RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 TXNRD1Q16881 649 aa16.25■□□□□ 0.19
THBS3-208ENST00000496332 RGPD3A6NKT7 1758 aaPredicted RBP16.25■□□□□ 0.19
THBS3-208ENST00000496332 RGPD4Q7Z3J3 1758 aa16.25■□□□□ 0.19
THBS3-208ENST00000496332 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
THBS3-208ENST00000496332 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
THBS3-208ENST00000496332 NSD2O96028 1365 aa16.23■□□□□ 0.19
THBS3-208ENST00000496332 MORC1Q86VD1 984 aa16.22■□□□□ 0.19
THBS3-208ENST00000496332 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
THBS3-208ENST00000496332 LRP5O75197 1615 aa16.21■□□□□ 0.19
THBS3-208ENST00000496332 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.19
THBS3-208ENST00000496332 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.19
THBS3-208ENST00000496332 EYA1Q99502 592 aa16.21■□□□□ 0.19
THBS3-208ENST00000496332 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
THBS3-208ENST00000496332 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
THBS3-208ENST00000496332 EIF4A2Q14240 407 aaKnown RBP16.19■□□□□ 0.18
THBS3-208ENST00000496332 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
THBS3-208ENST00000496332 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
THBS3-208ENST00000496332 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
THBS3-208ENST00000496332 STK32BQ9NY57 414 aa16.18■□□□□ 0.18
THBS3-208ENST00000496332 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
THBS3-208ENST00000496332 NCAPD2Q15021 1401 aa16.18■□□□□ 0.18
THBS3-208ENST00000496332 BTAF1O14981 1849 aa16.17■□□□□ 0.18
THBS3-208ENST00000496332 SLC15A2Q16348 729 aa16.17■□□□□ 0.18
THBS3-208ENST00000496332 CYP27B1O15528 508 aa16.16■□□□□ 0.18
THBS3-208ENST00000496332 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
THBS3-208ENST00000496332 PDGFDQ9GZP0 370 aaPredicted RBP16.15■□□□□ 0.18
THBS3-208ENST00000496332 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
THBS3-208ENST00000496332 SPG7Q9UQ90 795 aa16.15■□□□□ 0.18
THBS3-208ENST00000496332 DOT1LQ8TEK3 1739 aa16.14■□□□□ 0.17
THBS3-208ENST00000496332 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
THBS3-208ENST00000496332 SLC27A3Q5K4L6 730 aa16.14■□□□□ 0.17
THBS3-208ENST00000496332 SPON1Q9HCB6 807 aa16.14■□□□□ 0.17
THBS3-208ENST00000496332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
THBS3-208ENST00000496332 IGSF1Q8N6C5 1336 aa16.13■□□□□ 0.17
THBS3-208ENST00000496332 CC2D1BQ5T0F9 858 aaKnown RBP16.12■□□□□ 0.17
THBS3-208ENST00000496332 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
THBS3-208ENST00000496332 KCNQ4P56696 695 aa16.11■□□□□ 0.17
THBS3-208ENST00000496332 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
THBS3-208ENST00000496332 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
THBS3-208ENST00000496332 MPRIPQ6WCQ1 1025 aa16.11■□□□□ 0.17
THBS3-208ENST00000496332 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
THBS3-208ENST00000496332 PAPPAQ13219 1627 aa16.09■□□□□ 0.17
THBS3-208ENST00000496332 CASZ1Q86V15 1759 aa16.09■□□□□ 0.17
THBS3-208ENST00000496332 PHKG2P15735 406 aa16.09■□□□□ 0.17
THBS3-208ENST00000496332 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
THBS3-208ENST00000496332 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
THBS3-208ENST00000496332 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
THBS3-208ENST00000496332 PPP1R1BQ9UD71 204 aaPredicted RBP16.09■□□□□ 0.17
THBS3-208ENST00000496332 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
THBS3-208ENST00000496332 IL13P35225 146 aa16.08■□□□□ 0.16
THBS3-208ENST00000496332 MTHFSP49914 203 aa16.08■□□□□ 0.16
THBS3-208ENST00000496332 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
THBS3-208ENST00000496332 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
THBS3-208ENST00000496332 PIGBQ92521 554 aa16.07■□□□□ 0.16
THBS3-208ENST00000496332 PLEKHG2Q9H7P9 1386 aa16.07■□□□□ 0.16
THBS3-208ENST00000496332 PLEKHO1Q53GL0 409 aaPredicted RBP16.06■□□□□ 0.16
THBS3-208ENST00000496332 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
THBS3-208ENST00000496332 MTFR1LQ9H019 292 aa16.06■□□□□ 0.16
THBS3-208ENST00000496332 TFCP2L1Q9NZI6 479 aa16.06■□□□□ 0.16
THBS3-208ENST00000496332 LY75O60449 1722 aa16.05■□□□□ 0.16
THBS3-208ENST00000496332 TOGARAM1Q9Y4F4 1720 aa16.05■□□□□ 0.16
THBS3-208ENST00000496332 PALLDQ8WX93 1383 aa16.05■□□□□ 0.16
THBS3-208ENST00000496332 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
THBS3-208ENST00000496332 PTGER2P43116 358 aa16.05■□□□□ 0.16
THBS3-208ENST00000496332 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
THBS3-208ENST00000496332 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
THBS3-208ENST00000496332 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
THBS3-208ENST00000496332 PNPLA7Q6ZV29 1317 aa16.03■□□□□ 0.16
THBS3-208ENST00000496332 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
THBS3-208ENST00000496332 KDRP35968 1356 aa16.02■□□□□ 0.16
THBS3-208ENST00000496332 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
THBS3-208ENST00000496332 DIAPH1O60610 1272 aaKnown RBP16.01■□□□□ 0.15
THBS3-208ENST00000496332 DCAF5Q96JK2 942 aa16.01■□□□□ 0.15
THBS3-208ENST00000496332 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
THBS3-208ENST00000496332 ASAP1Q9ULH1 1129 aa16.01■□□□□ 0.15
THBS3-208ENST00000496332 ITGB4P16144 1822 aa16.01■□□□□ 0.15
THBS3-208ENST00000496332 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
THBS3-208ENST00000496332 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
THBS3-208ENST00000496332 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
THBS3-208ENST00000496332 SLC16A10Q8TF71 515 aa16■□□□□ 0.15
THBS3-208ENST00000496332 HMOX1P09601 288 aa15.99■□□□□ 0.15
THBS3-208ENST00000496332 ATG3Q9NT62 314 aa15.99■□□□□ 0.15
THBS3-208ENST00000496332 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
THBS3-208ENST00000496332 MSH5O43196 834 aa15.98■□□□□ 0.15
THBS3-208ENST00000496332 SIK1P57059 783 aa15.98■□□□□ 0.15
THBS3-208ENST00000496332 KDM6AO15550 1401 aaPredicted RBP15.97■□□□□ 0.15
THBS3-208ENST00000496332 CABP4P57796 275 aa15.97■□□□□ 0.15
THBS3-208ENST00000496332 COL23A1Q86Y22 540 aaPredicted RBP15.97■□□□□ 0.15
THBS3-208ENST00000496332 ARXQ96QS3 562 aa15.97■□□□□ 0.15
THBS3-208ENST00000496332 QSER1Q2KHR3 1735 aa15.97■□□□□ 0.15
THBS3-208ENST00000496332 AK7Q96M32 723 aa15.96■□□□□ 0.15
THBS3-208ENST00000496332 FHDC1Q9C0D6 1143 aaPredicted RBP15.96■□□□□ 0.15
THBS3-208ENST00000496332 C5P01031 1676 aa15.95■□□□□ 0.14
THBS3-208ENST00000496332 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
THBS3-208ENST00000496332 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
THBS3-208ENST00000496332 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
THBS3-208ENST00000496332 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
THBS3-208ENST00000496332 FLAD1Q8NFF5 587 aa15.95■□□□□ 0.14
THBS3-208ENST00000496332 TUBGCP6Q96RT7 1819 aa15.95■□□□□ 0.14
THBS3-208ENST00000496332 COL3A1P02461 1466 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms