RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 LRRC4BQ9NT99 713 aa19.99■□□□□ 0.79
CXCL12-208ENST00000496375 SMG6Q86US8 1419 aaKnown RBP19.99■□□□□ 0.79
CXCL12-208ENST00000496375 SYTL4Q96C24 671 aaPredicted RBP19.98■□□□□ 0.79
CXCL12-208ENST00000496375 CARD14Q9BXL6 1004 aa19.98■□□□□ 0.79
CXCL12-208ENST00000496375 MTFR1LQ9H019 292 aa19.98■□□□□ 0.79
CXCL12-208ENST00000496375 NSD3Q9BZ95 1437 aa19.98■□□□□ 0.79
CXCL12-208ENST00000496375 PRIM1P49642 420 aaKnown RBP19.97■□□□□ 0.79
CXCL12-208ENST00000496375 ZNF827Q17R98 1081 aa19.97■□□□□ 0.79
CXCL12-208ENST00000496375 INSRP06213 1382 aa19.96■□□□□ 0.79
CXCL12-208ENST00000496375 FLT4P35916 1363 aa19.96■□□□□ 0.79
CXCL12-208ENST00000496375 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
CXCL12-208ENST00000496375 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
CXCL12-208ENST00000496375 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
CXCL12-208ENST00000496375 RAPGEF4Q8WZA2 1011 aa19.95■□□□□ 0.78
CXCL12-208ENST00000496375 NSD2O96028 1365 aa19.95■□□□□ 0.78
CXCL12-208ENST00000496375 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
CXCL12-208ENST00000496375 KIF24Q5T7B8 1368 aa19.94■□□□□ 0.78
CXCL12-208ENST00000496375 TATP17735 454 aaPredicted RBP19.93■□□□□ 0.78
CXCL12-208ENST00000496375 YY1P25490 414 aa19.93■□□□□ 0.78
CXCL12-208ENST00000496375 AKT1S1Q96B36 256 aa19.93■□□□□ 0.78
CXCL12-208ENST00000496375 SGIP1Q9BQI5 828 aa19.93■□□□□ 0.78
CXCL12-208ENST00000496375 KCNQ4P56696 695 aa19.92■□□□□ 0.78
CXCL12-208ENST00000496375 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
CXCL12-208ENST00000496375 LY75O60449 1722 aa19.91■□□□□ 0.78
CXCL12-208ENST00000496375 FHDC1Q9C0D6 1143 aaPredicted RBP19.91■□□□□ 0.78
CXCL12-208ENST00000496375 QSER1Q2KHR3 1735 aa19.9■□□□□ 0.78
CXCL12-208ENST00000496375 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
CXCL12-208ENST00000496375 TUBGCP6Q96RT7 1819 aa19.88■□□□□ 0.77
CXCL12-208ENST00000496375 PCDH11XQ9BZA7 1347 aa19.88■□□□□ 0.77
CXCL12-208ENST00000496375 PCDH11YQ9BZA8 1340 aa19.88■□□□□ 0.77
CXCL12-208ENST00000496375 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
CXCL12-208ENST00000496375 ARXQ96QS3 562 aa19.88■□□□□ 0.77
CXCL12-208ENST00000496375 SYT17Q9BSW7 474 aa19.88■□□□□ 0.77
CXCL12-208ENST00000496375 UTRNP46939 3433 aa19.87■□□□□ 0.77
CXCL12-208ENST00000496375 PNPLA7Q6ZV29 1317 aa19.87■□□□□ 0.77
CXCL12-208ENST00000496375 TFCP2L1Q9NZI6 479 aa19.87■□□□□ 0.77
CXCL12-208ENST00000496375 CCNL1Q9UK58 526 aaPredicted RBP19.87■□□□□ 0.77
CXCL12-208ENST00000496375 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
CXCL12-208ENST00000496375 MAP2P11137 1827 aaKnown RBP19.86■□□□□ 0.77
CXCL12-208ENST00000496375 EIF4G2P78344 907 aaKnown RBP eCLIP19.85■□□□□ 0.77
CXCL12-208ENST00000496375 SLC16A10Q8TF71 515 aa19.85■□□□□ 0.77
CXCL12-208ENST00000496375 CYP27B1O15528 508 aa19.84■□□□□ 0.77
CXCL12-208ENST00000496375 PKD1L3Q7Z443 1732 aa19.84■□□□□ 0.77
CXCL12-208ENST00000496375 NCAPD2Q15021 1401 aa19.84■□□□□ 0.77
CXCL12-208ENST00000496375 WASHC2AQ641Q2 1341 aa19.83■□□□□ 0.77
CXCL12-208ENST00000496375 COL24A1Q17RW2 1714 aa19.82■□□□□ 0.76
CXCL12-208ENST00000496375 TOGARAM1Q9Y4F4 1720 aa19.82■□□□□ 0.76
CXCL12-208ENST00000496375 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
CXCL12-208ENST00000496375 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
CXCL12-208ENST00000496375 POLD1P28340 1107 aa19.81■□□□□ 0.76
CXCL12-208ENST00000496375 MPRIPQ6WCQ1 1025 aa19.81■□□□□ 0.76
CXCL12-208ENST00000496375 POLKQ9UBT6 870 aa19.81■□□□□ 0.76
CXCL12-208ENST00000496375 ITGB4P16144 1822 aa19.81■□□□□ 0.76
CXCL12-208ENST00000496375 TNNT2P45379 298 aaPredicted RBP19.8■□□□□ 0.76
CXCL12-208ENST00000496375 EYA1Q99502 592 aa19.8■□□□□ 0.76
CXCL12-208ENST00000496375 PALLDQ8WX93 1383 aa19.8■□□□□ 0.76
CXCL12-208ENST00000496375 C5P01031 1676 aa19.79■□□□□ 0.76
CXCL12-208ENST00000496375 SPG7Q9UQ90 795 aa19.79■□□□□ 0.76
CXCL12-208ENST00000496375 MSH5O43196 834 aa19.78■□□□□ 0.76
CXCL12-208ENST00000496375 KLHL34Q8N239 644 aa19.78■□□□□ 0.76
CXCL12-208ENST00000496375 COL23A1Q86Y22 540 aaPredicted RBP19.77■□□□□ 0.76
CXCL12-208ENST00000496375 TAF1LQ8IZX4 1826 aa19.76■□□□□ 0.75
CXCL12-208ENST00000496375 NKX1-1Q15270 411 aaPredicted RBP19.76■□□□□ 0.75
CXCL12-208ENST00000496375 PANK3Q9H999 370 aa19.76■□□□□ 0.75
CXCL12-208ENST00000496375 EIF4A2Q14240 407 aaKnown RBP19.75■□□□□ 0.75
CXCL12-208ENST00000496375 PIGBQ92521 554 aa19.75■□□□□ 0.75
CXCL12-208ENST00000496375 SMARCC1Q92922 1105 aaPredicted RBP19.75■□□□□ 0.75
CXCL12-208ENST00000496375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.75■□□□□ 0.75
CXCL12-208ENST00000496375 CHD4Q14839 1912 aa19.74■□□□□ 0.75
CXCL12-208ENST00000496375 GOLGB1Q14789 3259 aaKnown RBP19.73■□□□□ 0.75
CXCL12-208ENST00000496375 HMGB2P26583 209 aaKnown RBP19.73■□□□□ 0.75
CXCL12-208ENST00000496375 C4BP0C0L5 1744 aa19.72■□□□□ 0.75
CXCL12-208ENST00000496375 GPR162Q16538 588 aa19.72■□□□□ 0.75
CXCL12-208ENST00000496375 MSL1Q68DK7 614 aa19.72■□□□□ 0.75
CXCL12-208ENST00000496375 PHKG2P15735 406 aa19.71■□□□□ 0.75
CXCL12-208ENST00000496375 IFNL2Q8IZJ0 200 aa19.71■□□□□ 0.75
CXCL12-208ENST00000496375 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
CXCL12-208ENST00000496375 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
CXCL12-208ENST00000496375 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
CXCL12-208ENST00000496375 AK7Q96M32 723 aa19.7■□□□□ 0.74
CXCL12-208ENST00000496375 IGSF1Q8N6C5 1336 aa19.7■□□□□ 0.74
CXCL12-208ENST00000496375 ZNF784Q8NCA9 323 aaPredicted RBP19.69■□□□□ 0.74
CXCL12-208ENST00000496375 LOC102724428A0A0B4J2F2 783 aa19.68■□□□□ 0.74
CXCL12-208ENST00000496375 SIK1P57059 783 aa19.68■□□□□ 0.74
CXCL12-208ENST00000496375 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
CXCL12-208ENST00000496375 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
CXCL12-208ENST00000496375 MORC1Q86VD1 984 aa19.67■□□□□ 0.74
CXCL12-208ENST00000496375 ASAP1Q9ULH1 1129 aa19.67■□□□□ 0.74
CXCL12-208ENST00000496375 PLEKHG2Q9H7P9 1386 aa19.67■□□□□ 0.74
CXCL12-208ENST00000496375 ZEB1P37275 1124 aaPredicted RBP19.66■□□□□ 0.74
CXCL12-208ENST00000496375 AMIGO3Q86WK7 504 aa19.66■□□□□ 0.74
CXCL12-208ENST00000496375 PHF14O94880 888 aa19.65■□□□□ 0.74
CXCL12-208ENST00000496375 SMIM5Q71RC9 77 aa19.65■□□□□ 0.74
CXCL12-208ENST00000496375 LINC00116Q8NCU8 138 aa19.65■□□□□ 0.74
CXCL12-208ENST00000496375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
CXCL12-208ENST00000496375 ATG3Q9NT62 314 aa19.64■□□□□ 0.73
CXCL12-208ENST00000496375 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.73
CXCL12-208ENST00000496375 ATP6V1AP38606 617 aa19.63■□□□□ 0.73
CXCL12-208ENST00000496375 ITPK1Q13572 414 aa19.63■□□□□ 0.73
CXCL12-208ENST00000496375 PLEKHO1Q53GL0 409 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms