RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 ZCRB1Q8TBF4 217 aaKnown RBP19.84■□□□□ 0.77
PDAP1-204ENST00000496335 SHANK3Q9BYB0 1731 aa19.83■□□□□ 0.77
PDAP1-204ENST00000496335 R3HDM1Q15032 1099 aaKnown RBP19.83■□□□□ 0.77
PDAP1-204ENST00000496335 RAPGEF4Q8WZA2 1011 aa19.83■□□□□ 0.77
PDAP1-204ENST00000496335 NHSQ6T4R5 1651 aa19.82■□□□□ 0.76
PDAP1-204ENST00000496335 AMER1Q5JTC6 1135 aaPredicted RBP19.82■□□□□ 0.76
PDAP1-204ENST00000496335 RGPD3A6NKT7 1758 aaPredicted RBP19.81■□□□□ 0.76
PDAP1-204ENST00000496335 RGPD4Q7Z3J3 1758 aa19.81■□□□□ 0.76
PDAP1-204ENST00000496335 TATP17735 454 aaPredicted RBP19.81■□□□□ 0.76
PDAP1-204ENST00000496335 PER1O15534 1290 aaPredicted RBP19.8■□□□□ 0.76
PDAP1-204ENST00000496335 PROM2Q8N271 834 aa19.8■□□□□ 0.76
PDAP1-204ENST00000496335 EYA1Q99502 592 aa19.8■□□□□ 0.76
PDAP1-204ENST00000496335 BTAF1O14981 1849 aa19.79■□□□□ 0.76
PDAP1-204ENST00000496335 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
PDAP1-204ENST00000496335 NCAPD2Q15021 1401 aa19.77■□□□□ 0.76
PDAP1-204ENST00000496335 NBPF14Q5TI25 921 aa19.77■□□□□ 0.76
PDAP1-204ENST00000496335 TXNRD1Q16881 649 aa19.76■□□□□ 0.75
PDAP1-204ENST00000496335 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
PDAP1-204ENST00000496335 DOT1LQ8TEK3 1739 aa19.76■□□□□ 0.75
PDAP1-204ENST00000496335 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
PDAP1-204ENST00000496335 CNGB1Q14028 1251 aaPredicted RBP19.75■□□□□ 0.75
PDAP1-204ENST00000496335 SYTL4Q96C24 671 aaPredicted RBP19.75■□□□□ 0.75
PDAP1-204ENST00000496335 CYP27B1O15528 508 aa19.73■□□□□ 0.75
PDAP1-204ENST00000496335 ANO8Q9HCE9 1232 aaPredicted RBP19.73■□□□□ 0.75
PDAP1-204ENST00000496335 PCDH11XQ9BZA7 1347 aa19.73■□□□□ 0.75
PDAP1-204ENST00000496335 PCDH11YQ9BZA8 1340 aa19.73■□□□□ 0.75
PDAP1-204ENST00000496335 PKD1L3Q7Z443 1732 aa19.72■□□□□ 0.75
PDAP1-204ENST00000496335 IGSF1Q8N6C5 1336 aa19.7■□□□□ 0.74
PDAP1-204ENST00000496335 MTHFSP49914 203 aa19.69■□□□□ 0.74
PDAP1-204ENST00000496335 SPG7Q9UQ90 795 aa19.69■□□□□ 0.74
PDAP1-204ENST00000496335 LRP5O75197 1615 aa19.68■□□□□ 0.74
PDAP1-204ENST00000496335 LRRC4BQ9NT99 713 aa19.67■□□□□ 0.74
PDAP1-204ENST00000496335 NPC1L1Q9UHC9 1359 aa19.67■□□□□ 0.74
PDAP1-204ENST00000496335 IL13P35225 146 aa19.66■□□□□ 0.74
PDAP1-204ENST00000496335 AEBP1Q8IUX7 1158 aa19.66■□□□□ 0.74
PDAP1-204ENST00000496335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.66■□□□□ 0.741e-8■□□□□ 8.1
PDAP1-204ENST00000496335 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
PDAP1-204ENST00000496335 ITGB4P16144 1822 aa19.65■□□□□ 0.74
PDAP1-204ENST00000496335 KCNQ4P56696 695 aa19.65■□□□□ 0.74
PDAP1-204ENST00000496335 STK32BQ9NY57 414 aa19.65■□□□□ 0.74
PDAP1-204ENST00000496335 SLC15A2Q16348 729 aa19.64■□□□□ 0.73
PDAP1-204ENST00000496335 MPRIPQ6WCQ1 1025 aa19.64■□□□□ 0.73
PDAP1-204ENST00000496335 PDGFDQ9GZP0 370 aaPredicted RBP19.64■□□□□ 0.73
PDAP1-204ENST00000496335 LY75O60449 1722 aa19.63■□□□□ 0.73
PDAP1-204ENST00000496335 PHKG2P15735 406 aa19.63■□□□□ 0.73
PDAP1-204ENST00000496335 NKX1-1Q15270 411 aaPredicted RBP19.63■□□□□ 0.73
PDAP1-204ENST00000496335 SULT6B1Q6IMI4 303 aa19.63■□□□□ 0.73
PDAP1-204ENST00000496335 PAPPAQ13219 1627 aa19.62■□□□□ 0.73
PDAP1-204ENST00000496335 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
PDAP1-204ENST00000496335 SLC27A3Q5K4L6 730 aa19.61■□□□□ 0.73
PDAP1-204ENST00000496335 CASZ1Q86V15 1759 aa19.6■□□□□ 0.73
PDAP1-204ENST00000496335 ZNF827Q17R98 1081 aa19.6■□□□□ 0.73
PDAP1-204ENST00000496335 PLEKHO1Q53GL0 409 aaPredicted RBP19.6■□□□□ 0.73
PDAP1-204ENST00000496335 PIGBQ92521 554 aa19.59■□□□□ 0.73
PDAP1-204ENST00000496335 KDRP35968 1356 aa19.58■□□□□ 0.73
PDAP1-204ENST00000496335 PLEKHG2Q9H7P9 1386 aa19.58■□□□□ 0.73
PDAP1-204ENST00000496335 DIAPH1O60610 1272 aaKnown RBP19.58■□□□□ 0.72
PDAP1-204ENST00000496335 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.72
PDAP1-204ENST00000496335 CCNL1Q9UK58 526 aaPredicted RBP19.58■□□□□ 0.72
PDAP1-204ENST00000496335 ZBTB7AO95365 584 aa19.57■□□□□ 0.72
PDAP1-204ENST00000496335 HMOX1P09601 288 aa19.57■□□□□ 0.72
PDAP1-204ENST00000496335 AMOTQ4VCS5 1084 aa19.57■□□□□ 0.72
PDAP1-204ENST00000496335 AKT1S1Q96B36 256 aa19.57■□□□□ 0.72
PDAP1-204ENST00000496335 SPON1Q9HCB6 807 aa19.57■□□□□ 0.72
PDAP1-204ENST00000496335 PALLDQ8WX93 1383 aa19.57■□□□□ 0.72
PDAP1-204ENST00000496335 COL3A1P02461 1466 aaPredicted RBP19.55■□□□□ 0.72
PDAP1-204ENST00000496335 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
PDAP1-204ENST00000496335 ATF5Q9Y2D1 282 aaPredicted RBP19.54■□□□□ 0.72
PDAP1-204ENST00000496335 TUBGCP6Q96RT7 1819 aa19.53■□□□□ 0.72
PDAP1-204ENST00000496335 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
PDAP1-204ENST00000496335 DCAF5Q96JK2 942 aa19.53■□□□□ 0.72
PDAP1-204ENST00000496335 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
PDAP1-204ENST00000496335 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
PDAP1-204ENST00000496335 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.72
PDAP1-204ENST00000496335 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
PDAP1-204ENST00000496335 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
PDAP1-204ENST00000496335 TFCP2L1Q9NZI6 479 aa19.52■□□□□ 0.72
PDAP1-204ENST00000496335 TAF1LQ8IZX4 1826 aa19.52■□□□□ 0.72
PDAP1-204ENST00000496335 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
PDAP1-204ENST00000496335 C5P01031 1676 aa19.51■□□□□ 0.71
PDAP1-204ENST00000496335 PNPLA7Q6ZV29 1317 aa19.51■□□□□ 0.71
PDAP1-204ENST00000496335 ERVV-2B6SEH9 535 aa19.5■□□□□ 0.71
PDAP1-204ENST00000496335 ATG3Q9NT62 314 aa19.5■□□□□ 0.71
PDAP1-204ENST00000496335 PPP1R1BQ9UD71 204 aaPredicted RBP19.5■□□□□ 0.71
PDAP1-204ENST00000496335 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
PDAP1-204ENST00000496335 PTGER2P43116 358 aa19.49■□□□□ 0.71
PDAP1-204ENST00000496335 CABP4P57796 275 aa19.48■□□□□ 0.71
PDAP1-204ENST00000496335 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
PDAP1-204ENST00000496335 MTFR1LQ9H019 292 aa19.48■□□□□ 0.71
PDAP1-204ENST00000496335 SCN11AQ9UI33 1791 aa19.47■□□□□ 0.71
PDAP1-204ENST00000496335 LOC102724428A0A0B4J2F2 783 aa19.47■□□□□ 0.71
PDAP1-204ENST00000496335 SIK1P57059 783 aa19.47■□□□□ 0.71
PDAP1-204ENST00000496335 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
PDAP1-204ENST00000496335 VIRMAQ69YN4 1812 aaKnown RBP19.46■□□□□ 0.71
PDAP1-204ENST00000496335 DDX10Q13206 875 aaKnown RBP19.46■□□□□ 0.71
PDAP1-204ENST00000496335 AKAP4Q5JQC9 854 aa19.46■□□□□ 0.71
PDAP1-204ENST00000496335 NFATC2IPQ8NCF5 419 aa19.45■□□□□ 0.7
PDAP1-204ENST00000496335 SGIP1Q9BQI5 828 aa19.45■□□□□ 0.7
PDAP1-204ENST00000496335 LGR6Q9HBX8 967 aa19.45■□□□□ 0.7
PDAP1-204ENST00000496335 C4BP0C0L5 1744 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms