RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 RGPD4Q7Z3J3 1758 aa24.03■■□□□ 1.44
RHBDD3-207ENST00000496342 BCL9O00512 1426 aa24.01■■□□□ 1.43
RHBDD3-207ENST00000496342 ACSBG1Q96GR2 724 aa24.01■■□□□ 1.43
RHBDD3-207ENST00000496342 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
RHBDD3-207ENST00000496342 EIF4A2Q14240 407 aaKnown RBP24■■□□□ 1.43
RHBDD3-207ENST00000496342 DDX54Q8TDD1 881 aaKnown RBP24■■□□□ 1.43
RHBDD3-207ENST00000496342 CAMKK2Q96RR4 588 aa24■■□□□ 1.43
RHBDD3-207ENST00000496342 KCNQ2O43526 872 aa23.99■■□□□ 1.43
RHBDD3-207ENST00000496342 EYA1Q99502 592 aa23.98■■□□□ 1.43
RHBDD3-207ENST00000496342 TOGARAM1Q9Y4F4 1720 aa23.97■■□□□ 1.43
RHBDD3-207ENST00000496342 RAPGEF4Q8WZA2 1011 aa23.96■■□□□ 1.43
RHBDD3-207ENST00000496342 TATP17735 454 aaPredicted RBP23.95■■□□□ 1.42
RHBDD3-207ENST00000496342 ZCRB1Q8TBF4 217 aaKnown RBP23.95■■□□□ 1.42
RHBDD3-207ENST00000496342 BCL11BQ9C0K0 894 aaPredicted RBP23.95■■□□□ 1.42
RHBDD3-207ENST00000496342 PSDA5PKW4 1024 aaPredicted RBP23.93■■□□□ 1.42
RHBDD3-207ENST00000496342 ITGB4P16144 1822 aa23.93■■□□□ 1.42
RHBDD3-207ENST00000496342 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
RHBDD3-207ENST00000496342 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
RHBDD3-207ENST00000496342 IGSF1Q8N6C5 1336 aa23.89■■□□□ 1.42
RHBDD3-207ENST00000496342 MTHFSP49914 203 aa23.89■■□□□ 1.41
RHBDD3-207ENST00000496342 CYP27B1O15528 508 aa23.87■■□□□ 1.41
RHBDD3-207ENST00000496342 AEBP1Q8IUX7 1158 aa23.87■■□□□ 1.41
RHBDD3-207ENST00000496342 PCDH11XQ9BZA7 1347 aa23.86■■□□□ 1.41
RHBDD3-207ENST00000496342 PCDH11YQ9BZA8 1340 aa23.86■■□□□ 1.41
RHBDD3-207ENST00000496342 R3HDM1Q15032 1099 aaKnown RBP23.86■■□□□ 1.41
RHBDD3-207ENST00000496342 SYTL4Q96C24 671 aaPredicted RBP23.86■■□□□ 1.41
RHBDD3-207ENST00000496342 COL3A1P02461 1466 aaPredicted RBP23.86■■□□□ 1.41
RHBDD3-207ENST00000496342 LY75O60449 1722 aa23.85■■□□□ 1.41
RHBDD3-207ENST00000496342 PLSCR1O15162 318 aa23.85■■□□□ 1.41
RHBDD3-207ENST00000496342 PROM2Q8N271 834 aa23.85■■□□□ 1.41
RHBDD3-207ENST00000496342 IL13P35225 146 aa23.84■■□□□ 1.41
RHBDD3-207ENST00000496342 PRIM1P49642 420 aaKnown RBP23.84■■□□□ 1.41
RHBDD3-207ENST00000496342 VIRMAQ69YN4 1812 aaKnown RBP23.84■■□□□ 1.41
RHBDD3-207ENST00000496342 PAPPAQ13219 1627 aa23.82■■□□□ 1.4
RHBDD3-207ENST00000496342 ANO8Q9HCE9 1232 aaPredicted RBP23.82■■□□□ 1.4
RHBDD3-207ENST00000496342 TXNRD1Q16881 649 aa23.81■■□□□ 1.4
RHBDD3-207ENST00000496342 SULT6B1Q6IMI4 303 aa23.79■■□□□ 1.4
RHBDD3-207ENST00000496342 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
RHBDD3-207ENST00000496342 TUBGCP6Q96RT7 1819 aa23.79■■□□□ 1.4
RHBDD3-207ENST00000496342 CASZ1Q86V15 1759 aa23.77■■□□□ 1.4
RHBDD3-207ENST00000496342 LRP5O75197 1615 aa23.77■■□□□ 1.4
RHBDD3-207ENST00000496342 KDRP35968 1356 aa23.77■■□□□ 1.4
RHBDD3-207ENST00000496342 HMOX1P09601 288 aa23.76■■□□□ 1.39
RHBDD3-207ENST00000496342 DIAPH1O60610 1272 aaKnown RBP23.75■■□□□ 1.39
RHBDD3-207ENST00000496342 PHKG2P15735 406 aa23.75■■□□□ 1.39
RHBDD3-207ENST00000496342 KCNQ4P56696 695 aa23.75■■□□□ 1.39
RHBDD3-207ENST00000496342 TAF1LQ8IZX4 1826 aa23.75■■□□□ 1.39
RHBDD3-207ENST00000496342 SCN11AQ9UI33 1791 aa23.74■■□□□ 1.39
RHBDD3-207ENST00000496342 PPP2R1AP30153 589 aa23.74■■□□□ 1.39
RHBDD3-207ENST00000496342 NBPF14Q5TI25 921 aa23.74■■□□□ 1.39
RHBDD3-207ENST00000496342 LRRC4BQ9NT99 713 aa23.74■■□□□ 1.39
RHBDD3-207ENST00000496342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.74■■□□□ 1.39
RHBDD3-207ENST00000496342 DDX10Q13206 875 aaKnown RBP23.73■■□□□ 1.39
RHBDD3-207ENST00000496342 MPRIPQ6WCQ1 1025 aa23.73■■□□□ 1.39
RHBDD3-207ENST00000496342 NKX1-1Q15270 411 aaPredicted RBP23.72■■□□□ 1.39
RHBDD3-207ENST00000496342 ZNF530Q6P9A1 599 aaPredicted RBP23.72■■□□□ 1.39
RHBDD3-207ENST00000496342 IFNL2Q8IZJ0 200 aa23.72■■□□□ 1.39
RHBDD3-207ENST00000496342 C5P01031 1676 aa23.72■■□□□ 1.39
RHBDD3-207ENST00000496342 KDM6AO15550 1401 aaPredicted RBP23.71■■□□□ 1.39
RHBDD3-207ENST00000496342 PLEKHG2Q9H7P9 1386 aa23.7■■□□□ 1.38
RHBDD3-207ENST00000496342 PLEKHO1Q53GL0 409 aaPredicted RBP23.7■■□□□ 1.38
RHBDD3-207ENST00000496342 U2SURPO15042 1029 aaKnown RBP23.69■■□□□ 1.38
RHBDD3-207ENST00000496342 ZEB1P37275 1124 aaPredicted RBP23.69■■□□□ 1.38
RHBDD3-207ENST00000496342 PDGFDQ9GZP0 370 aaPredicted RBP23.69■■□□□ 1.38
RHBDD3-207ENST00000496342 ZNF827Q17R98 1081 aa23.68■■□□□ 1.38
RHBDD3-207ENST00000496342 QSER1Q2KHR3 1735 aa23.67■■□□□ 1.38
RHBDD3-207ENST00000496342 PIGBQ92521 554 aa23.67■■□□□ 1.38
RHBDD3-207ENST00000496342 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
RHBDD3-207ENST00000496342 STK32BQ9NY57 414 aa23.66■■□□□ 1.38
RHBDD3-207ENST00000496342 SLC15A2Q16348 729 aa23.65■■□□□ 1.38
RHBDD3-207ENST00000496342 AMOTQ4VCS5 1084 aa23.65■■□□□ 1.38
RHBDD3-207ENST00000496342 CCNL1Q9UK58 526 aaPredicted RBP23.64■■□□□ 1.37
RHBDD3-207ENST00000496342 CFAP53Q96M91 514 aa23.63■■□□□ 1.37
RHBDD3-207ENST00000496342 TMOD3Q9NYL9 352 aa23.63■■□□□ 1.37
RHBDD3-207ENST00000496342 C1orf141Q5JVX7 400 aa23.62■■□□□ 1.37
RHBDD3-207ENST00000496342 SLC27A3Q5K4L6 730 aa23.62■■□□□ 1.37
RHBDD3-207ENST00000496342 ADAMTS7Q9UKP4 1686 aa23.62■■□□□ 1.37
RHBDD3-207ENST00000496342 MTHFSDQ2M296 383 aaKnown RBP23.61■■□□□ 1.37
RHBDD3-207ENST00000496342 ASAP1Q9ULH1 1129 aa23.61■■□□□ 1.37
RHBDD3-207ENST00000496342 C4BP0C0L5 1744 aa23.61■■□□□ 1.37
RHBDD3-207ENST00000496342 AKT1S1Q96B36 256 aa23.6■■□□□ 1.37
RHBDD3-207ENST00000496342 DCAF5Q96JK2 942 aa23.6■■□□□ 1.37
RHBDD3-207ENST00000496342 UBR3Q6ZT12 1888 aa23.58■■□□□ 1.37
RHBDD3-207ENST00000496342 HSP90AB1P08238 724 aaKnown RBP23.58■■□□□ 1.37
RHBDD3-207ENST00000496342 ZBTB7AO95365 584 aa23.57■■□□□ 1.36
RHBDD3-207ENST00000496342 RSPH6AQ9H0K4 717 aa23.57■■□□□ 1.36
RHBDD3-207ENST00000496342 ATG3Q9NT62 314 aa23.57■■□□□ 1.36
RHBDD3-207ENST00000496342 DLG5Q8TDM6 1919 aa23.57■■□□□ 1.36
RHBDD3-207ENST00000496342 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
RHBDD3-207ENST00000496342 SIPA1L3O60292 1781 aaPredicted RBP23.56■■□□□ 1.36
RHBDD3-207ENST00000496342 PRKAR2BP31323 418 aa23.56■■□□□ 1.36
RHBDD3-207ENST00000496342 AKAP4Q5JQC9 854 aa23.56■■□□□ 1.36
RHBDD3-207ENST00000496342 LGR6Q9HBX8 967 aa23.56■■□□□ 1.36
RHBDD3-207ENST00000496342 MRC1P22897 1456 aa23.56■■□□□ 1.36
RHBDD3-207ENST00000496342 ERVV-2B6SEH9 535 aa23.55■■□□□ 1.36
RHBDD3-207ENST00000496342 U2AF1L5P0DN76 240 aaPredicted RBP23.55■■□□□ 1.36
RHBDD3-207ENST00000496342 CABP4P57796 275 aa23.55■■□□□ 1.36
RHBDD3-207ENST00000496342 U2AF1Q01081 240 aaKnown RBP eCLIP23.55■■□□□ 1.36
RHBDD3-207ENST00000496342 SMARCC1Q92922 1105 aaPredicted RBP23.55■■□□□ 1.36
RHBDD3-207ENST00000496342 TJP1Q07157 1748 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms