RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 KCNQ4P56696 695 aa15.16■□□□□ 0.02
RNF220-217ENST00000496262 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
RNF220-217ENST00000496262 MTFR1LQ9H019 292 aa15.16■□□□□ 0.02
RNF220-217ENST00000496262 PAPPAQ13219 1627 aa15.16■□□□□ 0.02
RNF220-217ENST00000496262 POLR3GLQ9BT43 218 aa15.15■□□□□ 0.02
RNF220-217ENST00000496262 HSP90AB2PQ58FF8 381 aa15.14■□□□□ 0.01
RNF220-217ENST00000496262 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
RNF220-217ENST00000496262 FHDC1Q9C0D6 1143 aaPredicted RBP15.14■□□□□ 0.01
RNF220-217ENST00000496262 KIF20BQ96Q89 1820 aa15.14■□□□□ 0.01
RNF220-217ENST00000496262 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
RNF220-217ENST00000496262 DOT1LQ8TEK3 1739 aa15.14■□□□□ 0.01
RNF220-217ENST00000496262 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
RNF220-217ENST00000496262 CCER1Q8TC90 406 aaPredicted RBP15.13■□□□□ 0.01
RNF220-217ENST00000496262 FLT4P35916 1363 aa15.12■□□□□ 0.01
RNF220-217ENST00000496262 PPM1GO15355 546 aaPredicted RBP15.12■□□□□ 0.01
RNF220-217ENST00000496262 CARD14Q9BXL6 1004 aa15.12■□□□□ 0.01
RNF220-217ENST00000496262 EMILIN1Q9Y6C2 1016 aa15.12■□□□□ 0.01
RNF220-217ENST00000496262 SHANK3Q9BYB0 1731 aa15.12■□□□□ 0.01
RNF220-217ENST00000496262 NSD2O96028 1365 aa15.11■□□□□ 0.01
RNF220-217ENST00000496262 TATP17735 454 aaPredicted RBP15.11■□□□□ 0.01
RNF220-217ENST00000496262 SLC27A3Q5K4L6 730 aa15.11■□□□□ 0.01
RNF220-217ENST00000496262 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
RNF220-217ENST00000496262 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
RNF220-217ENST00000496262 INSRP06213 1382 aa15.11■□□□□ 0.01
RNF220-217ENST00000496262 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
RNF220-217ENST00000496262 ARXQ96QS3 562 aa15.1■□□□□ 0.01
RNF220-217ENST00000496262 SGIP1Q9BQI5 828 aa15.1■□□□□ 0.01
RNF220-217ENST00000496262 SYT17Q9BSW7 474 aa15.1■□□□□ 0.01
RNF220-217ENST00000496262 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
RNF220-217ENST00000496262 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0
RNF220-217ENST00000496262 CGNL1Q0VF96 1302 aa15.08■□□□□ 0
RNF220-217ENST00000496262 PNPLA7Q6ZV29 1317 aa15.08■□□□□ 0
RNF220-217ENST00000496262 PCDH11XQ9BZA7 1347 aa15.08■□□□□ 0
RNF220-217ENST00000496262 PCDH11YQ9BZA8 1340 aa15.08■□□□□ 0
RNF220-217ENST00000496262 MSH5O43196 834 aa15.07■□□□□ 0
RNF220-217ENST00000496262 POLD1P28340 1107 aa15.06■□□□□ 0
RNF220-217ENST00000496262 TNNT2P45379 298 aaPredicted RBP15.06■□□□□ 0
RNF220-217ENST00000496262 KIF24Q5T7B8 1368 aa15.06■□□□□ 0
RNF220-217ENST00000496262 MPRIPQ6WCQ1 1025 aa15.05■□□□□ -0
RNF220-217ENST00000496262 LY75O60449 1722 aa15.04■□□□□ -0
RNF220-217ENST00000496262 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
RNF220-217ENST00000496262 CYP27B1O15528 508 aa15.04■□□□□ -0
RNF220-217ENST00000496262 SLC16A10Q8TF71 515 aa15.03■□□□□ -0
RNF220-217ENST00000496262 TUBGCP6Q96RT7 1819 aa15.03■□□□□ -0
RNF220-217ENST00000496262 PALLDQ8WX93 1383 aa15.02■□□□□ -0
RNF220-217ENST00000496262 MSL1Q68DK7 614 aa15.02■□□□□ -0
RNF220-217ENST00000496262 UTRNP46939 3433 aa15.01□□□□□ -0.01
RNF220-217ENST00000496262 QSER1Q2KHR3 1735 aa15.01□□□□□ -0.01
RNF220-217ENST00000496262 HSPA5P11021 654 aaKnown RBP15.01□□□□□ -0.01
RNF220-217ENST00000496262 GPR162Q16538 588 aa15.01□□□□□ -0.01
RNF220-217ENST00000496262 MAP3K5Q99683 1374 aa15□□□□□ -0.01
RNF220-217ENST00000496262 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
RNF220-217ENST00000496262 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.01
RNF220-217ENST00000496262 COL23A1Q86Y22 540 aaPredicted RBP15□□□□□ -0.01
RNF220-217ENST00000496262 EYA1Q99502 592 aa15□□□□□ -0.01
RNF220-217ENST00000496262 POLKQ9UBT6 870 aa15□□□□□ -0.01
RNF220-217ENST00000496262 SPG7Q9UQ90 795 aa15□□□□□ -0.01
RNF220-217ENST00000496262 ANKRD26Q9UPS8 1709 aa15□□□□□ -0.01
RNF220-217ENST00000496262 TOGARAM1Q9Y4F4 1720 aa15□□□□□ -0.01
RNF220-217ENST00000496262 C5P01031 1676 aa14.99□□□□□ -0.01
RNF220-217ENST00000496262 PKD1L3Q7Z443 1732 aa14.98□□□□□ -0.01
RNF220-217ENST00000496262 NLGN2Q8NFZ4 835 aa14.98□□□□□ -0.01
RNF220-217ENST00000496262 PANK3Q9H999 370 aa14.98□□□□□ -0.01
RNF220-217ENST00000496262 EIF4A2Q14240 407 aaKnown RBP14.97□□□□□ -0.01
RNF220-217ENST00000496262 ZNF784Q8NCA9 323 aaPredicted RBP14.97□□□□□ -0.01
RNF220-217ENST00000496262 PIGBQ92521 554 aa14.97□□□□□ -0.01
RNF220-217ENST00000496262 NCAPD2Q15021 1401 aa14.97□□□□□ -0.01
RNF220-217ENST00000496262 PHF14O94880 888 aa14.96□□□□□ -0.01
RNF220-217ENST00000496262 SMIM5Q71RC9 77 aa14.96□□□□□ -0.01
RNF220-217ENST00000496262 SMARCC1Q92922 1105 aaPredicted RBP14.96□□□□□ -0.01
RNF220-217ENST00000496262 AK7Q96M32 723 aa14.96□□□□□ -0.01
RNF220-217ENST00000496262 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
RNF220-217ENST00000496262 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.01
RNF220-217ENST00000496262 CENPBP07199 599 aaPredicted RBP14.95□□□□□ -0.02
RNF220-217ENST00000496262 ITGB4P16144 1822 aa14.94□□□□□ -0.02
RNF220-217ENST00000496262 PHKG2P15735 406 aa14.94□□□□□ -0.02
RNF220-217ENST00000496262 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
RNF220-217ENST00000496262 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
RNF220-217ENST00000496262 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
RNF220-217ENST00000496262 IFNL2Q8IZJ0 200 aa14.94□□□□□ -0.02
RNF220-217ENST00000496262 GOLGB1Q14789 3259 aaKnown RBP14.94□□□□□ -0.02
RNF220-217ENST00000496262 C4BP0C0L5 1744 aa14.94□□□□□ -0.02
RNF220-217ENST00000496262 COL24A1Q17RW2 1714 aa14.94□□□□□ -0.02
RNF220-217ENST00000496262 ASAP1Q9ULH1 1129 aa14.93□□□□□ -0.02
RNF220-217ENST00000496262 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
RNF220-217ENST00000496262 SIK1P57059 783 aa14.92□□□□□ -0.02
RNF220-217ENST00000496262 MORC1Q86VD1 984 aa14.92□□□□□ -0.02
RNF220-217ENST00000496262 LINC00116Q8NCU8 138 aa14.92□□□□□ -0.02
RNF220-217ENST00000496262 FLAD1Q8NFF5 587 aa14.92□□□□□ -0.02
RNF220-217ENST00000496262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.92□□□□□ -0.021e-6■□□□□ 8.4
RNF220-217ENST00000496262 TAF1LQ8IZX4 1826 aa14.92□□□□□ -0.02
RNF220-217ENST00000496262 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.91□□□□□ -0.02
RNF220-217ENST00000496262 IGSF1Q8N6C5 1336 aa14.91□□□□□ -0.02
RNF220-217ENST00000496262 YBX3P16989 372 aaKnown RBP eCLIP14.9□□□□□ -0.02
RNF220-217ENST00000496262 HMGB2P26583 209 aaKnown RBP14.9□□□□□ -0.02
RNF220-217ENST00000496262 ATP6V1AP38606 617 aa14.9□□□□□ -0.02
RNF220-217ENST00000496262 GNPATO15228 680 aa14.89□□□□□ -0.03
RNF220-217ENST00000496262 ITPK1Q13572 414 aa14.89□□□□□ -0.03
RNF220-217ENST00000496262 AEBP1Q8IUX7 1158 aa14.89□□□□□ -0.03
RNF220-217ENST00000496262 ATG3Q9NT62 314 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms