RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 AXIN2Q9Y2T1 843 aa27.15■■□□□ 1.94
FGFR1-223ENST00000496296 CRYBG1Q9Y4K1 1723 aa27.14■■□□□ 1.94
FGFR1-223ENST00000496296 BACH2Q9BYV9 841 aa27.14■■□□□ 1.94
FGFR1-223ENST00000496296 CPDO75976 1380 aa27.14■■□□□ 1.94
FGFR1-223ENST00000496296 ABCC6O95255 1503 aa27.14■■□□□ 1.93
FGFR1-223ENST00000496296 CFAP44Q96MT7 982 aa27.13■■□□□ 1.93
FGFR1-223ENST00000496296 PDE4AP27815 886 aa27.13■■□□□ 1.93
FGFR1-223ENST00000496296 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
FGFR1-223ENST00000496296 LRRC59Q96AG4 307 aaKnown RBP27.13■■□□□ 1.93
FGFR1-223ENST00000496296 HTATSF1O43719 755 aaKnown RBP27.12■■□□□ 1.93
FGFR1-223ENST00000496296 ERBB3P21860 1342 aa27.12■■□□□ 1.93
FGFR1-223ENST00000496296 ZNF853P0CG23 659 aa27.11■■□□□ 1.93
FGFR1-223ENST00000496296 DCTN1Q14203 1278 aa27.11■■□□□ 1.93
FGFR1-223ENST00000496296 KIAA0232Q92628 1395 aa27.09■■□□□ 1.93
FGFR1-223ENST00000496296 MCM10Q7L590 875 aa27.09■■□□□ 1.93
FGFR1-223ENST00000496296 NCAPD2Q15021 1401 aa27.08■■□□□ 1.93
FGFR1-223ENST00000496296 GNAT3A8MTJ3 354 aa27.08■■□□□ 1.93
FGFR1-223ENST00000496296 CANXP27824 592 aaKnown RBP27.08■■□□□ 1.93
FGFR1-223ENST00000496296 MBIPQ9NS73 344 aa27.08■■□□□ 1.93
FGFR1-223ENST00000496296 RGPD2P0DJD1 1756 aa27.07■■□□□ 1.92
FGFR1-223ENST00000496296 ANP32AP39687 249 aaKnown RBP27.06■■□□□ 1.92
FGFR1-223ENST00000496296 RGPD5Q99666 1765 aa27.06■■□□□ 1.92
FGFR1-223ENST00000496296 CHRNA2Q15822 529 aa27.06■■□□□ 1.92
FGFR1-223ENST00000496296 ZNF428Q96B54 188 aa27.06■■□□□ 1.92
FGFR1-223ENST00000496296 CAMTA1Q9Y6Y1 1673 aa27.06■■□□□ 1.92
FGFR1-223ENST00000496296 COL18A1P39060 1754 aa27.06■■□□□ 1.92
FGFR1-223ENST00000496296 CSB-PGBD3P0DP91 1061 aa27.05■■□□□ 1.92
FGFR1-223ENST00000496296 AMOTQ4VCS5 1084 aa27.05■■□□□ 1.92
FGFR1-223ENST00000496296 PLEKHO1Q53GL0 409 aaPredicted RBP27.05■■□□□ 1.92
FGFR1-223ENST00000496296 MAP3K5Q99683 1374 aa27.05■■□□□ 1.92
FGFR1-223ENST00000496296 PRDM11Q9NQV5 511 aa27.05■■□□□ 1.92
FGFR1-223ENST00000496296 CLUAP1Q96AJ1 413 aa27.04■■□□□ 1.92
FGFR1-223ENST00000496296 NLRP2Q9NX02 1062 aa27.04■■□□□ 1.92
FGFR1-223ENST00000496296 PANK1Q8TE04 598 aa27.02■■□□□ 1.92
FGFR1-223ENST00000496296 AHDC1Q5TGY3 1603 aaPredicted RBP27.02■■□□□ 1.92
FGFR1-223ENST00000496296 CHL1O00533 1208 aa27.02■■□□□ 1.92
FGFR1-223ENST00000496296 FRAT1Q92837 279 aaPredicted RBP27.02■■□□□ 1.92
FGFR1-223ENST00000496296 IPO9Q96P70 1041 aaKnown RBP27.02■■□□□ 1.92
FGFR1-223ENST00000496296 PHLPP1O60346 1717 aa27.02■■□□□ 1.92
FGFR1-223ENST00000496296 CRB1P82279 1406 aa27.01■■□□□ 1.92
FGFR1-223ENST00000496296 SMC4Q9NTJ3 1288 aa27.01■■□□□ 1.91
FGFR1-223ENST00000496296 FAM208AQ9UK61 1670 aaKnown RBP27.01■■□□□ 1.91
FGFR1-223ENST00000496296 BCL2L13Q9BXK5 485 aa27■■□□□ 1.91
FGFR1-223ENST00000496296 ALDH1L2Q3SY69 923 aa27■■□□□ 1.91
FGFR1-223ENST00000496296 COG6Q9Y2V7 657 aa27■■□□□ 1.91
FGFR1-223ENST00000496296 LMO7Q8WWI1 1683 aa26.99■■□□□ 1.91
FGFR1-223ENST00000496296 ABCA3Q99758 1704 aa26.99■■□□□ 1.91
FGFR1-223ENST00000496296 VIRMAQ69YN4 1812 aaKnown RBP26.98■■□□□ 1.91
FGFR1-223ENST00000496296 RAPGEF4Q8WZA2 1011 aa26.98■■□□□ 1.91
FGFR1-223ENST00000496296 AKAP4Q5JQC9 854 aa26.97■■□□□ 1.91
FGFR1-223ENST00000496296 SSH1Q8WYL5 1049 aa26.97■■□□□ 1.91
FGFR1-223ENST00000496296 TWISTNBQ3B726 338 aaPredicted RBP26.96■■□□□ 1.91
FGFR1-223ENST00000496296 ZNF530Q6P9A1 599 aaPredicted RBP26.96■■□□□ 1.91
FGFR1-223ENST00000496296 ERICH6Q7L0X2 663 aa26.96■■□□□ 1.91
FGFR1-223ENST00000496296 NOP58Q9Y2X3 529 aaKnown RBP26.96■■□□□ 1.91
FGFR1-223ENST00000496296 VAMP4O75379 141 aa26.96■■□□□ 1.91
FGFR1-223ENST00000496296 RLBP1P12271 317 aa26.96■■□□□ 1.91
FGFR1-223ENST00000496296 C1orf141Q5JVX7 400 aa26.96■■□□□ 1.91
FGFR1-223ENST00000496296 ZKSCAN2Q63HK3 967 aa26.96■■□□□ 1.91
FGFR1-223ENST00000496296 COL16A1Q07092 1604 aaPredicted RBP26.95■■□□□ 1.9
FGFR1-223ENST00000496296 IGHDP01880 384 aa26.94■■□□□ 1.9
FGFR1-223ENST00000496296 TATP17735 454 aaPredicted RBP26.94■■□□□ 1.9
FGFR1-223ENST00000496296 TSPYL4Q9UJ04 414 aa26.94■■□□□ 1.9
FGFR1-223ENST00000496296 LRRC37A3O60309 1634 aa26.94■■□□□ 1.9
FGFR1-223ENST00000496296 PLEKHG2Q9H7P9 1386 aa26.94■■□□□ 1.9
FGFR1-223ENST00000496296 IL17REQ8NFR9 667 aa26.93■■□□□ 1.9
FGFR1-223ENST00000496296 BABAM1Q9NWV8 329 aa26.93■■□□□ 1.9
FGFR1-223ENST00000496296 KIF16BQ96L93 1317 aa26.93■■□□□ 1.9
FGFR1-223ENST00000496296 SKAP1Q86WV1 359 aa26.93■■□□□ 1.9
FGFR1-223ENST00000496296 TSPYL6Q8N831 410 aa26.93■■□□□ 1.9
FGFR1-223ENST00000496296 BRPF1P55201 1214 aaPredicted RBP26.92■■□□□ 1.9
FGFR1-223ENST00000496296 C8orf58Q8NAV2 365 aa26.92■■□□□ 1.9
FGFR1-223ENST00000496296 ELL2O00472 640 aaPredicted RBP26.91■■□□□ 1.9
FGFR1-223ENST00000496296 IPO8O15397 1037 aaKnown RBP26.91■■□□□ 1.9
FGFR1-223ENST00000496296 WDR17Q8IZU2 1322 aa26.91■■□□□ 1.9
FGFR1-223ENST00000496296 MVPQ14764 893 aaKnown RBP26.91■■□□□ 1.9
FGFR1-223ENST00000496296 TAF7Q15545 349 aaPredicted RBP26.91■■□□□ 1.9
FGFR1-223ENST00000496296 FAM161AQ3B820 660 aa26.9■■□□□ 1.9
FGFR1-223ENST00000496296 SPG7Q9UQ90 795 aa26.9■■□□□ 1.9
FGFR1-223ENST00000496296 JCADQ9P266 1359 aa26.9■■□□□ 1.9
FGFR1-223ENST00000496296 TOM1L2Q6ZVM7 507 aa26.89■■□□□ 1.9
FGFR1-223ENST00000496296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.89■■□□□ 1.9
FGFR1-223ENST00000496296 CEMIPQ8WUJ3 1361 aa26.89■■□□□ 1.9
FGFR1-223ENST00000496296 DZIP1LQ8IYY4 767 aaKnown RBP26.89■■□□□ 1.89
FGFR1-223ENST00000496296 TNNQ9UQP3 1299 aa26.89■■□□□ 1.89
FGFR1-223ENST00000496296 COL5A2P05997 1499 aaPredicted RBP26.89■■□□□ 1.89
FGFR1-223ENST00000496296 MIS18AQ9NYP9 233 aa26.88■■□□□ 1.89
FGFR1-223ENST00000496296 COL22A1Q8NFW1 1626 aaPredicted RBP26.88■■□□□ 1.89
FGFR1-223ENST00000496296 EVA1CP58658 441 aa26.87■■□□□ 1.89
FGFR1-223ENST00000496296 FTSJ3Q8IY81 847 aaKnown RBP26.87■■□□□ 1.89
FGFR1-223ENST00000496296 NOB1Q9ULX3 412 aaKnown RBP26.87■■□□□ 1.89
FGFR1-223ENST00000496296 C8orf34Q49A92 452 aa26.86■■□□□ 1.89
FGFR1-223ENST00000496296 TEFQ10587 303 aa26.85■■□□□ 1.89
FGFR1-223ENST00000496296 ATF7IPQ6VMQ6 1270 aa26.85■■□□□ 1.89
FGFR1-223ENST00000496296 OVOS2A0A0G2JMS6 1433 aa26.85■■□□□ 1.89
FGFR1-223ENST00000496296 LGR6Q9HBX8 967 aa26.85■■□□□ 1.89
FGFR1-223ENST00000496296 PCDHB15Q9Y5E8 787 aa26.85■■□□□ 1.89
FGFR1-223ENST00000496296 MEGF6O75095 1541 aa26.84■■□□□ 1.89
FGFR1-223ENST00000496296 MPRIPQ6WCQ1 1025 aa26.84■■□□□ 1.89
FGFR1-223ENST00000496296 MRPL50Q8N5N7 158 aaKnown RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms