17.89■□□□□ 0.45
CDK5RAP1-215ENST00000496381 SPG7Q9UQ90 795 aa17.89■□□□□ 0.45
CDK5RAP1-215ENST00000496381 USHBP1Q8N6Y0 703 aa17.88■□□□□ 0.45
CDK5RAP1-215ENST00000496381 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP1-215ENST00000496381 SULT6B1Q6IMI4 303 aa17.87■□□□□ 0.45
CDK5RAP1-215ENST00000496381 MEGF6O75095 1541 aa17.87■□□□□ 0.45
CDK5RAP1-215ENST00000496381 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP1-215ENST00000496381 PLEKHO1Q53GL0 409 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP1-215ENST00000496381 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
CDK5RAP1-215ENST00000496381 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
CDK5RAP1-215ENST00000496381 SOCS7O14512 581 aa17.85■□□□□ 0.45
CDK5RAP1-215ENST00000496381 FCHSD2O94868 740 aa17.84■□□□□ 0.45
CDK5RAP1-215ENST00000496381 MARCH10Q8NA82 808 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP1-215ENST00000496381 PKD1L3Q7Z443 1732 aa17.84■□□□□ 0.45
CDK5RAP1-215ENST00000496381 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP1-215ENST00000496381 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP1-215ENST00000496381 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDK5RAP1-215ENST00000496381 NEFMP07197 916 aa17.82■□□□□ 0.44
CDK5RAP1-215ENST00000496381 IFNL2Q8IZJ0 200 aa17.82■□□□□ 0.44
CDK5RAP1-215ENST00000496381 DDX54Q8TDD1 881 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP1-215ENST00000496381 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP1-215ENST00000496381 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
CDK5RAP1-215ENST00000496381 HMOX1P09601 288 aa17.8■□□□□ 0.44
CDK5RAP1-215ENST00000496381 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP1-215ENST00000496381 UPF1Q92900 1129 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDK5RAP1-215ENST00000496381 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
CDK5RAP1-215ENST00000496381 WDR43Q15061 677 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDK5RAP1-215ENST00000496381 C1orf141Q5JVX7 400 aa17.78■□□□□ 0.44
CDK5RAP1-215ENST00000496381 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
CDK5RAP1-215ENST00000496381 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
CDK5RAP1-215ENST00000496381 BCL11BQ9C0K0 894 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP1-215ENST00000496381 CYP27B1O15528 508 aa17.76■□□□□ 0.43
CDK5RAP1-215ENST00000496381 PHKG2P15735 406 aa17.76■□□□□ 0.43
CDK5RAP1-215ENST00000496381 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
CDK5RAP1-215ENST00000496381 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
CDK5RAP1-215ENST00000496381 ZNF530Q6P9A1 599 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP1-215ENST00000496381 FAM182BQ5T319 152 aa17.75■□□□□ 0.43
CDK5RAP1-215ENST00000496381 DCAF5Q96JK2 942 aa17.75■□□□□ 0.43
CDK5RAP1-215ENST00000496381 SBF2Q86WG5 1849 aa17.75■□□□□ 0.43
CDK5RAP1-215ENST00000496381 HMGB2P26583 209 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP1-215ENST00000496381 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP1-215ENST00000496381 TRIM37O94972 964 aa17.73■□□□□ 0.43
CDK5RAP1-215ENST00000496381 BAG6P46379 1132 aa17.73■□□□□ 0.43
CDK5RAP1-215ENST00000496381 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
CDK5RAP1-215ENST00000496381 NHSQ6T4R5 1651 aa17.72■□□□□ 0.43
CDK5RAP1-215ENST00000496381 ERVV-2B6SEH9 535 aa17.72■□□□□ 0.43
CDK5RAP1-215ENST00000496381 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP1-215ENST00000496381 MRS2Q9HD23 443 aa17.72■□□□□ 0.43
CDK5RAP1-215ENST00000496381 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP1-215ENST00000496381 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
CDK5RAP1-215ENST00000496381 CCER2I3L3R5 266 aa17.7■□□□□ 0.42
CDK5RAP1-215ENST00000496381 PLSCR1O15162 318 aa17.7■□□□□ 0.42
CDK5RAP1-215ENST00000496381 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
CDK5RAP1-215ENST00000496381 APBA3O96018 575 aa17.69■□□□□ 0.42
CDK5RAP1-215ENST00000496381 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP1-215ENST00000496381 RUNDC1Q96C34 613 aa17.68■□□□□ 0.42
CDK5RAP1-215ENST00000496381 ACSBG1Q96GR2 724 aa17.68■□□□□ 0.42
CDK5RAP1-215ENST00000496381 PHACTR3Q96KR7 559 aa17.68■□□□□ 0.42
CDK5RAP1-215ENST00000496381 TNS1Q9HBL0 1735 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP1-215ENST00000496381 ADAMTS8Q9UP79 889 aa17.68■□□□□ 0.42
CDK5RAP1-215ENST00000496381 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
CDK5RAP1-215ENST00000496381 MAP3K5Q99683 1374 aa17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 RGPD3A6NKT7 1758 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 RGPD4Q7Z3J3 1758 aa17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 RTF1Q92541 710 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 TMOD3Q9NYL9 352 aa17.67■□□□□ 0.42
CDK5RAP1-215ENST00000496381 KCNQ2O43526 872 aa17.66■□□□□ 0.42
CDK5RAP1-215ENST00000496381 CABP4P57796 275 aa17.66■□□□□ 0.42
CDK5RAP1-215ENST00000496381 LMOD3Q0VAK6 560 aa17.66■□□□□ 0.42
CDK5RAP1-215ENST00000496381 SMARCC1Q92922 1105 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP1-215ENST00000496381 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
CDK5RAP1-215ENST00000496381 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
CDK5RAP1-215ENST00000496381 EP400Q96L91 3159 aa17.64■□□□□ 0.41
CDK5RAP1-215ENST00000496381 RNMTO43148 476 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP1-215ENST00000496381 MPRIPQ6WCQ1 1025 aa17.64■□□□□ 0.41
CDK5RAP1-215ENST00000496381 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
CDK5RAP1-215ENST00000496381 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP1-215ENST00000496381 ITGB4P16144 1822 aa17.63■□□□□ 0.41
CDK5RAP1-215ENST00000496381 BTAF1O14981 1849 aa17.63■□□□□ 0.41
CDK5RAP1-215ENST00000496381 TOGARAM1Q9Y4F4 1720 aa17.62■□□□□ 0.41
CDK5RAP1-215ENST00000496381 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
CDK5RAP1-215ENST00000496381 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP1-215ENST00000496381 CAMKK2Q96RR4 588 aa17.62■□□□□ 0.41
CDK5RAP1-215ENST00000496381 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
CDK5RAP1-215ENST00000496381 TEFQ10587 303 aa17.61■□□□□ 0.41
CDK5RAP1-215ENST00000496381 SLC27A3Q5K4L6 730 aa17.61■□□□□ 0.41
CDK5RAP1-215ENST00000496381 PIGBQ92521 554 aa17.61■□□□□ 0.41
CDK5RAP1-215ENST00000496381 CEMIPQ8WUJ3 1361 aa17.61■□□□□ 0.41
CDK5RAP1-215ENST00000496381 MRC1P22897 1456 aa17.61■□□□□ 0.41
CDK5RAP1-215ENST00000496381 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP1-215ENST00000496381 EN1Q05925 392 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP1-215ENST00000496381 RIPK4P57078 832 aa17.59■□□□□ 0.41
CDK5RAP1-215ENST00000496381 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
CDK5RAP1-215ENST00000496381 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
CDK5RAP1-215ENST00000496381 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
CDK5RAP1-215ENST00000496381 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms